Nothobranchius furzeri (turquoise killifish): 107378838
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Entry
107378838 CDS
T05163
Symbol
rbmx
Name
(RefSeq) RNA-binding motif protein, X chromosome
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107378838 (rbmx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107378838 (rbmx)
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
hnRNP proteins
107378838 (rbmx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_PARP14_3
RRM_5
PHM7_cyt
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107378838
NCBI-ProteinID:
XP_015804748
UniProt:
A0A1A7ZLK9
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All DBs
Position
sgr01:39935291..39947293
Genome browser
AA seq
385 aa
AA seq
DB search
MVEADIPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFENPA
DAKDAAHEMNGKSLDGKPIKVEQATKPQFESAGRRGPPMYSRGRGPPRGPRGSRGGFRGP
PSRDYYDEGDSYYKGMSSRGPPPMKRGPPIRDGGPPPKRSAPSGPMSRPPMSRDRDPYGP
PPPRRDSMMSRRDDYPSPRDDHYSSKDSYSSRDYNSRDSRDYGPPSRDYSYREYSNSSSR
DDYGSMSRGYSDRDSYGGGREPRGYVERPSGGSYRDSYDGYGNSRSAPPSRGPPPSYGGS
SGSSRYDDYGSSSRDGYGSRDSYPSSRSDQYPPSRGERMGRQERGPAPPADRGYPPRDSY
GSSRGGPRGGRGGIRADRGMARSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcagacataccagggaagctcttcatcggtgggttaaacacggagaccacc
gagaaggccttggagcagtacttcagcaaatatggcaggattgttgaagttcttctgatg
aaagatcgtgaaacaaacaaatcaaggggctttgcatttgttacgtttgaaaatcccgct
gatgcgaaagatgcagctcacgagatgaatggaaagtctcttgatggcaagcctattaaa
gtggagcaagctacaaagcctcagtttgagagtgctggcaggcgtggaccacctatgtac
tcccgcggtcgtggtccacccagaggtcctcgtggttccagaggtggtttcaggggtccc
ccatccagagactactacgatgaaggggattcctactataaagggatgtcatctagaggc
ccccctccaatgaaacgaggtcccccgatccgtgatggaggtccccctcctaaaaggtct
gcaccatctggtcccatgagtagacccccaatgtccagagaccgggatccctatggtcca
cccccacctcgtagagactcgatgatgtcaaggagggatgattatccatcaccaagagat
gaccattacagctctaaagacagttactccagtcgggattataattctagagattcaagg
gactacggacctccttcaagagattactcgtacagagagtattctaattccagctcccgt
gatgactatggctcaatgtcgagaggatacagtgaccgtgatagttatgggggtggtcgg
gaaccaagaggctacgttgaacgacccagtggtggctcctacagagattcatatgatggt
tacggtaactctcgcagcgccccaccctcacggggccccccaccatcctatggtggaagc
agtggaagcagtcgttacgatgactatggaagcagctcccgggatggatatggcagtcgt
gacagttaccccagcagtcggagtgaccaatatccacctagccgcggagagcgaatgggc
aggcaggaaaggggcccagccccccctgctgatagaggctaccctcctcgtgactcgtat
ggctcaagtcgtggcgggccacgaggaggccgaggtggaatccgagctgataggggcatg
gctcgcagtagatactga
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