Nothobranchius furzeri (turquoise killifish): 107377564
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Entry
107377564 CDS
T05163
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107377564
Membrane trafficking [BR:
nfu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107377564
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
107377564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_Vps41
Synaptobrevin
VPS8_N
CFAP43_N
Beta-prop_Aladin
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
107377564
NCBI-ProteinID:
XP_015802731
UniProt:
A0A1A8VGR2
LinkDB
All DBs
Position
sgr04:complement(47893474..48032833)
Genome browser
AA seq
1142 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSPTPSVQVGPQENHLVQETLQSEHFQLCKTVRHGFPYQPSAMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALTDDSVHL
WNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYIGTERGNVHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPVQTITPHGKQPKDGKKPESCKPILKVEYKTTR
NGDPFIIFSGGLSYDTVGRRPCLTVMHGKSVAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYSEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTDVSDEDPFAIQIMTWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDTDSPDGGGGGGEQTAAHPTPGAFPQTSGPPSHPSTSSNNSDGGNIPCLKVR
STPLKQSPGYQVDLVVQSVWVSGEPPQPITSLALSSSYGLVVFGNSNGLVVVDYIQKTVV
LNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSTTSEDRCKSPTSVLLSHSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
EAREAVSSFHFCEGFARKGDSTLTPCLYVGTSLGTLLVLALTLPPAGEQRQLQPVIISPT
GVLVRLKGSIMRMAFLDSTGILLTSAFEPWFEPNVTADEEREKVRKRRPVSVSPSTTQDF
NESQFAVVCSEKQAKVISLPSQTCIYKHSITETSFILRADIVQMNPGVCVACFCANGHIM
TLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQETCENLQEM
LGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGELAAGKASRSLAQHIPGPGGIEG
MKGAASGVVGELARARIALDERGQKLGELEERTAAMMASADSFSKHAHDMMLKCKDKKWY
QF
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacgggctgaaagaggcgtcctcccccacg
ccgtccgtccaggtggggccacaggagaaccatctggtccaggagacgctccagtccgag
cacttccagctctgcaagactgtacgtcatggcttcccttatcagccatcagctatggct
ttcgacccggtgcagaagatcctggccatcggcacccagagtggagctctcagattgttt
ggtcgtccgggggtggagtgctactgtcagcatgagagcggagcagctgtcatccagctg
cagtttctcatcaacgagggcgcgctggtgagtgctttgacagatgacagcgtccatttg
tggaacctgaggcagaagagaccggcgatcctccattcgctcaagttcaacagagaaaga
ataactttctgccacctgccattccagagtaagtggctgtacatcggaacagaacgagga
aatgtccacattgtcaacgtggagtccttcatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcatcctggaccagttgtacacataagtgataac
ccaatggatgaaggaaagcttataattggatttgagtcggggattgtggtcctgtgggat
ctgaaatcaaagaaggcagactaccgctacacttatgatgaggctatccactcagttgcc
tggcatcatgagggcaagcagtttatttgcagtcactcagatggaactctgaccatatgg
aacatcaggggtcaaggcaagccagtccagacaatcacgccacatggaaaacagcccaag
gatggaaaaaagccagagtcgtgtaaacccattcttaaggtggaatataaaacaactaga
aatggggaccctttcataatcttctctgggggtttgtcctatgatacagtgggtcggcgg
ccttgtctgactgttatgcatggaaagagtgttgctgtactggagatggattatccaata
gtagactttctcactttatgtgagacaccatatcctaacgattttcaggagccttacgct
gtggtggtccttttagaaaaagatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgagaacccgtaccccctgaccatccacgagtcccccgttacctgctgtgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcgcggcagaaa
cgacagggctacagcaaaaaggaatggccgattagtggtggaaactggggtcaaggcaca
caaagctactcagagatcatcataactgggcatgctgatggaactgtgaagttctgggat
gcctctgcaataatgctccaggtgctctataagctaaaaacagccaaggtatttgacagg
aaccggtcaaaggaagacaagggcagcactgatgtgtcagacgaagatccctttgccatt
cagatcatgacctggtgcccagagagccggatgctctgtgtggccggcgtgtcagccaac
gttatcatctaccgcttcagtaagctggaagtaaccaccgaggtggtacagttactggag
gtgcgaatgcagtacgagctgaacgacacagactctccagatggcggaggtggtgggggt
gagcagacggcggcgcatcccacccccggtgccttcccccagacgagcggcccgccttca
cacccttccaccagcagcaacaactctgacggaggcaacataccttgcctcaaagtacga
agtactcctttgaagcagtcacccggttaccaggtagatctggtggtccagtcagtgtgg
gtgagtggagagcctcctcagccaatcacaagtctggcgctcagttcctcctacggtcta
gtggtgtttggcaacagcaacggtctggtggtggtggactacatccagaagacggtagta
ctcaatttgggaacggtggagctttacggatccaatgacccctaccagagacagcctcgg
tcaccaaggaaaacacgacagccgtcaggaggtctgtgtgatatcaacgaaggctcaacc
acctcagaagaccgctgcaagtctcctacttcagtgttgttgtcacacagcaatcttcaa
cagttctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtccgtgtgcccgccacggggtgctaacccatta
gaccaccgggacaactcttttagccgctcgcgctcctccagcgtcaccagcatcgacaag
gaagcgcgggaagcagtcagctccttccacttctgtgaggggttcgcccggaagggagat
agcaccttgacaccctgcctttatgtgggcacctccctgggaactttgctggtcttggct
ctcacgttgccaccagctggggagcagcggcaactgcagccggttattatttcaccaaca
ggtgtgttggtgcggctgaaagggagtatcatgcggatggctttcctggactccacaggc
atcctgctgacatctgcatttgaaccatggttcgaacccaacgtcacagcggatgaagag
agagaaaaggtccgcaagcgtcgacccgtctccgtgtcgccctccaccacccaggacttc
aacgagagccagttcgctgtggtgtgctctgagaaacaggccaaagtcatttccctcccc
tcccagacctgcatctataagcacagcatcacagagacctccttcattctacgggctgac
atcgtgcagatgaacccaggcgtgtgcgtggcttgcttttgtgccaacggccacataatg
accctcagtgtgccgggactgagaccgctcatggatgtcaactacctacctttgacggac
atgcgaatagccaggacgttctgcttcaccaacttgggccaggccatgtacctgtgctcc
cctactgagatccagaggatcacgtacagtcaggagacatgtgaaaacttacaggagatg
ctgggtgaactttttactccagtggagacaccagaagcacccaacagaggcttcttcaaa
ggcctgtttggaggaggagctcagtcgctggacagagaggagctatttggtgagctagca
gctggaaaagcgtcccggagtctggcccagcacattcctggccctggcggtatcgaaggg
atgaagggggctgcatcaggagtggtgggagagctggctcgtgctcggatagcgttggat
gaaagaggacagaagctgggagaactggaggagagaacggctgccatgatggccagtgct
gactctttctccaaacacgcccacgatatgatgctgaagtgtaaagacaaaaaatggtac
cagttctga
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integrated database retrieval system
