Nothobranchius furzeri (turquoise killifish): 107378565
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Entry
107378565 CDS
T05163
Symbol
cacnb1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107378565 (cacnb1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107378565 (cacnb1)
04261 Adrenergic signaling in cardiomyocytes
107378565 (cacnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107378565 (cacnb1)
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107378565 (cacnb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
107378565
NCBI-ProteinID:
XP_015804343
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Position
sgr05:complement(13341571..13401148)
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AA seq
668 aa
AA seq
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MVQKSNSMSRTPSTPNQEIPMGMIDHHPQGKYAKRKSRFKRSDGSTSSDTTSNSFVRQGS
ADSYTSRPSDSDVSLEEDPEALRKEADRQALATLEKAKTKPVAFAVRTNVGYNPGPSDDV
PVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENTRQMQEQRMRQN
RLSSSKSGGSSSLDVATGTRRPTPPGTAHVDMSTGSFDADPLDLDAEEPPESQGDPRSPK
SMSGSVISPQANAHRLPFFKKMEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDF
LKHKFEGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLDVLAEVQSEIERIFEL
ARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRLIKSRGKSQAKHLNVQMV
AADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPPSSNPPNPLLNRTMATAA
LAASPEPVSNLQGSYLVHGEQKREGVPAESGGSSTLHDYHTELGGKPHQQQMYLRSSRGQ
LRGGSGRGLSRQDTFDSETQGSRDSAYTEAGDSCMDIETDPYEEPEPYRGSGGSRLHLAQ
HHGRQASWEDEGAEPDQENLNHPSTPSQMQPHGRAKLRERYCQDPVDTGSHVSRNKNQDD
WAKDVYIH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaaaagtaatagtatgtccaggacgccttcgacccccaaccaggagatcccc
atgggcatgatcgaccaccatccacagggaaagtacgccaagaggaagagccgatttaag
cgctccgatggaagcacctcctccgataccacctccaacagcttcgtccgacagggctct
gcagactcgtacacgagccggccgtcggactcagacgtgtccctggaggaggatcctgag
gctctgaggaaggaggccgacagacaggctctcgccaccctcgagaaggcaaagaccaaa
ccagtggcatttgctgtgcgcacaaacgtgggttacaacccggggcccagtgatgatgtt
cctgtgcagggcatggccatctcctttgaagccaaagactttctgcacattaaagagaag
tacaacaacgactggtggatcgggcgtctggtgaaggagggatgtgaggtgggcttcatc
cccagcccggtcaaattggagaacacccgtcagatgcaggagcagagaatgagacagaac
cggcttagctccagtaaatctggaggaagttctagtctggacgttgccacgggaacccgc
aggcctactccacctggaacagctcacgtggacatgtccacagggtcttttgacgctgac
ccacttgacctggatgctgaggagccccctgagtcccagggtgaccctcgctcccccaag
agcatgtcaggcagcgtaatatccccccaggccaacgcccaccgactgcccttctttaag
aagatggagcatgtccccccctatgacgtggtcccctccatgagacccatcattcttgtt
ggaccctcactgaaaggctatgaggttacagacatgatgcagaaagcactatttgatttt
ctgaaacacaagtttgagggcaggatatccatcacacgtgtgacggcggacatctctctg
gccaaacgttcagtcctcaataaccccagcaaacacaccatcattgagcgctccagtacc
cgctcaagcctggacgtactggccgaggtgcagagtgagatcgagcgtatctttgagctg
gcccgcaccctccagctcgttgctttggatgcagacaccatcaaccacccatctcagctg
gctaagacctcccttgctcccattattgtctatatcaaaatagcctcacccaaggttctc
caaaggctcataaagtccagagggaaatcccaggccaaacatttaaacgtgcagatggtt
gcagcagacaagctggctcagtgcccacctgaactgtttgacatcatcctggatgagaac
cagctggaagatgcatgtgaacatctggctgattacctggaagcctactggaaggcaaca
cacccacccagcagcaaccctcccaaccccctgctgaaccgcaccatggccacggcggcc
ctggccgcctcccctgagcctgtctccaacctgcagggttcatacctggtgcacggtgag
cagaagcgcgaaggggttccggcagagagcggtgggagcagcactctccacgactaccac
acagagctgggaggaaagccacaccagcagcaaatgtacctgcgctcgtctcgtggtcag
ctgagaggggggagtgggagaggcctgtcgcggcaagacaccttcgactctgagacccag
ggcagccgggactcggcctacaccgaggccggcgactcctgcatggacattgagactgac
ccttacgaagagcctgaaccgtaccgggggagtgggggcagccgcctccacctggcgcag
catcacgggcgacaagcctcctgggaggacgaaggtgccgagccagaccaggagaacctg
aaccacccctccacgcctagccaaatgcagccgcacggtcgggccaagctgagggagcgt
tactgccaggaccccgtggacacgggttcccacgtgtcccgcaacaagaaccaagatgac
tgggccaaggacgtgtacatccactga
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