Nothobranchius furzeri (turquoise killifish): 107377978
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Entry
107377978 CDS
T05163
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03420
Nucleotide excision repair
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107377978 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
107377978 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107377978 (cul4b)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107377978 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107377978 (cul4b)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
107377978 (cul4b)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107377978 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
107377978 (cul4b)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107377978 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
CCDC85
NurA
Motif
Other DBs
NCBI-GeneID:
107377978
NCBI-ProteinID:
XP_015803450
UniProt:
A0A1A8UQH6
LinkDB
All DBs
Position
sgr01:37582757..37654148
Genome browser
AA seq
861 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEAKPADVKNDSGNITSTKKRKINGSEREDTSDTISSSPPKTLN
SSSSSCSPTSLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAASCSNNKSKAMFLAGGVGH
HANGLTKTAGSATFSSSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAVEAIQNSTS
IKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQINQFREDALDSVLFLKKIDKC
WQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILL
LIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFELRFLEETNRLYAAEGQRLMQEREMPE
YLHHVNKRLEEEADRVITYLDQSTQKALIATVEKQLLGEHLTAVLQKGLTHLLDENRIQD
LSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDV
CFLKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMI
IFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDM
ELSKDIMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATG
IEDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETV
EEQASTTERVFQDRQYQIDAAIVRIMKMRKSLSHNLLMSEVYNQLKFPVKPADLKKRIES
LIDRDYMERDKENSNQYNYVA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaaa
cctgcggatgtcaaaaacgacagcggtaacatcacatcgacgaagaagaggaaaattaac
ggctccgagagggaagacactagtgacacaatctcatcttcgcctcccaagaccctgaat
tcctcctcctcctcttgctcccccacttcgctgcacattcagaagaagttgaggtttgag
gattcagtggatttcattggactggatgtgaaaatggctgaggaggctgccgccgccgcc
gctgcttcgtgctccaacaacaaaagcaaagccatgttcctggctggcggcgtggggcac
cacgctaacggactgaccaaaaccgcaggatccgccaccttctccagcagtaaacccggt
gctgccaagaaattagtcatcaaaaacttcagagaaaagcccaaattgcccgaaaactac
acacaggagacctggcaaaagctaaaagaggcggtggaggcgatacagaacagcacatca
atcaagtacaatctagaggagctctaccaggccgtggaaaacctctgctcccacaagata
tccgccaaactttacaaacagctgagggccgtgtgtgaggaccacatcaaggcacagatc
aatcagttcagagaggatgccctggatagcgtgcttttcctaaagaaaattgacaagtgc
tggcaagatcactgcagacaaatgattatgattaggagtatatttttgtttttggatcgc
acctacgttttacaaaattcaatgctgccatcaatctgggacatgggcctggagctgttc
aggttctacatcatcagcgatctgaaggtccagagcaaaaccatagatgggatcctgctg
ctgatcgagagggagcgaaatggagaggccatagaccgcagcctcctgaggagcctgctg
agcatgctctctgaccttcagatttatcaggactcctttgaactgcgcttcttggaggaa
acgaatcgcttgtatgctgcagagggacagagactgatgcaggaaagagagatgccagaa
tatctccatcatgtcaacaaacgcttggaagaggaggctgacagagtaatcacatatctg
gaccagagcacacagaaagcgctcattgctacagtggagaagcagctgctcggtgaacat
ctcactgctgttctacagaaagggctgactcacctgctggacgagaacagaattcaggat
ctgtctcttctctatcaactcttcagtcgagtgcgaggtggcgttcaggtgctcctgcag
cagtggattgaatacataaaggcatttggaagcacaatcgtaatcaacccggaaaaagac
aaaacaatggtgcaagagctgctggacttcaaagacaaggtggatcacatcatcgatgtg
tgtttcttaaaaaatgagaagtttgtcaatgccatgaaggaagcttttgagacgttcatc
aacaaaaggccaaataaaccagcagaacttattgcaaaacatgtggattcaaagctgagg
gcaggaaacaaagaggcaacagacgaggaacttgagaagatgctggataagatcatgatt
atctttagatttatctatggaaaggatgtctttgaggcgttttacaaaaaggatctggcc
aagaggctgctggttggaaaaagtgcctcggtggatgctgaaaaatcaatgttgtcaaag
ctgaaacatgaatgtggagcagcgttcaccagtaaactggagggaatgttcaaggacatg
gagctttctaaagacataatggtgcagttcaagcagcacatgcagtgccaaaacattcct
ggcaacatcgagctgaccgtgaacatcctcactatgggttactggccaacgtatgtcccg
atggaggtccacctgccgcccgagatggtgcgactgcaggagatattcaagactttttac
ctgggcaagcatagtggcaggaagctacagtggcaatcaacgttgggtcactgtgtccta
aaagctgaattcaaagagggcaagaaggagctacaggtgtccctttttcaaacccttgtg
ctgcttatgtttaacgaaggagaggagttcactctggaggagatcaaactagccacagga
atcgaagacggcgagctgcgccggacgctgcagtcgcttgcatgtggaaaagcacgagtc
ctcaccaaaatcccaaaaagtaaagatgtggaggatggggacaagttttcttgcaacgat
gactttaaacacaagctgttcaggatcaaaataaaccagattcagatgaaagagacggtg
gaggagcaagccagcaccacggagagggtctttcaggatcgccagtaccagatcgacgca
gccattgttcggataatgaagatgaggaaaagtctgagccataatcttttaatgtctgag
gtgtacaaccagctcaagttccctgtcaagcctgctgatctaaagaagaggatagagtct
cttattgacagagactatatggaacgcgacaaggagaactccaaccagtacaactatgta
gcctaa
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