Nothobranchius furzeri (turquoise killifish): 107379478
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Entry
107379478 CDS
T05163
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107379478 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107379478 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107379478 (usp5)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107379478 (usp5)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107379478 (usp5)
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107379478 (usp5)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107379478 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
107379478
NCBI-ProteinID:
XP_015805732
UniProt:
A0A9D3C2M2
LinkDB
All DBs
Position
sgr05:61506404..61517499
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AA seq
848 aa
AA seq
DB search
MTDVGEVLMSVLSTIRVPKPGDRVHKDECALSFASPESDGGLYVCMNSFLGFGSQYVDRH
HARTGHRAYLHITRTRKAKKEDDNNSGSGHPPKKKPTRLAIGIEGGFDVEQDQYEEDVKV
VILPDRQEVTSEDLATMTDVVRERVSLSMTGIMTADSVSHALQVQQWDGEVRHESKHAAD
LKQLDNGLKIPPSGWRCEVCDLQENLWMNLTDGKVLCGRRYFDGSGGNNHALLHYQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLKPLFGPGLTGMRNLGNSCYLNSVMQVLFTIPDFQSKYVSNFDKII
NDAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGDENGASEPRGDQIGIAPQMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGSNPSEAFRFLVEEKIVCQQSQKAKYTQR
VDYIVQLPVPMDQATNTEELQEAERRREEGDLLAPTVRAQIPFSACMAALSEPEILTDFW
SSAVQAKTSATKTTRFASFPNHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSALRATG
QQPGEELLPEVAPPPLMTPDTEVKGILGFPGNEEDDSLYSPLLSPVLDDSTVSQLCEMGF
PLEACRKAVYYTGNTGIDAAMNWIMSHMDDPDFSAPLVLPGSSTGPGTTPTESLSEEHLA
TIVSMGFSRDQATKALRATSNILDRAVDWIFSHMDDLESMDVSEGGRSAAESEGGRDPPP
GPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYL
YFYRRVAE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgttggtgaggttttgatgtcggttttgtccacaattcgtgttccgaagccg
ggggaccgtgttcacaaagatgaatgcgccctgtcatttgcttcgccggagagtgatgga
ggcctgtacgtgtgcatgaacagctttctgggctttggtagtcagtacgttgacagacac
catgctcggactggccatagggcttacctgcacataacccggactcgtaaggccaagaag
gaagatgacaacaactctggctctggacacccacctaagaaaaagcccactaggctggca
atagggattgaaggaggctttgatgttgaacaagatcagtatgaggaggatgtaaaggtg
gtcattttaccagacagacaggaagtgacttcagaggatcttgctacaatgactgatgtt
gtcagagagcgggtgtctctgtcaatgacgggtatcatgaccgccgactccgtgtctcat
gccttacaagtccagcagtgggacggagaagtgagacacgagtcgaagcatgccgccgac
cttaaacagctggacaatggactcaagatccctcccagcggctggcgttgtgaagtctgt
gaccttcaggaaaatctgtggatgaacctgacggatgggaaagtcctttgcggtcgcagg
tattttgacggctctgggggcaacaaccacgctcttctccactaccaggagaccggttac
cccctcgctgtcaaacttggtaccatcactccagatggtgctgatgtgtattcctatgat
gaggatgacatggtgctggattccaagttaccggagcacctaagtcactttggcattgac
atgatgactatggagaagacggagaggacaatgacagagctggagattgctgtaaaccag
cgtgtgggggagtgggaggtgatccaggagtcgggtaccaccctgaagcccctgtttggc
cccggcctgactgggatgaggaatctggggaacagctgctacctcaactccgtcatgcaa
gtgctcttcaccattccagacttccagagcaagtacgtgtctaactttgacaagatcatc
aacgatgcgccgagcgacccgacccaggacttcaaaactcaagtagccaaactgggttat
ggtctgctgtcgggagagtactccaaaccagcaccggaccccggcgatgaaaacggtgcc
tctgaacccaggggagaccaaatcggaatagcaccgcaaatgtttaaagcactcgttggc
cgaggccaccctgagttttccaccaaccgacaacaggatgctcaggagtttctattgcac
ttcataaacatggtggagaggaactgtcgctctgggtccaatccatctgaagctttcagg
tttctggtggaggagaagatcgtttgtcagcagtcgcaaaaagccaagtacacacagcgg
gtggactacatcgtgcagctgcctgtgcccatggatcaggccaccaatacagaggagctt
caggaggcggagcgccgtcgggaggagggtgacctattagcaccaacggtgcgtgcacag
atcccgttctccgcctgcatggcggctctcagcgaaccggaaatactcaccgacttctgg
agctcggcggtgcaagccaagacttctgctaccaaaacaacccgctttgcctcgttcccc
aaccacctggtaatccagattaagaagttcacctttggccttgactgggtgcctaaaaaa
ctggatgtgagcatcgacgttcccgatactctagatctgagtgctctgcgcgcaaccggt
cagcagccaggggaggagcttttaccagaggtggccccgcccccactcatgaccccagat
acggaggttaaaggtatcctgggtttccctggcaacgaggaggacgactcgctctactcc
ccactgctgtctccagtcctcgacgactcgactgtgtcccagttgtgtgaaatgggattc
ccactagaggcctgcaggaaagcggtgtattacactggaaacactggaattgatgctgcc
atgaactggatcatgagccacatggatgatccggacttctcagcccccctggtgttgccc
ggcagcagcactggacccgggaccactcccaccgagagtctgtctgaggagcacctggca
acaatcgtctcaatgggcttcagtcgagatcaggccaccaaagctctccgagcaacaagt
aacatcctggaccgtgcagtggactggatcttttctcacatggatgatctggagtccatg
gacgtgtctgaaggtggtcgctcagctgcagagagcgaaggtggcagggatcctccacct
ggacctcgtgtccgggacggaccaggcaaatacgagctttttgcattcatcagccacatg
gggacgagcaccatgtgtggccactacgtctgtcacatcaagaaggaccagcaatgggtc
atcttcaacgatcagaaggtttgcgcttcagagaagcctcccaaagacctgggatatctt
tacttctatcgtagagtggccgaatga
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