Nothobranchius furzeri (turquoise killifish): 107378721
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Entry
107378721 CDS
T05163
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107378721 (sntb1)
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
107378721
NCBI-ProteinID:
XP_015804560
UniProt:
A0A1A8UDX7
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Position
sgr05:30480899..30534305
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AA seq
544 aa
AA seq
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MAVVAAAGVSRGSGAHRSGLVEVLVREHWHKVLVNLSEEALTLSCEDGENVNSNGLTNGS
YLDNSNTNSNNGPQAVRTAFTDLPERVPEAIANRKRCVKVTKQEVGGLGISIKGGKENKM
PILISKIFKGLAADQTQALYVGDAILSVNGMNLRDATHDEAVQVLKRAGKEVTLEVKYMR
EATPYVRKGSPVSEISWETPPPESPRPSSPTITSPFSSDSPSSPTLPSLSLNSDRRYIPL
KMCYATRAMTKPDPENRQLELHSPDTRHTIVLRCPDQPSALSWFSSMHSVTSMLAQQAQA
EVVQNTSRTGIAGSKEIRHLGWLAGKTESEKQSWKPVLVVVTEKDLLLYDSLPRGKEAWQ
SPAHTFPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIESHLFRAETTKDLSLWTRH
IVNGCHSSAEMIKEVTTSCLYHSQECRLVIHYEKGFSVLAEQKTTDEEGGEERVVSTSIQ
PQVLLSYPFEKLKMSSDDGVRLLLLDFGGNEGEVQLDLHSCPKPIVFILHSFLSAKVARL
GLVA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagcagccgcaggcgtctcgagaggctccggggcgcacagaagtggatta
gtggaggttttggtgcgggagcactggcacaaagttttggtaaacttgagcgaggaggcg
ctgacgctgagctgcgaggatggcgagaatgtcaactcaaacgggctcaccaacggatcg
tacctggataacagcaacaccaactccaacaatggcccccaagctgtgcgcaccgctttc
acggacctcccggagcgagtgcccgaggcgatcgccaacagaaagcgctgcgtcaaggtg
accaagcaggaagtcggagggctcggcatcagcattaaaggagggaaggagaacaagatg
cccattctcatcagtaagatattcaaggggctcgcagcggaccagacccaggctctgtac
gtgggggacgcgatcctgtcagtgaacgggatgaacctgcgggacgccacgcacgatgag
gcggtgcaggtgctgaaacgtgcggggaaggaggtgacactggaagtgaaatacatgcgt
gaggctacaccttacgtcagaaagggctctcccgtgtcagagatcagctgggagactcct
cctcctgagtctccccgtcccagcagccctaccatcacctcccccttctcatccgactct
cccagctctcctacccttccctccctgtcactgaacagtgacaggaggtacataccgttg
aagatgtgttatgcaacacgagccatgaccaaacctgatccggagaacagacaactggag
ctgcacagtcccgataccagacacaccatagtgctccgctgcccggaccaaccatctgcc
ctgtcctggttctcttccatgcactcggtcacatccatgctggcacagcaagcacaggcg
gaggtcgtccagaatacatccaggacggggattgctggcagcaaagagattcgacacctg
ggatggctggcagggaagacggagagtgagaaacagagctggaagccggtgctggtggtg
gtgacggagaaagacctgttgctgtacgacagcttaccgagaggaaaagaggcctggcag
agcccggcacacacctttccacttttagccacacgccttgtccactccgggcctgaccgg
ggttcacctcactccggcacggagctgttcttcgccactcggaccggcacacgacttggc
attgaaagtcaccttttccgagctgagaccaccaaggatctgtccctttggaccaggcac
atagtcaacggatgccactcatcagctgagatgatcaaagaagtcacaacaagttgtttg
taccacagtcaggagtgccggctggtgattcactacgaaaagggcttctctgtgctggct
gagcagaaaacaacagatgaggagggaggtgaagagagagtagtcagcacttccatccag
ccccaagtgctcctctcctacccctttgaaaaactaaagatgtcctcggacgacggcgtt
cgcttgcttcttctcgactttggagggaacgagggggaagttcaactggacctccactcg
tgtccaaagccgatcgtcttcatcctccactccttcttgtctgctaaagtcgcccgtctg
ggtctggtggcctga
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