Nothobranchius furzeri (turquoise killifish): 107378724
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Entry
107378724 CDS
T05163
Symbol
lrrc16a
Name
(RefSeq) leucine-rich repeat-containing protein 16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107378724 (lrrc16a)
Membrane trafficking [BR:
nfu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107378724 (lrrc16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
107378724
NCBI-ProteinID:
XP_015804568
UniProt:
A0A8C6L8A9
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All DBs
Position
sgr05:30325913..30401745
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AA seq
1400 aa
AA seq
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MSEEASQVPKELLESVRDAVGRKVKLSLRKRVKLEIKGDKMENRVLALAAHRAYLLTARI
PAKVEHNFNYLEIQGIVCNKPTQLFVEYERGSFSVKLPSTEEVNEVVAHIGNCLLRICPG
LPPSKVMKKLSVEPLDRLTALQTLWENNKPAEPGPCGGFSQMYRCVCDWLGLPYREEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTRLSTKDYKLSADVCEQILR
VVSRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLSNNPLEDRGVSSLGAQF
AKLRMGLKHLNFSKTSLSPKGVNSLCQSLSANPSIPSSLVHLDLSGNMLRGDDMQHFYNF
LGQPNSLSTLDLSSTDCSLDQVCSALLRGSARHLSVLNVSKSVFSHRKGKEVPPSFKHFF
SSAESLSSINVSGTKLPAEALKALLLGLASNPSLKEVSLDLSCCELGHCLRSGGSQILES
CIAEIPNISSLDLSDNGLDSELSTLLVWLAKNRSIRHLSLGKNFTNIKSKNLAPVLDGLV
HMIQEEESPLTSLSLADSRLKSDLSIVLNALGSNSSLTRLDISGNSMGDMGAKMLAKALQ
INSKLRTIIWDKNNTSPQGLQDVAAALEKNFTIRFMPIPIIDASQALKASPEKTEDALLK
IENYLYRNHETRKYLQEQAYRLQQGIVTTTTQQVIDRICVKVQDHLNSLKNSETDAVLED
VRSAENLIKDARNSKTLLPNLYHLGAASREELNSSSVGPIQEKLESMAGEVTTVMDQQLQ
TLLESMVDTAESLCPHVMKRSNLRPELMKASSARMVVPKSFVTNTLLEQSGVDIINKISE
VKLSLASFLSDRIVDEILEALSSSQHILADHLVRRGRPLLQRESVDLDAPEEKIPKRAST
ELLEAERLEDLETCLTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIHV
EDTLVSSQTPPTQSVFSPKQDQRPSGGIAELPSEEEKKLQHFTKLRPRRNKKTHSSKVAQ
LNSAQCHDGEQNGLMGRVDEGVDEFFSKKVTKMDSKRFLKGSDSQDGEKKKSKGGFLNLI
KRSSKADKLDKSEKNQAASASCATSSVASPSGFTIPEEPCSPKGAVKSPAPEPKSRDAST
RSQHTDYSSSSDRSEELRTPDSIDEPWDGSDGRGSPQGGKRYPGMQMMGSGLLAEMKAKQ
ERRAYKSSSPDRPDSNAAKSHSTTTGSRSPTGSINKADTAPPEKTTTRGETKPETATRLR
ATSSSNSPAGPATPKPPVPQGAKPSLAARPSIPQKPRTSRSIDEGSDASSGGRVSPKVLP
STLKKAVSEKDKDASPLSGVSTNKTTQEVRSTSDAVRRSSTNSEDQNSLKTKDKCPNSDR
TTRKKSSDSGEEADKDFILI
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagcgtcccaggttcccaaagagctactggagagtgtgagggatgcggtg
gggaggaaggtgaagttgtcactgaggaaaagagtcaaactggagatcaaaggagacaag
atggagaacagagtcctggctctggcggctcaccgtgcctacctcctaacagcacgcatt
cccgccaaggtggaacacaactttaattatctggagatccagggaattgtgtgcaacaag
ccaacacagctgtttgtagagtacgagcgcggctctttttctgtgaagctgccctccacc
gaggaggtgaacgaggtggtcgctcacatagggaactgtctcctgaggatatgtcctggt
ctaccccccagtaaagtgatgaagaagctctccgtggagcctctggacaggctgaccgct
ctgcagactctgtgggagaacaacaagcctgcagaacctggaccctgtggtgggttttct
cagatgtacaggtgtgtgtgtgactggttgggcctgccttacagagaggaagtgcagtgg
gatgttgacaccatctacttgacacaagacaccagagagctcaacctgcaggacttcagt
catctagagaacagggatctggtcgctattatagccgtgctggagttcaaccagtggttc
accaggctctccaccaaggattacaaactgtctgcagatgtgtgtgagcagatactccgg
gtggtgtctcgatccagtcggctggaagagttggttctagacaacgcgggactcaaaacg
gactttgcccagaagctggctgccgctctggcccacaaccccagctctggactcaccacc
ataaacctctctaacaaccctctggaggacagaggtgtttcctctctgggcgcccagttt
gccaaacttcgaatgggactgaagcatttaaacttttccaaaacctctctgtcacccaaa
ggggtgaatagcctttgccagtcactgagtgccaacccatccatccccagcagcctggtc
catctggacctctcagggaacatgctccgaggagacgacatgcagcatttctacaacttc
ctgggtcaacccaacagtctgtcaactcttgacctctccagcacagactgctccttggat
caggtttgctcagctcttctgcgaggctcggcccgacacctctctgtcctcaacgtgtca
aagagcgttttctctcacaggaaaggcaaagaggtgcctccgtcttttaagcatttcttc
agcagcgccgagtctctcagctccatcaacgtgtctggaaccaagctgcctgcagaggcc
ctcaaggcactcctcctcggcctggctagtaaccccagcctgaaggaagtttctctcgac
ctcagctgctgtgagcttggccattgtctgaggtctggaggttctcagatcctggagagt
tgtatagctgagatcccgaacatctccagtctggatctgtctgataacggcctggactct
gagctgtccacgctgctcgtttggctggccaagaaccgctccatcagacacttgtctctg
ggcaagaacttcaccaacatcaagtcaaaaaacctcgctcccgtgttggacggcctggtt
cacatgattcaagaggaggagtcgcccctcacctccctgtctttggcggactccagactc
aaaagcgatctctccattgttctgaacgccctcggcagcaactcctcactcaccaggctt
gacatcagcgggaactccatgggcgacatgggggctaagatgctagcaaaggcactgcaa
atcaactccaaactcaggactataatctgggataagaacaacaccagccctcagggtctt
caggatgtagctgctgctctggaaaagaacttcaccattcgctttatgcccatccccatc
atcgatgcctcccaggctctgaaggcaagcccagagaaaacggaagacgctctgctgaag
attgagaattatttgtacaggaatcatgaaactagaaaatacctccaggagcaggcttat
cggctccagcaaggcatcgtgaccaccaccacgcagcaggtgatagatcggatttgcgtg
aaggtccaggaccacctgaactctctgaagaactcagagacggatgccgtcttggaggac
gtcagatcagcggagaatctcattaaagatgccaggaactcaaaaacgcttctcccaaac
ctttaccaccttggagcagcatccagagaggagctgaacagctcatcagtgggtcccatc
caggagaaactggagtccatggctggagaggtgaccacggtcatggatcagcagctgcag
actctgttggagtcgatggtggacacagcagagtctctgtgtcctcatgtgatgaagagg
agtaaccttcgtccagagctgatgaaggcgagctcagcccggatggtggtaccgaagagc
tttgtcacgaacaccctcctggagcagtctggggtggatatcatcaacaagatcagtgag
gtgaagctgagtctggcatcctttctgtctgatcgcatcgttgatgagatcctggaggct
ctttcttcatcgcagcacatcctggcggaccatctggtgcgacgaggtcgcccgctgttg
cagcgggaatcggtggatctggatgcaccggaggagaagatacccaaacgcgcttcgacc
gagctcctggaggcagagaggcttgaggatctggaaacgtgtttgactctgtgctgcacc
agcatgactcctaaatccaaaaggaaaagcatacacagccgaatgctgcggcctgtgtct
cgtgcctttgagatggagtttgacctggacaaggcccttgaggacgtaccaatccacgta
gaggacacactcgtgtcatcccagactccacccactcaatccgtattttcccccaaacaa
gatcaacgaccatcaggagggattgcagagctgccatcagaggaggagaagaaactgcag
catttcaccaaactacgacctcggaggaacaaaaaaacacactccagtaaagtagctcaa
ctcaacagtgctcagtgtcatgatggggaacaaaatggtctgatgggaagggtggatgaa
ggagtggacgagttcttctctaaaaaagttactaaaatggattccaaacgtttcttgaaa
ggttcagattctcaggatggagagaagaaaaagagtaaaggcggatttctaaacctcatt
aagcgatcgtctaaagcagataaattagataaatctgagaaaaaccaggcagcttcagca
tcctgtgctacatcctctgtagcctcgccctcaggattcaccatccccgaggagccctgt
tctccaaagggggcagttaagagcccagctccggaaccaaagtccagagatgcttccact
cgctcacagcacacagactacagcagcagctccgaccgctctgaggaactcaggactccc
gactctatagacgaaccatgggatggttcagacggcagggggagtcctcagggaggaaaa
cggtaccctgggatgcagatgatgggaagtggcctgctggcagagatgaaggccaaacag
gagagaagagcttacaagtcttccagccctgacagacctgacagcaatgcagccaagtcc
cattctacgaccacagggagcaggtctcccacgggttccattaacaaagctgacacagct
cctccagaaaagaccacaacacgtggagaaaccaagcctgagacagccactcgcctcagg
gctacatcctcctccaattccccagcaggaccagcaacccccaaaccaccagtaccacaa
ggagcaaagccttctctggcagctcgaccctccatcccacagaaaccgaggaccagcaga
agcatagatgagggttcagacgcttccagcggtggtcgggtgtctcctaaagttctcccc
tccacactgaagaaggctgtctcagagaaagacaaggacgccagtcctctatcgggagtt
tccaccaataaaaccactcaggaagtgaggtcgacctcagacgctgttcggcgatccagc
accaactctgaggatcaaaactccctcaaaaccaaggacaaatgtccaaactcagacagg
acaacacgcaagaagtcatcagactcaggggaagaggcagacaaagactttattttgata
tga
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