Nothobranchius furzeri (turquoise killifish): 107379145
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Entry
107379145 CDS
T05163
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107379145 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
107379145 (rbm8a)
03015 mRNA surveillance pathway
107379145 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107379145 (rbm8a)
03041 Spliceosome [BR:
nfu03041
]
107379145 (rbm8a)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107379145 (rbm8a)
Spliceosome [BR:
nfu03041
]
Complex C
Other components
EJC/TREX
107379145 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
107379145
NCBI-ProteinID:
XP_015805233
UniProt:
A0A1A7Z856
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All DBs
Position
sgr05:complement(48022939..48032141)
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDDSIHKLKEKAKKRKGRGFGLEEGARSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggaccttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgacagcatccacaagctgaaagagaaggccaagaagagaaaaggacgaggcttt
ggtttagaggagggagccaggtccagagctaaagaggactatgatacagtggaacaagac
ggggatgagccaggtcctcagagatctgtggagggctggatcctgtttgtgaccggtgta
cacgaggaagccactgaggaagacattcatgacaagttttcagagtttggagaaatcaaa
aacctgcatctcaaccttgatcgtagaacaggctatctgaagggctatgcgctggtggag
tatgagacatacaaagaggcacaggcagccatggaaggtctcaatggtcaggatctgatg
ggccagactatcagtgtcgactgggcgtttgtcagaggcccccccaagaacaaaaggagg
ggtggtgggcgacgacgtagcaggagtccagacaggagacggcgttaa
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