Nothobranchius furzeri (turquoise killifish): 107378384
Help
Entry
107378384 CDS
T05163
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
nfu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107378384 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107378384 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107378384 (mgrn1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107378384 (mgrn1)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107378384 (mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107378384
NCBI-ProteinID:
XP_015804060
UniProt:
A0A1A8A0E3
LinkDB
All DBs
Position
sgr05:complement(3784217..3791343)
Genome browser
AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTSGEEGVKPKVQYSV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPTMVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHILLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSLPP
GFEPISLLEALNGLCSVSPPIPSAPLYDEINFSGGLGGDNRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTRLSSSPAPTDATAVEDVAESLSPDDEDR
MHSGGDIVQDCSSERCSLTKTESDPAGDLSLPGSSESIESLKSQSTNCSSHPLLCPTSSL
HLEDEHFSP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagccgcaggattgctggagtggaggacatcgatatccaggccaac
tctgcctatcgatttcctccgaaatctgggaattactttgccagccatttctttatggga
ggagagaagtttgacacgccacatccagagggatacctctttggggaaaacatggacctg
aattttcttggaaacaggcctgtgcagttcccgtatgtgacacctgcaccccacgaaccc
gtgaaaaccctcaggagcctggttaacatcagaaaggactctttgcgtttagtcaggtat
aaagatgactctgacacctcaggggaggagggtgtaaaaccgaaggttcagtacagtgtg
gagtttacctttgacgctgacgctcgggtagccatcaccctctactgccaagcgtttgag
gaattctccaatgggatggccgtgtacagcccaaaagatcccaccatggtctctgaaact
gtgcattacaagagaggagtgagccagcagttctccatgccatcatttaaaatcgatttc
agcgagtggaaagaggaggatctgaattttgacctggaccgaggagtgttccccatggtc
atccaagctgtggttgacgaaggagacgattgtcttggacacgctcacatacttttggca
gcatttgaaagacatgttgatggcagtttctccgttaaaccactgaagcaaaagcaaata
gtggatcgtgtgagctacctcttacaggaaatctatgggatcgagaacaaaaacaaccaa
gaaactaagccttctgatgatgagaacagtgacaacagcaacgagtgtgtggtctgtctg
tccgacctgcgggacacactcatcctgccctgcagacatctgtgcctctgcaactcctgt
gcagacaccctccgttaccaggccaacaactgtcccatctgcaggctgccctttagagcc
ctgctgcagatcagagcggtgaggaaaaagcccggagctctgtcccctgtctccttcagc
ccagttctcgctcaaaccatggaccacgatgagcactcgagcacagactcgctccctcct
ggttttgagcccatctcgctgctggaggctctgaacggtctgtgctcggtgtctcctccc
atcccgtctgccccactttatgatgaaatcaatttctcggggggtctgggtggggacaac
cgacagctgagctcaccagagcatttaagtgatggaagcctgcagaaaggaaaagtcagc
aagtcacccgacagcaccctcagatcgccgtcctctcccatccaggaggaagatgaggag
aagctttctgagatgtcagacgctcagccacacacacgtctctccagcagccccgccccc
acagacgccacagcagtcgaagacgtggccgagtctctttctccagatgatgaggacagg
atgcattctggaggagacatcgtgcaggactgcagcagcgaacgctgcagcttgaccaaa
acagaaagcgaccctgcgggtgatctttctctgcctggttcttcagagtcgatagaaagt
ctaaaaagtcagagcacaaactgctccagccatcctctcctgtgtcccacaagcagcctt
catttggaagatgaacacttcagcccctga
DBGET
integrated database retrieval system
