Nothobranchius furzeri (turquoise killifish): 107377444
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Entry
107377444 CDS
T05163
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107377444 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107377444 (sec24d)
Membrane trafficking [BR:
nfu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107377444 (sec24d)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
107377444
NCBI-ProteinID:
XP_015802499
UniProt:
A0A8C6PY99
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Position
sgr04:42539196..42556143
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AA seq
1095 aa
AA seq
DB search
MSQQGYAAAPPYSQAQPGMGGYQGGFGASPTQPFYGHYGGPPQAVHAQPAGLVKSPGSSA
AGMAPPPLSSQCNANVQQNGAHTQRYPPPGVSAPYSQPPISNHNNMASPSPPEAQQLTNQ
MSSMNLGNYGPMKVSAPAATPFHSPASVMSPQQVTPGMQSTLLPPQMSPPQSPAASMSMG
DPPMGRQPMGGPPMGGQAMGGQPMGGPPMAGQQMGGPPMGGQAMGGQPMGGPPMAGQQMG
GPPVGGQQLGSPPIAGMSRPFPGPLPPGPGGFQQLGPGPTGPPAYPQQAGQFGGAMSGLQ
PGMPGAFPGAPGGLAGPPQKKLDPDSIPSIIQVIEDDKVRFGGQLFNTNTRGQVPPLVTT
DFTAQDQGNASPRFMRCTTYSLPCTADLAKQCQVPLASIIKPFANLPKNETPLYVVNHGE
SGPIRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNEVPVFYFQHLDHMGRRVDFYERPEL
SLGSYEFVATLEYCKNNKPPNSPAFIFMIDVSYNNIKSGLVRLICDELKTLLEKLPRQEG
AESSAVKVGFVTYNKVLHFYNVKSALAQPQMLVVSDTAEMFVPLLDGFLVDYQESKAVIC
NLLDQIPDMFADTNESETVFAPVVQAGVEAFKAAECSGKLFIFHSSMPTAEAPGKLKNRD
DKKLVGTDKEKTLFLPHKGVYEQLSKDCVAQGCCVDLFLFPSQYLDLATMAHVPSHTGGS
VFKYNNFQIQTDGDHFLRDLRKDLQKSIGFDAIMRVRTSTGFRATDFFGAVHMNNTTDIE
MAAVDCDKAVTVEFKHDDTLGEDTGALIQCALLYTTIGGQRRLRVHNLSLNCSSQLSELY
KSCETDALINFFAKSAYRAILTQPVKNVREILVNQTAHMLACYRKNCASPSAVSQLILPD
SMKVLPVYMNSLMKTSPLVGSTELPTDERAHQRQSLMTMGVEETQLLLYPRLLPLHNIDP
GSEAVPAPVRCSEERLLDSGMFLLENGHSMFLWLGQASPPDLTQNLFNVPSLAHLQDNTC
VLPELDNLLSKKIHSIISELLEKRPNSMKLQIVRQRDKPEMVFRQFLVEDKGLHGGASYV
DFLCYVHREIRQLLT
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagggttatgcagctgcacccccatactcccaggcccaaccagggatgggg
ggctaccaaggtgggtttggagcttctcccacccaaccgttctacgggcactacggaggg
ccgcctcaggcagttcatgctcagcctgcaggtttggtaaaatcccccggttcctctgct
gccgggatggcaccgcctcctttgtccagtcagtgcaacgcaaatgtccagcagaacgga
gctcatacacaaaggtaccctccaccaggtgtgtctgctccatacagtcagcctccaatc
tcaaatcataacaatatggcttcccccagccctcctgaggcccagcagctcaccaatcag
atgagttctatgaacttgggcaactatggtccaatgaaggtctccgcccctgcagccacc
ccttttcattcacctgcttctgtaatgagtccgcaacaggtgactccaggaatgcagtca
acattattgccgccccagatgtctccaccacaatcacctgcagcaagtatgtcgatggga
gacccaccaatgggaagacagccaatgggaggcccaccaatgggaggacaggcaatggga
ggacagccaatgggaggcccaccaatggcagggcagcaaatgggaggcccaccaatgggg
ggacaggcaatgggaggacagccaatgggaggcccaccaatggcagggcagcaaatggga
ggcccaccagtggggggacagcaattgggaagccccccaatagcgggcatgagtagaccc
tttccgggaccactacctccaggtcctggaggattccagcagcttggtcctggacccact
ggtccaccagcatacccacagcaagcaggtcagtttgggggcgccatgtctgggctgcag
ccaggtatgccaggagccttccctggagcaccaggaggactggctggacctcctcagaag
aaactggaccctgattctatcccgagcataatccaagtgatagaagatgacaaagtaagg
tttggaggacagctctttaacaccaacaccagaggacaggtcccacctctcgttaccact
gacttcaccgctcaggaccaagggaatgccagtccaagatttatgcgctgcaccacctac
tcgctgccctgcaccgctgatctggccaaacaatgccaagtccctctggcctccatcatc
aaaccgtttgccaatttgcccaaaaatgaaactcccctgtatgttgtaaatcatggagag
agcggcccgatccgctgcaaccggtgcaaggcctacatgtgtccctacatgcagttcata
gatggtggtcggcgttaccagtgtggtttctgcaactgtgtcaatgaagtcccagtcttc
tacttccaacaccttgaccacatgggtcggagggtggacttctacgagaggcccgagctg
tccctgggatcttatgagtttgttgccacacttgaatactgcaagaacaacaagcctccc
aattctcctgccttcatctttatgatcgacgtgtcatataacaacatcaaaagcggcctg
gtcagactgatttgtgatgagctcaagaccctgttggagaagctgcccaggcaggaaggt
gctgagagttctgcagtcaaagtgggctttgtcacctacaacaaggtgctccacttctac
aacgtgaagagcgcgttggcccagccacagatgttggtggtgtcggacacggccgagatg
tttgtcccgctgctcgacgggttcctcgtggactaccaggagtcgaaggccgtcatctgc
aacctcctggaccagatccctgacatgtttgcagacaccaacgagagcgagacggtcttt
gccccggtggttcaggctggcgtggaggcgtttaaggcggcagaatgcagcggaaaactc
ttcatcttccactcgtcgatgcccacggccgaggcgccgggaaaactaaagaacagagat
gataagaagctggtcggcaccgacaaggagaagaccctgtttctgcctcacaaaggtgtg
tacgagcagctgtctaaagactgtgtggcccagggctgctgtgtggatctcttcctgttc
cccagccagtacctggacctggccaccatggcccatgtgccgtcacacaccgggggctct
gtcttcaagtacaataacttccagatccagacagacggggaccatttcctcagggatctg
aggaaagacttacagaagagcatcggcttcgacgccataatgagagtccgaaccagtaca
ggcttcagagccacggatttcttcggagccgtccacatgaacaacactacggacatcgag
atggcggctgtggattgcgacaaagctgtgacggtggaatttaagcacgacgacacgctt
ggagaagacacgggcgcccttattcagtgtgccttgctgtacaccaccatcggtgggcag
cgacgtctccgcgtccacaacctgagtctgaactgcagctcgcagctgtcggagctgtat
aagagctgcgagaccgacgcgctcatcaacttcttcgccaaatcagcttaccgagccata
ctgacccaacctgtgaaaaacgtgagggagatcttagtgaaccagaccgcccacatgcta
gcctgctacaggaagaattgtgccagcccgtcagctgtcagccagctcatcctgcccgat
tccatgaaagtgctccccgtctacatgaacagcctgatgaagacgtcccctctagtgggc
agcaccgagctccccaccgatgagcgggcccaccagaggcagtccctcatgaccatgggg
gtggaggagacgcagctgcttctctatccacgtctcctccctctgcacaacatagacccc
ggcagcgaggcggtgccggctccagttcgctgctcagaggaacgtctgctggattccggc
atgttcctgctggaaaacgggcattccatgtttctgtggctcggacaagccagcccaccg
gacctcacccagaacctcttcaacgtgccgtctctggctcatctacaggacaacacgtgt
gtgctgccagagctggacaacctgttgtctaagaagatccactccatcatcagtgagctt
ctggagaagagaccaaactccatgaagctccagattgtgaggcagagagataaaccagag
atggtgtttcgccagttcctggtggaggacaaaggtctgcacggcggggcctcctacgtg
gacttcctgtgctatgttcacagagagatcaggcagctgctcacttaa
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