Nothobranchius furzeri (turquoise killifish): 107378738
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Entry
107378738 CDS
T05163
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfu03016
]
107378738 (cdkal1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107378738 (cdkal1)
Transfer RNA biogenesis [BR:
nfu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107378738 (cdkal1)
Prokaryotic type
Methylthiotransferases
107378738 (cdkal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Motif
Other DBs
NCBI-GeneID:
107378738
NCBI-ProteinID:
XP_015804593
UniProt:
A0A1A8UAR2
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All DBs
Position
sgr05:complement(29405598..29759463)
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AA seq
556 aa
AA seq
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MPSASDSLIEDIEDMVSSGDPTPHERQSARKNIMPRSRKRKELPSNEELQAESLIPGTQK
VWMKTWGCSHNSSDGEYMAGQLAASGYKMTDDPTEADVWLLNSCTVKNPAEDHFRNSIKK
AQDQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRKLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEEIPDGAMLRLGMTNPPYILEHLQEM
AKVLNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKRVVDFLKERVPGVTIATDIICG
FPGETEEDFQETVELVKHYQFPSLFINQFYPRPGTPAAKMDQVPAHVKKQRTKELSQVFH
SYSPYGHKVGERQHVLVTEESFDTQYYVAHNKFYEQVLVPKRAEFKGKMIEVDVYEAGKH
FMKGKPVEDSTPFTPSISAPLLKGEVSGLKQKQGAAAADPTLSIGSYRPDREVLRKLWIG
VALAAAILALIVEKLY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcctctgattctctgattgaggacatcgaggacatggtgtcttctggtgac
cccactcctcatgaaagacaatctgctagaaagaatattatgccgaggtccaggaagagg
aaagagcttccgagcaacgaggagctccaagctgaaagtttgatcccaggtacccaaaag
gtgtggatgaaaacatgggggtgcagtcataacagctcagacggagagtacatggctgga
cagctcgctgccagcggctacaagatgacagacgacccaacagaagcagacgtctggtta
ctcaacagctgcacagtgaagaatcctgcagaggaccacttcagaaactccatcaaaaaa
gcccaggatcagcagaaaaaggtggttgtagcaggttgtgttccccaagctcagccacgg
atggactacctcaaagggctcagcattattggggtccaacagattgatcgggttgtggaa
gtagtggacgaggctgttaaaggtcactcagttcgattgttgggacagaagaaggatggt
ggaaggaaacttggaggcgccagactggacctcccgaagatcagaaaaaacccgctcata
gaaatcatctccattaacactgggtgtctgaatgcatgcacctactgcaagactaaacat
gctagaggagacctggccagctatcccatagaggagctcgtggagagagccagacagtcg
ttccaggagggagtgtgcgagatctggttgaccagtgaggacacgggagcttacggcaga
gacatcgggacagatttgcccacattgctgtggaagttggtggaggagattcctgatgga
gccatgctgaggcttggaatgaccaacccaccttatatcctggaacacctacaggagatg
gccaaggttctgaatcacccccgcgtctatgcgtttctccatgtccctgtgcaatctgcc
tcagacagcgtattgatggacatgaagagagaatactgtattgatgactttaaaagagtg
gtggacttcctcaaagagagagtacctggtgtaacaattgctacagacataatctgcggt
tttcctggtgaaactgaggaggatttccaggagacagtagagctggtgaaacactatcag
ttccccagtctcttcatcaaccagttctaccccagacccggcacccctgctgctaagatg
gaccaagtaccagcacacgtgaagaagcaaaggactaaagagctctcacaagtcttccac
tcctacagcccctacggccacaaggtcggggagaggcaacatgtgctggtgaccgaggag
tcgtttgatactcagtattatgtggctcacaacaaattctatgaacaggtgctggtacct
aaaagagcagaattcaaagggaagatgattgaagtggacgtttacgaggcaggaaaacac
tttatgaagggaaaaccggtggaagacagcacaccgttcactccgtccatctctgcgccg
cttctaaaaggagaagtgtcaggtctgaagcagaaacaaggagcagctgctgcagacccg
actctctccatcggctcctaccgaccggacagggaggtgctgaggaagctgtggatcggc
gtggcgctcgcagccgccatcttggcccttattgttgagaagttatactga
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