Nothobranchius furzeri (turquoise killifish): 107379059
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Entry
107379059 CDS
T05163
Name
(RefSeq) thrombospondin-3a isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107379059
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107379059
09144 Cellular community - eukaryotes
04510 Focal adhesion
107379059
09142 Cell motility
04820 Cytoskeleton in muscle cells
107379059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107379059
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107379059
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107379059
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Opsonins
107379059
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107379059
Exosomal proteins of colorectal cancer cells
107379059
Exosomal proteins of bladder cancer cells
107379059
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107379059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
107379059
NCBI-ProteinID:
XP_015805130
UniProt:
A0A1A8AVA9
LinkDB
All DBs
Position
sgr05:46229120..46244267
Genome browser
AA seq
951 aa
AA seq
DB search
MGWSFPVLLSVIGFQLTAGVLDGPDVQVIDMLGLQDSKQTVTAVEKLAGGLSALSDVYVV
STFRLPAKLGGVLFGLYSKQDNRKYLEVAVMGKINKVLVRYVKADGKVHTVNLQNSNLAD
GRTHSIIVRLGGLQRNNMQVELYVDCRLADSSQGLPPLVPLPREAEMVEIRHGQKSYARL
QGAVESLRLALGGSVAKAGALTDCPFQGDASSYSSVNAEVHSILGEHTKALIGQLIIFNQ
ILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCYKGVSCMDSLQYPGYTC
GPCPPGTTGNGTHCMDINECDLQPCYLPEACMNTEGGFSCKPCPPGLWGVPLSGTGLNFA
KTNRQECVDIDECLDLPDACVANSVCINTVGSYKCGGCKPGFLGNQTSGCFPRKSCAALT
FNPCDSNAHCTMERNGEVACRCNVGWAGNGHTCGVDTDIDGYPDRSLPCMDNDKHCKQDN
CVVTPNSGQEDADNDGVGDQCDEDADGDGIKNVEDNCRLTPNKDQQNSDSDSFGDSCDNC
PTVPNSDQKDTDNNGQGDACDQDIDGDGIPNVLDNCPRVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDVDNDLVGDVCDTNMDTDGDGLQDTRDNCPDIPNSSQLDSDNDGLGDDCDHD
DDNDGVLDDFDNCRLIINPNQKDSDANGVGDVCENDFDNDAVMDLIDVCPESAEVTLTDF
RAYQTVILDPEGDAQIDPNWVVLNQGMEIIQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQAYWQSIPFRATAQPALQLKAVKSRTGPGEFLR
NALWHTGDTPGEVKLLWKDPRNIGWKDKTSYRWQLSHRPQVGYIRVKLFEGMDLVADSDV
VIDTTMRGGRLGVFCFSQENIIWSNLGYRCNDTVPEDFKSHRKQVVMHIQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggttggagtttcccggttttgctgtcagtcatcggtttccagctgacggcgggagtc
ctggatggaccggatgttcaagtgatcgacatgttgggtcttcaggactccaagcagacc
gtcacagcggtggagaagctggctggtggtctgagcgctctcagtgatgtctacgtggtg
tccacgttccggctgccggcgaagctgggcggggttctgttcggcctctacagcaagcag
gacaacaggaagtacctggaggttgccgtcatggggaagatcaacaaagttctggtccgg
tatgttaaagctgacgggaaggtgcacacagtgaacctgcagaactccaacctggctgat
ggccggactcactccatcattgttagacttggcggacttcagcgcaacaacatgcaggtg
gagctctacgttgactgccgattggccgactccagtcagggcttgccgccattggttcct
ttgcccagagaggcagagatggtggagatcagacatgggcagaagtcctacgctcgactc
cagggggcagtggagtccctccgcctggctctagggggcagtgtcgctaaagcaggagct
ctgactgactgtcccttccaaggagatgcatcatcctacagctcagtgaacgctgaggtc
cactccatcttgggtgaacacactaaggctctgattggtcagttaatcatcttcaaccag
atcctgggagagctgcggcaggacatcagagaacaggtgaaggagatgtctctgataagg
aacaccatcctggagtgtcaggtttgtggtttccacgagccccggtcccgctgctcccct
aacccctgctacaaaggtgtgtcctgcatggacagtctacagtaccctggatacacctgt
ggtccatgtccacctggaaccaccgggaatgggacacattgcatggacatcaacgagtgt
gacctccagccctgttatttacctgaagcctgcatgaacactgaggggggcttcagctgt
aagccatgtcctccaggcctgtggggggtgccgctgtctgggactggactgaactttgcc
aagaccaacagacaggagtgtgtggatatcgacgagtgcctcgatctccctgatgcctgc
gtagcaaactcagtgtgcatcaacaccgtgggttcttataagtgtggaggctgtaaacct
ggtttccttggcaaccaaacatcaggctgcttccccagaaagtcgtgtgctgcgttgacc
tttaacccctgtgacagtaacgcccactgcaccatggagagaaacggagaggtggcctgc
aggtgcaacgtgggctgggccgggaatggacacacctgtggggtggacacggacatcgac
ggttatccggatcgatccctgccttgcatggacaatgacaaacactgcaaacaggacaac
tgtgtggtgactccaaactccggtcaggaggatgctgataatgacggggtcggagaccag
tgtgatgaggatgcagatggagacggcattaaaaacgtggaggataactgccgtctgact
cctaacaaagaccagcagaactcggacagcgactcgtttggagactcgtgtgataactgc
cccaccgtccccaacagcgatcagaaggacacggacaacaatggacagggagacgcctgc
gaccaggacatcgacggggatggcattcccaatgttctggataactgtcccagggtacca
aacccaatgcagacagatcgagaccgagacggagtcggagacgcctgtgacagctgtcct
gaactcagtaaccccatgcagacggacgttgacaacgacctggtgggagacgtctgtgac
accaacatggacacggacggagacggactccaggacaccagagacaactgtcctgacatc
cccaacagctcgcagctagactcagacaacgatggcctcggggacgactgcgaccacgat
gacgacaatgacggcgtccttgatgactttgataactgcagactcatcatcaacccgaac
cagaaggactcagacgctaacggtgtcggagacgtttgtgagaacgacttcgataacgac
gccgtgatggatctgatcgacgtgtgtccggagagcgctgaggtcacgctgacggacttc
agagcctatcagacggtaatcctggaccccgagggcgacgcccagatcgaccccaactgg
gtggtgcttaatcagggcatggagatcatccagacaatgaacagtgatcccggtttagcc
gttggctacacagcgtttaacggcgtggatttcgagggaacgttccacgtcaacacagtg
acggacgacgactacgccggctttatcttcggctaccaggattcctccagcttctacgtg
gtgatgtggaaacagacggagcaggcatactggcagtccatcccattcagagccacggcc
cagcccgccctgcagctcaaggcggtgaagtccagaaccgggcccggcgaatttctgagg
aacgccctgtggcacactggagacacacctggagaggtgaagctgctctggaaggaccct
cgaaatattggctggaaggacaaaacctcgtatcgctggcagctcagccatcggccacag
gtgggatacatcagggtgaagctgtttgaggggatggacctggtggccgactctgacgtt
gtcatcgacaccacgatgagaggaggaaggctcggagtcttctgcttctctcaggagaac
atcatctggtcaaacctaggctacaggtgtaacgacacggtgcctgaagactttaagtct
catcgtaaacaagtggtgatgcacattcaggtctga
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