Nothobranchius furzeri (turquoise killifish): 107378255
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Entry
107378255 CDS
T05163
Symbol
hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107378255 (hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107378255 (hnrnpu)
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
hnRNP proteins
107378255 (hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
CPT
AAA_17
AAA_22
AAA_18
Zeta_toxin
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
107378255
NCBI-ProteinID:
XP_015803844
UniProt:
A0A1A8A120
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All DBs
Position
sgr04:complement(74691401..74699791)
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AA seq
799 aa
AA seq
DB search
MSTINVKKLKVNELKDELKKRNLSDKGLKADLMDRLQAALDEEALAGDSAAQDVATDEQA
ADIQEGMGEEEEGPVEESMEANEGEEPANDGDGNGVSVDEEMGEGEEEGDEEDEMDPMLK
EDVDDMEKIDTEDGEPGDHATEGDADKDTNADQKNKKGVKRRREEHGRGYFEFIEENKYS
CASFKSPVPPLEEEDEELDETKVCLDSYNCDLHFKVSRDRYSASSLTMESFAYLWSGGKA
THGVNQGKACFEMKVTEKIPVKHISSKNLEIHDVQVGWSLATGSLLLGEEEFSFGYSWKG
KKTTNCVTEDFGEPYEENDVICCLIDFEGEEVVLSFSKNGGEPAVAFQVQKDSLNGQALF
PHVICRNCAVEFNFGQMETPYFPQPEGYTFMQQIPVDERVRGVKGPQTKADCEIIVMVGL
PGSGKTTWVKNQVQQNPGKYYILGSDTIVDKMMINSLKRQSKDITKLSTISQRAPLFLGK
FIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFKRKAVVVCPSDEEYKQRVQKKVESDG
KDVPEHALLKMKGFFALPEEGDSFSEVVYAELPKADAAKLLDQYKEESKSALPAEKKPNQ
GSTAPKRGGGPRGGGRGGKNQFGRGGGPGQRGGGRGGFQNRGNFRGAPGPRGGFSRPPRG
FLPPPAFRGGFPNRGSFSRGGAPIPSLGGSPRGGPMRGNMGHRGGPMNRGGQMNRGGQMN
RGGGGNMSRNPNRGHPSQFQPRGGNRGNFGNKNSFGNSRNSGNFGNRNGMDKAQAFNQSW
QQGFWNQKRWSQQYQPGYY
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgattaacgtgaagaagcttaaagtaaacgagctaaaagacgagctcaagaaa
cgaaacctatcagacaaggggctgaaggccgatctgatggaccgcttgcaggccgcgctg
gacgaggaggccctcgctggagactcggccgctcaggatgtggcgacggacgagcaggcc
gcggacatccaggagggtatgggggaggaagaagaaggcccggtagaggagagcatggag
gccaacgagggagaagagccggcgaatgacggcgacgggaacggtgtgtcggtggacgag
gagatgggtgagggggaagaggaaggtgacgaggaggacgagatggatcccatgctaaag
gaggatgtagacgacatggagaaaattgacacagaagatggtgagcccggcgatcacgct
actgagggagatgcggacaaagacacgaatgctgatcagaagaataagaagggtgttaag
agacgccgggaggaacatggaaggggctactttgaatttattgaagagaacaaatacagc
tgtgcttcgtttaagtctccggtaccgcccttggaggaagaggacgaggagcttgatgag
accaaagtctgcctggacagctacaactgcgacctgcacttcaaggtgtcgcgggaccgt
tacagcgcttcgtccctcacgatggagagcttcgcgtacctctggtctggaggcaaggcc
actcacggtgtaaaccaaggcaaggcttgctttgagatgaaggttacagagaagattcca
gtgaagcacatatccagcaagaacctggagattcacgatgtccaggtcggatggtctctg
gctaccggctcgctgctcctaggtgaggaggagttttccttcggctactcctggaaaggc
aagaagacgaccaactgtgtgaccgaggacttcggagagccgtacgaggagaacgacgtc
atctgctgcctcatcgactttgagggtgaggaggtggtgctgtccttctccaagaatggt
ggagagccagctgtggccttccaggtccagaaagactctctaaacggccaggcccttttt
cctcacgtcatctgtcgcaactgtgctgtggagttcaactttggccagatggagaccccg
tacttccctcagcctgagggctacaccttcatgcagcagatccccgtcgatgagcgtgtg
aggggtgtgaaggggcctcagaccaaggccgactgcgagatcatcgtgatggttggtctg
ccaggctcaggcaagaccacatgggtgaagaaccaggtccaacagaaccctgggaagtac
tacatcctgggaagtgacacgattgtggacaaaatgatgatcaacagcctgaagcgccag
tccaaggacatcaccaagctcagcaccatttcccagagagcgcctctcttcctggggaag
ttcatcgagatcgccgcccgcaagaagaggaactacatactagaccataccaacctgtct
gcacccggccagaagaggaagatgtgtctgtttgccggcttcaagcgtaaagctgtggtg
gtctgtccgtctgacgaggagtacaagcagagagtccagaagaaggtggagagtgacggc
aaagatgtgccggagcacgctttgctcaagatgaaaggcttcttcgctctgccggaggag
ggcgacagcttcagcgaggtcgtctacgctgagctgcccaaggcggacgccgccaagctg
ctggaccagtacaaagaggagagcaagtcggccctgcccgccgagaagaagcccaaccag
gggagcacggcgccaaaaaggggcggtggcccgcgtggtggcggccggggaggcaagaac
cagtttggccgtggtggtggacctggacagaggggggggggtcgtggaggcttccagaac
agaggcaacttcagaggagctcctggcccccgtggtggcttcagccgtcctcctcgtggc
ttcctgcctccgccggcctttcggggggggttccccaaccgcggcagcttcagccgtggc
ggcgcccccattcccagtctgggaggctctccaagaggcggtccaatgaggggtaacatg
ggacacaggggcggacccatgaaccgtgggggtcagatgaaccgtgggggtcagatgaac
agaggaggcggaggcaacatgagtcggaatccaaaccggggtcatcccagccagttccag
cccagaggtggtaaccgtggcaactttggcaacaagaacagctttgggaacagcaggaac
agtgggaactttggcaacaggaacggcatggacaaggcccaggcctttaaccagagctgg
cagcaagggttctggaaccagaaacgctggagccagcagtaccagcccgggtactactga
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