Nothobranchius furzeri (turquoise killifish): 107378542
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Entry
107378542 CDS
T05163
Symbol
csgr05h17orf53
Name
(RefSeq) uncharacterized protein C17orf53 homolog
KO
K27803
homologous recombination OB-fold protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107378542 (csgr05h17orf53)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107378542 (csgr05h17orf53)
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Gene cluster
GFIT
Motif
Pfam:
HROB
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
107378542
NCBI-ProteinID:
XP_015804292
UniProt:
A0A9D2YU10
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Position
sgr05:11286915..11303723
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AA seq
627 aa
AA seq
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MTAMTCKLSGLFSIGDDFDDEDLLSTDWTACSASGPASVAAAVPSCTLRASSVADREPEK
IHHQQTGEKLAAVCNGTASGSSVHSAARQTVALGLRQLSSSSARPHSPPPLTPTTSQPNL
AQQQSHVNTQALIKPRIAQDDFDDWDVDLADLDESDNHMGTLQKPAAFTPPATAAEPQSA
AKTLRPSAHGGSQTLHNQTFRELRTACNSSSSSSFNAPPRSPCSPHLQSSNPRAFYPTTS
PHTPAVFLGLTARSPTPSSFSSIVNHPHQSQKQWTTPRASAQARNLFETVSPAPSPSVSS
TTRSTHPLHTPVLTNRLVQLVSASNKLPKKRPRSEAHQPRTRRFPGPAGLLPQQPQGQNL
DEIVVSVPQTPAHGVVARSPSQCSSSQAEDDEFSSSGAWAAMKAEMGLDERNPSCFLHTY
SVVMVLRKAALKQLPRNKVPNMAVCLKSILHTNTDAKVVFKDPTGEIQGTVHRRLLEERV
EELKVGAVLLLKQVGVFSPSHRNHYLNVTSNNLLRIYAPDGVSLYSSQLPPLVLEPMLSS
PASVPGVLRGTVSRMQLEFDEEDEEGKEGGGHMEKAKIPRAQTHTEENKSVTSSRGPRGS
TEQEAGWDADDDLDELLGELPEDTYSF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgatgacctgcaaactgagtggcctgttcagcatcggagatgactttgatgat
gaggacctgcttagtacagactggaccgcctgctcagcctccggaccagccagtgtggca
gctgctgtgccatcctgcactctgcgggcttcctctgtggctgacagagagccggaaaaa
atccatcatcagcaaactggagagaaattggctgctgtgtgtaatggcacagcatcaggg
agcagcgtgcacagtgctgccaggcaaactgttgctttgggtttgagacagctctcctcc
tcctccgctcgtcctcactcccctcctccactcacaccgactacctctcagcctaatttg
gctcaacagcagagccacgtcaacactcaggcgctgataaagcctcgcatcgctcaggat
gattttgatgattgggatgttgacctggcggacttggacgagtctgacaaccatatgggg
acactacagaaacctgctgctttcactccacctgcaactgcagcggaacctcagtctgca
gccaaaacactgcgtccctcggcccatggaggaagtcaaacccttcataatcaaaccttt
agagagctcagaactgcatgcaactcttccagctcatcaagttttaatgcacctcctcgg
agcccctgttcgccacatctgcagtcttcaaatcctcgtgccttttatcctacaacttct
ccacatactcctgcggtttttcttgggcttactgcacgctccccgactcccagcagtttt
tctagcattgtaaatcatcctcatcagtcacagaaacagtggactactccacgagcctct
gctcaggctcgaaatctgtttgaaacggtctccccagcaccctccccctcggtgagttcc
accacccgaagtactcatcctctacacacaccagtcctgactaatcgcctggttcagctg
gtatctgcctccaataaactccccaagaagagaccccgatctgaggctcaccagcccagg
accaggcgcttcccgggtcctgcaggactcctcccccagcagcctcagggtcagaacctg
gatgagatagtggtttctgttcctcagactcctgctcacggggtcgtggctcgatcacca
agtcagtgttcgagctcacaggcggaggacgatgagttcagcagcagtggtgcctgggct
gcgatgaaggcagagatgggtctggatgagaggaatccgtcatgcttcctgcacacctac
agcgttgtcatggtgctgcgcaaggctgcactgaaacagctgcctagaaacaaagtgccc
aacatggctgtgtgtctgaagagcattctccacacgaatactgacgctaaggtggtgttt
aaggacccaacaggggagatccagggaacggtgcatcggcgtctcctggaggaacgggtg
gaggagctgaaagttggagctgtgctgctgctcaaacaggtgggggtgttttccccctcc
catcgtaaccactacctgaatgtgacatccaacaacctgctaaggatctacgcccccgac
ggagtcagcctgtactccagtcagctgcctccactcgtcctggagccgatgttgtcatca
cccgcttcggttcccggcgtcctccgggggacggtgtctcggatgcagctggagtttgat
gaagaggacgaggagggaaaagagggaggaggacacatggagaaagccaaaatccctcgg
gcccagacacacaccgaggagaacaaatcggttacctccagcagaggcccccgtgggagc
accgagcaggaggcaggctgggatgcagatgatgacctggacgagctgctgggagagttg
cctgaggacacctacagcttttga
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