Nothobranchius furzeri (turquoise killifish): 107379440
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Entry
107379440 CDS
T05163
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfu03009
]
107379440 (nop2)
Enzymes [BR:
nfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107379440 (nop2)
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107379440 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
DUF383
Motif
Other DBs
NCBI-GeneID:
107379440
NCBI-ProteinID:
XP_015805678
UniProt:
A0A9D2YUK9
LinkDB
All DBs
Position
sgr05:61001843..61011369
Genome browser
AA seq
733 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKAKKQHGAEVELAKFITDEETGPKPLSRRAKKRAAKRDQNAKK
TQDAAQKQPKKGFSDENSKWLKPTKGKRKLPEPESGDESEELWEDEDDEEVEEEQQLVQK
KSGKDKEKNTKKLGLEEEEEDDDDDDEMVDDYGTLGSEDEAGEDSDGDDLLPIEKAAKKE
KKLKDSMDLESDEEEDDDEEEQKSNADVDEDGTIQTNAEDMDKFRLPTAEESEKEGVLSL
DLKTVYQRIKDNIDVLCNFSSKREEGKDRVEYLALLRKDLCTYYSYNEFLVEKLMDLFPL
SELVDFLEANEIHRPVTIRTNTLKARRRDLAQALINRGVNLDPLGKWTKVGLVIFDSSVP
IGATPEYLAGHYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTYIAQLMRNTGVIVA
NDANKERLKSVVGNIHRLGVTNTVVCNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPA
VKTSKDEVDIQRSAHLQKELILSAIDSVNAASPTGGYLVYCTCSITVEENEWVVDYALKK
RNVKLVPTGLDFGKEGFTSFKQFRFHPSLRLTRRFYPHSHNMDGFFVAKFKKFSNVIPSA
AAGKGDEKTDVAEATEAADSDKASQTKADGSKQNAKTNGAPAKKSGNLKSAEKKDLKAGP
KKAKIARMEVKTEKGTEVKKSFSGPKVSTANKGGSKFEKKQGKKTKPSMKNKNRTGKNKF
KKMKPKWQKQNKK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaggtgaaaagaggcccgggtaagaaagccaag
aagcagcatggagccgaggttgagctggcaaagtttataacagatgaggaaacgggacct
aaacctctgtcaaggagagccaagaaaagagctgcaaagagggatcaaaatgcaaaaaag
acccaagatgctgctcagaaacaaccaaagaaaggattcagtgatgaaaacagtaaatgg
ttgaaaccgaccaaggggaagcgcaaactccctgaaccagaaagtggagatgaaagtgag
gaactctgggaagatgaagatgatgaggaggtggaggaagagcagcagcttgtgcagaag
aaaagtggaaaagataaagaaaaaaatacaaaaaagttgggattggaagaagaagaagag
gatgatgatgatgatgatgaaatggttgacgattacggcactcttggcagtgaagacgaa
gcaggagaagacagtgatggagatgatcttcttccaattgaaaaagctgccaaaaaagag
aaaaagctgaaagattccatggatctagagagtgatgaagaagaagatgacgatgaagag
gagcagaagtcaaatgctgatgtggacgaggatggcacgatacaaaccaacgcagaagat
atggataaattcagattgccgactgcagaggagagtgaaaaagagggtgttctgtctcta
gacctgaagaccgtctaccagagaataaaggacaacattgatgttctttgtaatttctcc
tctaaaagggaagaagggaaagaccgagtggagtacctagcgctcctaaggaaggatctc
tgtacttattacagctacaacgagttcctggtggagaagttaatggacctcttccctctg
tcagagttggtcgatttcctcgaagcgaatgaaattcacagaccggtcacgattcggacc
aacacgctgaaagcacggcggcgagacctcgcccaggctttaatcaacagaggagtaaac
cttgatccactgggtaaatggactaaagtgggtttggtcatctttgactcgtctgtacca
atcggcgcgaccccggagtacctggctggtcattacatgctgcagggagcctccagcttt
ctgccggtgatggcgctctcgccgcaggagggagagctggtgttggacatgagctcagct
cctggagggaaaaccacctacatcgctcagctgatgagaaacaccggagtgattgttgct
aacgatgcaaataaagaaagactgaagagcgtggtgggaaacattcatcgtctcggagtc
acaaacacagtggtctgcaactacgatggccgccagttcccaaaggtgatgggtgggttt
gatcgagtgctgctcgatgcgccgtgctcggggaccggagtcatcgctaaagacccagca
gtgaaaaccagcaaggacgaggtggacattcagcgctctgcccatttacagaaggaactg
attctgtctgctatcgactcggtgaatgcagcgtctcctaccggagggtatctggtctac
tgcacatgctcgataacggtggaggagaacgagtgggtggtggactacgctttgaaaaaa
agaaatgtcaaattagttccaacggggctggacttcgggaaggagggtttcaccagtttc
aaacagttcagattccatccttctctgcggctcacgcgacggttttacccgcactcccac
aacatggatgggttctttgtggccaagtttaaaaagttctccaatgtaattccttctgct
gctgctgggaaaggagacgagaagactgatgtggctgaggctacagaagccgccgattct
gacaaagcctcccagacgaaggctgacggctcgaagcagaacgccaaaacaaacggggcg
ccagccaagaaatcaggaaacctcaagtcagcagaaaaaaaggacctaaaggctggacca
aagaaggcaaagatcgccaggatggaagtaaagactgagaaagggacagaggttaaaaag
tccttcagtgggcccaaggtgtccacagctaacaaaggaggaagcaagtttgagaagaag
caaggcaaaaagacaaaaccgtccatgaagaacaagaacagaacgggaaagaataaattc
aagaagatgaagcccaagtggcaaaagcaaaataaaaagtga
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