Nothobranchius furzeri (turquoise killifish): 107377439
Help
Entry
107377439 CDS
T05163
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107377439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107377439
03009 Ribosome biogenesis [BR:
nfu03009
]
107377439
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107377439
Spliceosome [BR:
nfu03041
]
Complex A
U2 snRNP components
U2 related factors
107377439
Complex B
107377439
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107377439
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
90S particles
Helicases
107377439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
nSTAND3
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
107377439
NCBI-ProteinID:
XP_015802491
UniProt:
A0A1A8TXX8
LinkDB
All DBs
Position
sgr04:complement(43958601..44015796)
Genome browser
AA seq
732 aa
AA seq
DB search
MRRDRDRNQNRDRDRDRDRYRDRNKDKDVKSFEGPAAASMSFLSRAPIQQQINAFTGLPH
TPRYHGILKKRLQLPVWEYRETFSDILMRNQSFVLVGETGSGKTTQIPQWCVDMVRSMPG
PKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTVLKYMTDGMLLR
EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRPDLKVIVMSATLDAGKFQVY
FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEGDEGDILLFLTGQEEID
EACKRIKREVDDLGPQVGDMKTIPLYSTLPPQQQQRIFEPPPPNKPNGAIGRKVVVSTNI
AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR
LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL
NYLAALNNDGDLTQLGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRP
TEAKKLADEAKTRFAHVDGDHLTLLNVYHAFKQNHDSTQWCYDNFVNHRSLMSADNVRQQ
LSRIMDRFNLPRRSTDFNSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHP
STVLDRKPEWVLYNEFVLTSKNYIRTCIDVKPEWLVKIAPQYYEMSNFPQCEAKRQLERI
IAKLSSKDYTQY
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggatagggaccgcaatcagaacagggaccgggaccgggatcgagatcgttac
cgggatcgaaacaaggacaaggatgtgaagtcctttgaggggccagctgctgccagtatg
agcttcctcagtcgcgcccccatccagcagcagataaacgccttcactggcctgccccac
acgccgcgctaccacgggatcctgaagaaacggctgcagctgcctgtctgggagtacaga
gagaccttctctgacatcctgatgaggaaccagtcttttgtccttgtgggagaaacgggc
tctggaaagaccacgcagatccctcagtggtgcgtcgacatggtgcgatcgatgccagga
cctaagagggcggtggcctgcacccagcccaggagggtagctgccatgagcgtcgcccag
agggtggcagatgagatggatgtcatgctgggccaagaggtgggatactccatcagattt
gaggactgcagctctgccaagactgttctcaagtatatgacagatggaatgctgcttcgg
gaggctatgaacgaccccctgctggagcgttatggcgtcatcattctggatgaggctcac
gaacgcactttagcaacagacatcctcatgggcgttctcaaggaggtagtccgccaaagg
cctgatcttaaggtcatcgtcatgagcgccacgctcgatgcgggaaagttccaagtgtat
tttgacaactgcccgctgctaaccatccccggacgcacacaccccgtggagattttctac
acaccagaaccggagcgagactacctggaagcagctatccgcactgtgatccagatccac
atgtgtgagggagatgagggggacattctgctctttctcacgggacaagaggaaattgac
gaagcctgcaagcgaatcaagcgggaggtcgacgacctggggcctcaagtcggtgatatg
aaaactatccccctgtactccactctgcctccacagcagcagcagaggatcttcgagccg
cccccacccaataaaccaaacggcgccatcggaaggaaggtcgtcgtgtcaacaaacatt
gccgagacgtccctgaccatcgacggagtggtgtttgtaattgatcctggatttgccaag
caaaaggtgtataatccacgcatcagagtggaatcgctcttagtcacagccatcagcaaa
gcctccgctcagcagagagcaggtcgcgctggacgaacacgcccaggaaaatgtttccgc
ctttacacagagaaagcgtacaaaacagaaatgcaggacaacacatatccagaaatcctg
aggtctaatcttggctctgtggtactgcagctgaagaaactgggtattgatgacctggta
cactttgacttcatggatccaccagccccagagaccctgatgcgagccctggagctgctg
aactacctggcagcgctcaacaacgatggcgacctgacccaactgggctccatgatggca
gagttccccctggacccccagcttgccaagatggtcatcgccagctgcgatttcaactgt
tccaacgaagtcctctccatcactgccatgttgtcagtcccacagtgcttcgttcgaccc
acggaggccaagaagttggcggatgaggccaagacgcgctttgcccatgtcgacggggat
cacctgacactgctcaatgtctaccacgcctttaaacaaaaccacgattccacccagtgg
tgctacgataactttgtcaaccatcgctcgctgatgtcggcggacaatgtacggcagcag
ttgtcgaggatcatggaccgcttcaacctgccgagaaggagcactgatttcaacagcaga
gactattacatcaacatccgtcgagcgctggtcactggattcttcatgcaggtcgctcat
ctggagcggacaggccattacctgacggtaaaggacaaccaagtcgtccagctgcacccg
tccaccgtgctggaccgcaaacctgagtgggtgctctacaacgagtttgtgctcacctcc
aagaattacatccgcacatgtatagacgtcaaaccagagtggctggtgaaaattgccccg
cagtactacgagatgagtaacttcccccagtgtgaagcaaagcgacagttggagcgtatt
attgcaaaactctcatccaaggactatactcagtactga
DBGET
integrated database retrieval system
