Nothobranchius furzeri (turquoise killifish): 107378488
Help
Entry
107378488 CDS
T05163
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecule (CAM) interaction
nfu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107378488 (lrrc4b)
04517 IgSF CAM signaling
107378488 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107378488 (lrrc4b)
Cell adhesion molecules [BR:
nfu04515
]
Immunoglobulin superfamily
NGL family
107378488 (lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
LRR_9
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107378488
NCBI-ProteinID:
XP_015804209
UniProt:
A0A1A8AQZ0
LinkDB
All DBs
Position
sgr05:complement(8670048..8722932)
Genome browser
AA seq
729 aa
AA seq
DB search
MRIATLTCLPGPSPLLILLAHLLLRLLLAGPELVGAASPCPSLCTCSNQASRVICTRQSL
DEVPESISVNTRYLNLQENSIQVIKSDTFKQLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFIRVSSLRRLDLGELKKLHF
ISDAAFAGLINLRYLNLGMCGLKDIPKLTPLERLEELELSGNRLEIIRPGSFQGLVALRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADPSSISFFTTVTVETEGGGGHDYAQFPINETFIHVQPGSTP
SVQWRAGLSTTDSSLSTGWSSSSSHTTRPTFTVPITVPSSPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGGSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKSHHFNNNMMGLGMGTGLNNNNNP
SPCSQSQNMSCSQVSTTGGVTPICGTLPSPIPLPQLGLHSSLKGLMGKGQNEPLLFKNGS
KENVQETQI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccctcctcattttattggcc
catttgctgctgcggctcctcctcgctgggccggagttagtgggagccgcctcgccctgc
ccgtcgctctgcacgtgctccaaccaggccagccgagtcatctgcaccaggcaaagcctg
gacgaggtgcccgaaagcatttcggtcaacacgcgatacctcaacctgcaggagaactcc
atacaggtcatcaagtcagacactttcaagcaattgaggcaccttgaaatcctccagctt
tccaagaatcagatacggcagattgaggttggagcattcaatggcctccccaaccttaac
acgctggagctctttgataaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgagagctgtggctgcgcaacaaccccattgagacacttccaggctatgcc
ttcatccgcgtgtcctcgttacggcgcttggacctgggggagctcaagaagttgcatttc
atctccgatgcagccttcgcgggcctcatcaatctgcggtacctgaacctgggcatgtgt
gggctgaaagacattcccaaacttacgcctcttgagcgtttggaggagctagagttatct
ggaaatcgtttggagattattcgccccggatccttccaaggattggtagctctacggaag
ctatggctgatgcactcacaggtgtctgtcatagaacggaatgcttttgacgacttaaaa
agcctggaggagctcaatttgtcccataattccctgcactccctgccccatgatcttttc
acacctctccaccagctggagagggtacaccttaaccacaatccctgggtttgcaactgt
gatgtgctttggcttagttggtggttgaaggagaccgttcccagcaacaccacctgctgc
gcccgctgtcatgctcctcctgtattgaagggcaagtacattggagaacttgaccaaagc
cactttacctgctttgcgcctgtcattgtggagccacctacagatttgaatgtcacagaa
ggtatggctgctgagctgaaatgtcgcaccagcacatcaacaacttctgtcaactggatc
accccaaatggcacattaatgacccacgggtcttaccgtgtgcggatatccgtcctgcac
gatggcacgctaaacttcacaaatgtcaccctgcgagatacgggtcagtacacctgcatg
gttactaatgctgctggaaataccactgctacagctgttctcaatgtcactgctgctgat
cccagcagtatcagtttctttacaacagttaccgtggaaacagaggggggtggaggtcat
gattatgcacagtttcccattaacgagaccttcattcatgttcagcctggctccacccct
tctgtccagtggcgtgcaggcctttcgaccacagactcttctctgtccaccggctggtcc
tcctcctcttcccatacaactcgacccactttcactgtgccaatcactgtgccatcatca
ccaggcttctcaggcctggatgatgtgatgaagaccaccaagattatcattggttgcttt
gtagccattacgtttatggcagcggtgatgctggtggtgttctacaagctgaggaagcag
caccagctgcacaaacatcacggtcctgctcgtgctattgagatcatcaatgtggaggat
gagctgggtgctggggccagtggtcggggcagtgggatctctggaggctccactgtgacg
caaagtggaggcagtggaataggtggaggtcagagcctcaggctgcaccacccagagata
gtcaacttacccaacctggctcgatcggagcaccttaaccactactacaaatcacatcac
ttcaacaacaacatgatgggcctgggaatgggcacgggcctcaacaacaacaacaacccc
tcaccgtgctctcaatcacagaacatgtcttgctcccaggtttcaaccaccggtggggtg
acgccgatatgtggcaccctgccctcccccatccccctgccccagttgggccttcacagt
tctctgaaaggcctaatggggaaaggccagaatgagccgctactttttaagaacggctca
aaggaaaatgtgcaagagactcagatctaa
DBGET
integrated database retrieval system
