Nothobranchius furzeri (turquoise killifish): 107378716
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Entry
107378716 CDS
T05163
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107378716 (col14a1)
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Others
107378716 (col14a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
NDNF
Fn3_Dep-1_3rd
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
107378716
NCBI-ProteinID:
XP_015804554
LinkDB
All DBs
Position
sgr05:30668778..30889170
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AA seq
1773 aa
AA seq
DB search
MLSTGGVRWCWWALLVMLALVSCFPSKAQSQVAAPRRLRFKVQSPSKLLVAWREPKGDVD
SYLFFYNSIPGGQQKEIIVSKSDTKVLITDYKPSKDYVFSVIAVRGGEQSRPLQSRFKAH
TKERGHTDGQDKTEAQRLTDPVGPTEDANEISGADQFVCHTEAVADIVILVDGSWSIGRI
NFKLVRIFLENLVNAFDIGIDKTRIGLAQYSGDPRIEWHLNTYSTKDAVIDAVKNLPYKG
GNTLTGLALTFILDNCFKPESGSRVGVPKIGILITDGKSQDDVMPPAESLRKAGVELFAI
GVKNADENELRSIASEPEDTHVYNVADFNIMSSIVEGLTKIVCEQVEQQDKDIKQKFVPE
ETGMPLRLVTSEVTAQSFRVSWSPAPGNVDEYRVVYHPVQGGEPLEAVVSGDETSLVLQN
LSSRTEYQLAVFAVYANEASEALRGSETTLAHPAVAILQLFDVTQSSMTARWKKVGGASG
YLVLYAPLVEDGDLDRKEVSVADAVMELELEGLMPDTEYAVTVYAMYGEETSDPVTIRET
TLPLSSPKNLQFSGITHNSAHISWDPASGEVKGYRIKWVMTDGQVTKEVEVGPVTSYDLK
ELASLMEYFVAIFAVHSEGQSAPLTDGFTTTPVPGPLNLHSSNVKADSFKVSWDHSAKDI
VLYRLSWAPFAGGDTKEVILSGSENQYVLTDLSPSTEYEVLLTAVFTDESESDAVSVIAT
TLARKAVRNLSLTDETTQSLDASWELEDPNVDSYRISYVSLSGNHNKEAVSVGGDQKRAV
LQPLKPDTQYRVTVTPVYRDGQDGTNVSAVGSTFPLLTAENLRVSEESYNRFRVSWDPPQ
APTVGYRIVYQPVYARGSVLETTVGEDVNSILLLNLLSGTEYNVQVTASYPAGQSEPMLI
NAKTLFLGVSGLSAYQVRPNSMCVQWQPLLQATSYRVSIQSTLNDQRQEVNLGGAASRQC
FYDLTPSSQYQISIYTQTREMEGPSVSITEMTLPAPTQAPTEPPTTESPPTLPPAKEVCK
EAKADLVFLVDGSWSIGDDNFMKITHFLYSTMGSLDQIGPDGTQVAVAQFSDDARTEFQL
SSHGNKEALLEAIQKIQYKGGNTKTGRAIKHVKESIYTPAAGARRGVPKVLVVLTDGRSQ
DDVNKVSREMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQLIT
FVCEAATATCPSVLMGGNTMAGFRMMEKFGLVEKEYSSIPGVSLEPGSFNSFSCYRLHRD
ALVLQPTIYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKNNEPLVGLILDNSGKT
LTFFNYDYRGDFQTVTFEGPDIKKIFHGSFHKLHVTVSKTSVKVVLDCSAVGEKPVGAAG
NITTDGVEILGRMVRSRGKRDNSAPFQLQMFDIICSTSWASRDKCCELPALRVEEQCPPM
PHSCTCSQESEGPPGPSGPPGGPGVRGARGDRGEPGVTGPQGPTGEAGPPGPPGPPGPQG
PSGLSIQGPPGVRGEKGERGEIGPAGPLGVPGSPGSPGREGPPGLRGQTGNSGPQGRQGP
TGPVGAPGAPGAPGPGGPAGSTGDQGLPGPVGTKGDKGERGDVMSQSAVRTIARQVCEQL
IQGYMSRYNSILNQIPLQSSSSVRTVPGPPGEPGRTGPPGPQGEQGPPGRLGFPGTNGQS
GQPGERGLPGEKGDRGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPPGRPGSPGAAGRPGN
PGTTGPAGPPGYCDQNSCLGYNVGAQQDYGNDY
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgacaggaggggtcaggtggtgctggtgggctctactggtgatgctggctctt
gtttcctgtttccccagtaaagctcagagtcaggttgcagctcctcggaggcttcgcttc
aaggtgcagagtcccagcaaactcctcgttgcgtggagggaacccaaaggagacgtcgac
agctatttatttttctacaacagcataccaggtggtcaacagaaggagatcattgtgtct
aaatctgacactaaggtgttgataacggactacaaaccctctaaggactatgttttcagt
gtcatcgctgtcagaggtggagagcagagcagaccacttcagagcagatttaaagctcat
acaaaagaacgaggacatactgatggacaggacaaaacggaggcccagcgactgacggat
cctgtgggacctactgaggatgccaacgagatctctggagccgatcagtttgtgtgccac
accgaggccgttgcagatattgtgatcctggttgatggttcttggagtattgggaggatc
aacttcaagctggtccggatatttctggaaaatctggtcaatgcctttgatataggcatt
gacaagacaaggataggtctggcgcagtacagcggcgatcccaggatcgagtggcatcta
aatacttactccactaaagatgcagtcattgatgcagtcaagaacctgccctacaaagga
ggaaacactctcacaggcctagcattgacttttatcctggacaactgtttcaagcctgaa
tctggctctcgtgtcggggtgccgaagattgggatcctcatcacagatggaaaatcccag
gatgatgtgatgccaccagcagaaagcctgagaaaggctggtgttgagctgttcgctatc
ggtgtaaagaacgctgacgagaatgagctgcgctccatcgcctccgagccagaggacact
cacgtctacaatgtggctgacttcaacattatgagctctatagtcgaggggttgacaaaa
atagtgtgtgagcaagtggagcagcaagacaaagacatcaagcagaaatttgtaccggag
gaaacaggaatgccactccgcctggtgacatcagaagtcactgcgcaaagctttcgggtc
tcatggagccctgctcctgggaacgtagacgaatacagagtggtttatcatcctgttcag
ggaggagagccgctagaggctgtggtgtctggcgatgagacgtcattggtgttacagaac
ctcagctctcgaacggagtatcagctcgccgtgtttgccgtgtatgcaaatgaggcaagt
gaagctctgagaggatcagaaaccaccttggctcatccagcagtggccatccttcagctg
tttgatgtgactcaaagctccatgacagcgagatggaagaaagtaggtggagcctcaggc
tacctggtgttgtacgcccctctcgtagaagatggtgacttggacaggaaggaggtgagt
gtagctgatgcagtcatggagctggagctggaaggtttgatgcctgacactgaatacgcc
gtgacggtttatgccatgtatggagaggagaccagcgacccagttacaatccgagaaacg
acgttaccattgagttcccccaagaatctccagttttctggcatcactcacaactcagcc
cacatcagctgggacccagcatctggtgaagtcaaaggctaccgcatcaagtgggtcatg
actgatggacaagtcactaaggaggtggaggtgggcccagtgacctcttacgaccttaag
gagctggcatccctgatggagtactttgtagccatctttgccgtgcacagcgagggacag
tcagcaccgctcaccgatggcttcactaccactccagtccccggtcctctaaacctacac
tccagtaatgtcaaggcagacagctttaaggtcagctgggatcactcagccaaggacatc
gttctctacagactctcctgggcaccattcgctggtggtgacacaaaggaggtgatcctg
agtggaagtgaaaaccaatacgttctcacagatctaagtccctctacggaatacgaagtc
ttgctgacggccgttttcacagacgaatcggagagcgacgccgtctctgtcatagcaacc
acactggcgcgtaaggctgtgagaaacctttccctgacggatgagaccacccagagcttg
gatgcatcttgggagctggaagaccccaatgtggacagctacaggatttcctatgtcagc
ctcagtgggaaccacaacaaggaggctgtgtcagttggtggtgatcagaaacgtgcggtt
ctccagcctttaaaaccggacacccagtatagagtgacagtcacaccagtgtacagagat
ggacaagatggcacaaatgtttctgctgtgggttcaacattcccactcctgacagccgaa
aacctccgtgtgtcagaggagtcgtacaaccgcttcagggtctcttgggatccacctcag
gctcctactgtgggctacaggattgtctaccagcctgtctatgctcgaggttcagttttg
gagacgacagtgggcgaagatgtgaactccattcttcttctaaacctgctgagtgggacc
gagtacaacgtccaagtgacagcgtcctatcctgcaggacagagtgaaccgatgctgatt
aatgcaaagacattgtttctgggtgtctctggcttgtccgcctaccaggtgcgtcccaac
agcatgtgtgttcagtggcaaccccttctacaggctacgtcatacagggtctctatacag
tcaacactcaatgatcagaggcaggaagtgaacctggggggcgcagcttcccgtcagtgt
ttctatgatctgactcccagcagccaataccagatcagtatttacacacagacacgtgaa
atggaaggaccgtctgtatccatcacagagatgacactgccggcccctactcaggccccg
actgaaccccccaccacagagtccccacctaccctcccacctgccaaagaagtgtgcaag
gaggccaaggcagacctggtgttcctggtggatggctcctggtccatcggagacgacaac
tttatgaagatcacacattttctctacagcaccatgggatcattggatcagatcggacca
gacggcacccaggtggccgtcgctcagttcagtgatgatgcacggacggagttccagctg
agttcccatggcaacaaggaagccctgctagaagcgatacagaagatccagtacaaggga
ggaaacaccaaaacaggtcgagccatcaaacatgtgaaggaatccatttatacaccagca
gcaggagccaggaggggcgttcctaaagtcctggttgttctgactgatggacgttcacaa
gatgatgtaaacaaagtgtccagagagatgcaaatggaaggctacatcatctttgccatc
ggctttgcggatgcagactacggagagctggtgaacattgccagtaaacccagtgatcgg
cacgtcttttttgtggatgatctggacgctgtgaagaaaatagaagagcagctcatcacc
ttcgtctgtgaggctgcaactgccacatgtccatcggttttgatgggtggtaacacgatg
gcaggtttcaggatgatggagaagtttggcctggtggagaaggagtacagctccatacct
ggagtttctctggagcccggctccttcaacagcttctcctgctacaggttgcaccgcgac
gctctggtgttacagcccaccatttaccttcatcctgagggtttaccgtctgactacacc
atttctatgatgcttcgtttactccctgagacgccgcaggaaccctttgcattgtgggaa
attctcaacaaaaacaatgagccattggtgggactaatccttgacaattcagggaagaca
ttgacgttcttcaactatgactacagaggagacttccaaacggttaccttcgaaggacca
gatatcaaaaaaatcttccatggcagcttccacaagctccatgtaactgtcagcaagacg
tcagtgaaagtagtgttggattgttcagcagtgggagagaaaccagtcggcgcagctggg
aacatcaccacagacggggtggagatcctgggaagaatggttcggtcccgaggcaaaaga
gacaactctgcaccatttcagctgcagatgtttgacatcatctgcagcacgtcctgggcc
agcagagataagtgctgcgagctgccagcattgagagttgaagagcagtgccctcccatg
cctcattcctgcacctgctcccaggagagtgaaggacctccaggaccctccggacctcct
ggtggtccgggtgtaagaggtgccagaggagacagaggggagccaggagtgacgggacct
cagggccctacaggagaagctggcccacctggacctccaggacctcctggtcctcaggga
cccagtggactctccattcagggacccccaggtgtccgcggtgagaagggggagagaggg
gagatcggaccagcaggaccactaggggttcctgggagtcccggctcacctggtagagaa
ggcccaccaggactcaggggtcagacggggaacagcggaccacagggacgacaaggaccc
acaggacctgtcggagcgccgggagctccaggagctccaggaccaggtgggccagcaggg
tccacaggagatcaaggacttcctggcccagttggtacaaaaggagataaaggagaaaga
ggcgatgtgatgtcccaatctgcagtgaggacaattgctcggcaggtgtgtgagcagctg
atccagggttacatgtctcgttataactccatcttgaaccagattcctctccagtcatcg
tcgtcagtcagaacggtacctggaccgccaggagagccgggcaggactggtcctcctggt
cctcagggagagcaaggcccacctggcagacttgggttcccgggtacaaatggccagagc
ggtcagccaggtgaaagaggtctaccaggagagaagggggacagggggagtccaggtgtc
gggagtcagggtcctcgaggaccacccggtcctcccggcttgccaggtgaaggacggaca
ggcagccaaggcccaccaggtcggcccggtagccccggtgcagcaggtaggcccggtaat
ccaggaaccacaggaccagccggtccgccaggatactgtgatcagaactcgtgtctggga
tacaacgttggagctcagcaggattatgggaatgattactga
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integrated database retrieval system
