Nothobranchius furzeri (turquoise killifish): 107378676
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Entry
107378676 CDS
T05163
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like
KO
K08525
retinoid X receptor beta
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03320
PPAR signaling pathway
nfu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107378676
03320 PPAR signaling pathway
107378676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107378676
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nfu03310
]
107378676
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107378676
Nuclear receptors [BR:
nfu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107378676
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
107378676
NCBI-ProteinID:
XP_015804504
UniProt:
A0A1A8AAQ0
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Position
sgr05:complement(19522827..19539687)
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AA seq
426 aa
AA seq
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MSAQPPNSSASNSPSSILSCPFSVISPSLNSPVVSPSLGFGPINSSQISSSAPISGMHSV
SSSEDIKPPFGLRPMQSQSPGVMTSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRNREREGELEFSGAV
NDEMPVEKILEAETAVDMRTELHSDGGSAGNSPHDAVSNICQTADKQLFALVEWAKRIPH
FSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGALLASELQRDSAHMAGVGAIFDRES
VQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAKGLSSTTEVELLREKV
YASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQLS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacagcctcctaatagttcagcctcaaacagccccagcagcatcttaagttgt
ccattttcagtgatcagcccctctctcaactccccagtggtctccccctcactgggattt
ggacccatcaacagcagtcagatatcctcttcagcacccatatcagggatgcattcagtc
agcagctcagaagatatcaagcctccatttggcctcaggcccatgcagtcccagagcccg
ggagtaatgacgtcccagaaacgactgtgtgtgatctgtggtgaccgctcctctggcaaa
cactatggggtgtacagctgcgagggttgcaaaggtttcttcaaacgaactgtacgcaaa
gacctgagctacacctgcagggataataaagagtgcctggtcgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggctatgggcatgaagagagaagcggtc
caggaggagcgccaaaggaaccgagagcgtgaaggggagctggagttcagtggagccgta
aacgacgagatgcccgtggagaagatcctggaggcggagacggctgtggacatgaggact
gaactccactccgatggaggttcagcaggaaactctccccatgatgctgtgtccaacatc
tgtcagactgcagacaaacagctgtttgctctggtcgagtgggcaaagagaatccctcat
ttttctgaactgcctctagatgatcaagtcatccttctgcgtgcagggtggaacgagctc
ctgattgcttcgttctcccaccgctcgattcctctgaaggacggagccctcttggcgtcc
gagctgcagcgtgacagtgcacacatggcaggagttggagccatttttgatagggagagt
gtgcagagtgcagaagtcggggccatatttgacagggttctcactgagcttgttaacaaa
atgagagatatgcaaatggacaaaacagagctgggttgtctccgtgctatcgtcctgttt
aacccagatgctaaagggctctccagcacaaccgaggtggagctcctcagagaaaaggtc
tatgcatcactggagtcttactgcaagcagaagtatccagagcagcagggcaggtttgct
aagcttctccttcggttgccggcgctgcgatccataggcttgaagtgcttggagcatctc
tttttcttcaaactgatcggtgacacgccaattgacacgttcctcatggaaatgctggaa
gctccccatcaactgtcttag
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