Nothobranchius furzeri (turquoise killifish): 107378492
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Entry
107378492 CDS
T05163
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1
KO
K02620
transcription factor 7
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04310
Wnt signaling pathway
nfu04520
Adherens junction
nfu04916
Melanogenesis
nfu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107378492
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107378492
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
107378492
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107378492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107378492
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
107378492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
MlaC
Motif
Other DBs
NCBI-GeneID:
107378492
NCBI-ProteinID:
XP_015804220
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Position
sgr05:8876182..8879189
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AA seq
256 aa
AA seq
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MEENMRLLESFERYMEDLDREGEFFSLLDEIFQEYQPVPFPPPPSPLEHPPSPLLHSFSP
PPSPPLEHPPSPLLHSFSPPPSPPLVHPPSPLLHSFAPASSPPPPVVSSLPSPHTPTVPS
PPPSLLPGTPPAAPASAPVSDPNKRKREHQQEDRPYVKKPPNAFMIFLRDQRPKVVAELN
PKDSAAVNAVVGQRWRELSPEQRNIYIDQAHKEQRLHEQQHPGWVPNYIRKAKGVKKEPA
ASSAASSSPGGSSRSQ
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaacatgcgcctcctggagagttttgagaggtacatggaggacttggacaga
gagggggagtttttctcccttctggacgagatctttcaggagtaccagcccgttcctttt
cctcctccaccttctcctctcgaacatcctccctcacctctccttcattctttttctcct
ccaccgtctcctcctctcgaacatcctccctcacctctccttcattctttttctcctcca
ccgtctcctcctcttgtacatcctccctcacctctccttcattcttttgctcctgcttca
tctccccctcctcctgttgtttcttctctgccttcacctcatactcccactgtcccttct
ccgccaccatcccttcttcctgggactccacctgctgctcctgcttctgctccggtctcc
gacccaaataagagaaagcgtgagcaccagcaggaggaccgtccctatgtgaagaagcca
ccaaatgccttcatgatcttcctgcgggaccagaggcccaaggtggtggctgagctgaat
ccgaaagacagcgctgctgtcaacgccgtcgtaggccagaggtggagggaactgtctcct
gagcagaggaacatctacattgaccaggctcacaaggaacagaggctccacgagcagcag
cacccaggctgggtccccaactacatccgtaaggcaaaaggcgttaagaaggagccggcc
gccagctctgcagcgtccagcagcccaggagggagcagccgcagccagtga
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