Nothobranchius furzeri (turquoise killifish): 107377983
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Entry
107377983 CDS
T05163
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04140
Autophagy - animal
nfu04148
Efferocytosis
nfu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107377983 (vps18)
04148 Efferocytosis
107377983 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107377983 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107377983 (vps18)
Membrane trafficking [BR:
nfu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107377983 (vps18)
Hops complex
107377983 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf_RING_Vps8
zf-RING_16
zf-RING_11
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
DUF1664
zf-RING_UBOX
DUF2175
DUF4446
Motif
Other DBs
NCBI-GeneID:
107377983
NCBI-ProteinID:
XP_015803453
UniProt:
A0A1A8ARU5
LinkDB
All DBs
Position
sgr04:64231144..64236581
Genome browser
AA seq
982 aa
AA seq
DB search
MSSILDEYEDSQNLRQGSQPHTRLSPANIGLTHSGFVNVRLEEEKPIFTKQRIDFAPPEK
INHLAVCSNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKDDSKVHRLFLDPTGFHLLISL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISV
IEGSLFNTNPDQYFRQVHSLEEDGRPAPVCCLEVERGPENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFNQNQDLLPSFQEFPANMGYSEITFYTAKLRSVPSAFAWMMGNGVLYGQ
LDYIRPDSLLSDVQVWEYTPDIDIIHDKPHSIVLTQFHFLLLLRDRVKAICTLNGQVVYE
DVFPDKFGSLKRMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECTDMVLAREAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LDNLKPSERTQITLLVTWLVELYLNGLGQLESDGNTVIFQETREEFRNFLSSSKHRDCLY
NNRSTTYDLLASHGNVDDMVYFSVIMQDYERVISHYCQNDNFTAALDVLAKHCDEKLFYK
FSPVLMQNIPKSVVDAWIRMGKRLDPKKLIPALMNYSQMGNTQQINETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHPSEIHYDLKYALRLCAEHGYLQACVLVY
RIMELYEEAVDLALQVDVDLAKRCADLPEDDEEVRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIDDLKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCASCDFPLLNRSFYLFLCGHAFHYDCLFQEVTPHLSAFKQNRLEE
LQKKLAATAQSTKSRHRPALKEEGDTSSLGKGSMGASREQIISDIDDIVAAECAYCGELM
IKSIDKPFIDPQKFEQEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattctcgatgagtatgaggactctcagaacctgagacaaggttctcagccg
cacacccggctatctcctgctaacatcggcctaacgcattcaggcttcgtgaatgttaga
ctcgaagaagagaagccaatatttaccaaacagaggatcgattttgctccacctgagaag
ataaaccatttggcagtctgcagcaaccagctgtgcatgagtctgggaaaggacactttg
ttaaggattgacttggccaaaccagaccagcctaatcagattgaactaggaaggaaagat
gacagcaaagttcacaggttgttcttggatccaacaggctttcatctactgatcagcctg
agcaccagcgagtgtctgtacctcaacaggaacacccagaaggttcgcagtctgtcccga
tggagaggccacctcatcgagagtgtgggctggaacaagctgctgggcaatgagaccagc
acaggacccatcctggttggcaccagtcagggcatcatctttgaggctgagatctccgta
atcgagggaagtctgttcaacaccaatccggaccagtactttagacaggttcactccttg
gaggaggatggcagacctgcaccagtctgctgcttggaggtcgagcgaggtccagaaaac
aaatatttcatcatagcaaccacccgcaaacggctgtttcagtttgtgggtaaagtagct
gaagggtccgagcagcaaggctttagctccatcttcaaccagaaccaggacctgcttccc
agttttcaggagttccctgccaatatggggtacagcgagatcacgttctacacagcgaag
ctgcggagcgtccccagtgcattcgcctggatgatgggaaacggggttctgtatggtcag
ctggactacatcaggcctgattcccttctgagtgacgttcaggtttgggagtacactccg
gacatcgacattattcacgacaaaccccattccatcgtgctgacgcagtttcacttcctg
ctcctgctccgtgaccgagttaaggccatctgcacactgaatggacaggtggtgtacgag
gacgtgttcccagacaaatttggctccctcaaacggatgatcaaagatcccgtgggtggg
ttggtgtggatctacacagaacgggctgttttccgctatcacatccagcgcgaggccagg
gatgtgtggcagatgtacatgagcatgaataagttcgatctggccaaagagtactgccgt
gaccggcccgagtgcacggacatggtgctggctagagaggctgagcactgcttccagaac
aagcgctacctggagagtgccaagtgctacgcgctgacgcagaactactttgaagagatc
gcgctgaagtttatcgaagccaagcaggaggaggccttgaaggagtttttactgaagaaa
ctggacaacctgaaacccagtgagaggacgcagatcaccttgctggtcacctggttggtc
gaactctacctgaacggcctcgggcagctggagagcgacggaaacaccgtcatcttccag
gaaacgcgagaggagttccgcaacttcctgagcagctccaaacacagggactgcctgtac
aacaaccgtagcaccacctacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctccgtcatcatgcaggactacgagagagtgatatctcactactgccagaatgac
aacttcaccgcagctctggacgtgcttgccaagcactgtgatgaaaagctgttttacaag
ttctcccccgtgctcatgcagaatattcccaaaagcgttgtggacgcgtggataaggatg
ggcaagaggctggatccaaagaagctcatcccggcgctgatgaactatagccagatggga
aacacccagcagatcaacgaaaccatccgttacatggagttctgcgtgtacgagctgaac
gtgacggaggaggccattcataactacctgctgtcgctttatgccaagtacaagccagac
tctttgttgtggtacctggaacaggcgggcacacacccctcggagatccactatgacctg
aagtatgccctcaggctgtgtgcagagcacggctacctccaggcatgcgttctggtgtac
aggatcatggagctgtatgaggaggcagtggatctagctttacaagtggacgtagacttg
gccaagagatgcgctgacctgcccgaggacgacgaggaggtgaggaaaaaactttggctg
aagatcgccaggcatgtggtgcaggaggagaaagatgtgaagaaagccatgaactgtctg
tccagctgcaacctgctcaagatcgaagacatcctgcctttctttcccgactttgtcacc
attgaccactttaaggaggccatttgcagttccctggaggagtacaacaagcacatcgac
gatctgaaacaggaaatggaggaggccacagagagcgctaaaagaatcagagaagacatc
caggaaatgaggaacaagtatggtgttgtggattcccaagaaaagtgtgcttcgtgtgac
ttcccattgctcaacagatccttttatttgtttctgtgtggacacgcgtttcactatgac
tgcctgttccaggaagtgacgcctcatttatcagccttcaagcagaatcgccttgaagag
cttcagaaaaagctggctgcaacagcgcagtccactaaatctcgccaccgccctgcgcta
aaggaagaaggagacacttccagcctggggaagggctctatgggagcaagtcgtgagcaa
ataatatcggacatcgatgacattgttgcggctgagtgcgcttactgcggcgaactaatg
atcaagtccatcgacaagccattcattgatccgcagaagtttgaacaagaaaaatccagc
tggctgtga
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