KEGG   Nothobranchius furzeri (turquoise killifish): 107379490
Entry
107379490         CDS       T05163                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107379490 (mdc1)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107379490 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 107379490
NCBI-ProteinID: XP_015805747
UniProt: A0A1A7ZYN9
LinkDB
Position
sgr05:61750240..61765578
AA seq 1787 aa
MDATQAISDAILESEEEENEENENRRGSPLAKLCILKNPHVPEAELPLFLGDNVLGRDPS
LCTLPMAASSVSKQHATICISVYRRRGARCDVDMEALVWDLGSMNGTRKGRLKLTPNVRY
ALSEGDSLVLADIPCQYVRWGGVSSQDDMKIPGCVLSGVKGTFPDAPGGKQGDTDRGSKR
GVNSGAKATKTPVRGSFLSFEQTPTQPKGCLVPDSDSDSDGERDGGGIGHQKTRVSDSDS
HISSPNSSAFLSPSNKIVPESEDESPVTLSFSSQPSRHVSFNTEKSDVCVERNRSPNDET
DGKGGTASKDSGQNQNGESNVTFREDESLVSTPEVSREAIPDFNMDSDTDVEAEEEGVPA
EPLSFNTSQRADQRSDEPSEAHSDETTKPAHVASGIQPEDIIIDSDTDDDDDDVSDAVIK
ASSFQDAHTADAASSVQLKDFHLDSDTDVEEEIKSNLNPAAAAGDPSVAAATAESSSPAA
AGPDLDILSDSDTDMEEDCLLVKPLVTEDPSEVSGKAPGALESDSDEDTDVDEPCVTHAG
DSPAELRVDGDASAEDQEEDAEEAGEDHIPHLPLVPTLQNYSTPVQVSGEVEDLETQAFT
STPSGLFRCPALNPAVPLSSDSPEDEDYAEAETQPFVLQTRDRQTAADPKPSSAPEPKAD
DPRGSFQLGLSDSRHRALATENTQAYVSADGRVNLEETQAYEATSNLDATQAYEEEEEPV
RDSEESETKVCVNLALEATQAYVSDSCDDSDEDKRQDAAPTETTELTDHSSALATAETQP
VPSFEEESLEIRNPVCSVQSVETKERDPAQPREKHLFEAETQPMCMTDTEEGDDEDSTAP
LQLQEDPTEPQTCSPSALAETQPMHVDEGENDDDSVPLKAKRLSVEEEESQRLGGSDAYV
AETQPVFVSEDDDEGDWGPRRREAKPPQLEEEQTRPQISSDVSSRPEDPGEENDSEILVV
PRKRKAKQLHIEDESQQLLSSAETQPTRGEDVEAGPQGGEAMPLQRDEGQINPSTEVAGV
DKHDHKDAVTAKQHDLKETTVSAEADPPSVSNSRQTRARLRGKEDADGSASTKRRTRQES
KTLPSTRGSRGKAVTQSEEDVKQCKQARGRKNTRRQEDEEDDNKIIAAKEAIKGQKEGNL
EQDEKESERMHASVTKEKQEWVEQERRNQGELKNKEKASAERLQGGELEESEGKRDEEEK
LNVSARPRRSARKTAPCAAGPEQPSTISTREDFAARRTRSHSNSSNSVSSERSASSVSAQ
ESRGRGRGEKRSSEALQTPVTRSSRRRTTATVAPIEKGREAVRSEISTCSESPQNRARGC
RQRGKGRKTVSDLQNSTERVGKTGRAEELSSEVLPMGDEDKGDAQQPATSRGQQRVGTNA
KHQSHQEEESVEEKSPLPKRRTGGRGHVEEPVALSVSEEGRNKRKGRKSELEVNIKADGA
SVFKGKALKATEREEGKDERIEESSSTVQVRRTSRASSAQVKKNAKEPPPGEPVEDGETM
EVQAAERRTRVRTANKEEVKEGGTSASSMKQEAPATPDSRVSRKRRASSDSSPLAKTPRS
SSGSPAAIGRLRAGSQSYKVLFTGVVDEGGERELARLGGGMAKGVADMNCLVTDKVRRTV
KFLCAVAKGVPVVTTDWLEKSGKAGSFLPTDVFVVKDPEQEKKFSFCLQESLRTARSRRL
LQGYEIHVTKSVKPEPVHMKDILSCSGATFLSKMPSSHKPQTVVISCEEDWRLCGPAVSA
SLPVVSTEFILTGILQQKLDFHTHALSPSSAANSQPAGDRGRTRRKT
NT seq 5364 nt   +upstreamnt  +downstreamnt
atggatgcaactcaggcgatcagtgacgcaatcttagaatcagaggaggaagaaaatgaa
gagaatgaaaataggagaggaagtcctttggcgaaactgtgcatcctaaagaatccacac
gtccctgaggcagagttgcctctatttttgggagataacgtgttgggccgtgaccccagc
ctctgcacactacccatggctgcatcatccgtgtccaaacagcacgccaccatctgcatc
tctgtttaccgcagaagaggggcccgctgtgacgtagacatggaggctttggtctgggac
ctggggagcatgaatgggacgcgtaaggggcggttaaagctgactcctaatgtacgctat
gccctcagtgaaggtgacagcttggttttggccgacatcccatgtcagtatgttagatgg
ggtggagtctcttctcaagatgacatgaagatcccagggtgtgttctatcaggagtgaag
ggcacatttcctgatgctccaggaggaaaacagggtgacactgacagaggcagcaagaga
ggtgtcaacagtggagcgaaggcgacgaagactcctgtcagaggcagttttctgtccttt
gagcaaactccaacccagccaaagggctgcttggtccctgattctgactccgactcagac
ggtgaaagagatggtggaggaatcggacaccagaagacacgagtgtctgattctgactcc
cacatatccagtcccaactcatctgcattcctaagtccctcaaacaaaattgttcccgaa
agtgaggacgaaagccccgtcacactgtccttttcctctcagccatccagacacgtcagt
ttcaacacagagaagtcagatgtttgtgtggagagaaacaggtcacctaacgatgaaact
gatggcaaaggagggacagcttctaaagacagcggacaaaatcaaaatggggagagcaac
gtgaccttcagagaagacgaatccctcgtgtccacgccagaagtctccagagaagccatc
cctgatttcaacatggatagtgacactgatgtggaggctgaggaggagggggtgcctgcc
gagcctctgagctttaataccagtcagcgagctgatcagcgatcagacgaaccttctgaa
gctcactcagatgaaacgaccaaacccgctcatgttgcatcaggtatccagcctgaggac
atcatcatagacagtgacactgatgatgatgatgatgatgtgtcagatgcagttatcaaa
gcctcatcatttcaggatgcacacacagctgatgcagcttcttcagtgcagctaaaagat
ttccacctagacagcgacacggatgtcgaggaggaaatcaaatcaaatttgaaccctgct
gctgcagccggtgacccctcagtggctgctgccactgcagaatccagcagcccagcagct
gcaggacctgatctggatattctgtctgacagcgacacagacatggaggaggactgtctg
ttagtgaagcctcttgtcaccgaagacccgtcagaagtttctggtaaagcgccaggagct
cttgagtcagattcagatgaggacacggatgtggatgaaccctgcgtgacacatgccgga
gacagtccagctgagctcagagtggacggcgacgccagtgcggaggatcaggaggaggat
gctgaagaggcgggtgaagaccacatccctcatctccctctggttccaactctgcagaac
tactctacccctgttcaggtttcaggggaggtcgaggacctggagactcaggccttcaca
agcacgccgtcgggtctgtttagatgtcctgctttaaatcctgctgtgccgttgtcctca
gacagcccagaggatgaagactacgctgaagctgaaacacaaccctttgttcttcagacc
agagatcggcaaacagccgcagacccgaagccgtcctctgcaccggagcccaaagcagac
gacccaagaggctcatttcagctgggtttgtccgacagccgccatcgagctttggccacg
gagaacacccaagcttacgtctcagcagacggaagagtaaacctggaggagacccaggca
tatgaggccacctcaaacctcgacgctacgcaggcctatgaagaggaagaggagcctgtc
agagactctgaagagtctgaaactaaagtttgtgtaaatttggcgcttgaagcaactcaa
gcttatgtctcggactcttgtgatgattcagatgaagataagagacaggatgcagcaccg
accgagactacagagctcacagatcattcctctgctcttgcgactgctgaaactcaacca
gtgccttcttttgaagaagagagcttagaaattaggaatccagtttgttctgtgcagagc
gtagaaaccaaagagagggatccggctcagcctcgagagaagcacctctttgaagcagaa
acccagcccatgtgtatgacggacacggaggaaggcgatgacgaagactcgacagcacca
ctgcagcttcaagaggatcccacagagcctcaaacgtgctcgccgtcggctctagctgaa
acccagcccatgcatgtcgatgaaggtgaaaatgacgacgattcagtgccacttaaagca
aaacggctttctgtcgaagaagaggagtcacaaaggctgggaggttctgatgcttatgtc
gctgagacccaacccgtttttgtgagcgaggatgacgatgaaggtgactggggtccacgc
agaagagaagccaagccgccgcagctcgaagaggagcagactcggcctcagatcagctct
gatgtttcgtctcggccagaagatcccggagaggaaaacgacagcgagatcctagttgtt
ccacggaaaaggaaagccaagcagcttcatattgaagatgagagccagcagctactgagt
tctgctgaaacacagcccacgcgtggagaagatgtagaagcaggtccacaaggaggagag
gcgatgccactgcagcgggacgaagggcagataaatccgagcaccgaggtcgctggcgtc
gacaaacatgatcacaaggacgcagttacagcaaagcagcacgatcttaaagaaacaacc
gtctctgccgaagccgatccacccagtgtttcaaactccaggcagacgagagcgagatta
agaggaaaagaagatgcagatggttctgcatctacaaagagacggaccagacaggaaagt
aaaacgctgcctagtaccagaggaagtagaggaaaagccgtgactcagagcgaggaagac
gtgaagcaatgcaagcaggcgagagggagaaaaaacacaagacggcaggaagatgaagag
gatgacaacaagattattgcagctaaagaagcaataaaggggcaaaaagaaggaaacctg
gaacaagacgaaaaggagagcgaaaggatgcacgccagtgtcacaaaagaaaaacaggag
tgggtggagcaggagcgaagaaaccaaggagagctgaaaaataaagaaaaggcatctgca
gagcgactacaggggggagagttggaggaaagcgaggggaaacgagatgaagaagagaag
ctgaatgtttctgcaagacctcgaaggtcagcgaggaaaactgctccgtgtgcagctgga
ccagagcagccctcaaccatttctacccgggaagatttcgccgcgaggagaaccaggtct
cactcaaactcttccaactcggtcagttcggaaaggtctgcttcaagcgtcagcgcacag
gagagtagaggacgagggagaggagagaagaggagcagcgaggcgctccagacacccgtt
actagaagcagccgaagaagaacgacggccaccgtagctccgatagagaagggccgcgaa
gccgtccgctcagagatctccacctgcagtgagagccctcagaacagagcgaggggctgc
aggcagcggggaaaagggaggaaaacagtttcggacctccagaattccacagagagggtt
gggaagaccgggagggctgaggaattgtcttctgaggttctgcctatgggtgatgaagat
aaaggagatgctcaacagcctgccaccagtagggggcagcagcgagtcggtacaaatgct
aagcaccagtcgcatcaagaggaggaatcagtggaggagaaatctcctctgcccaagagg
aggaccgggggcagaggtcatgtggaggaacccgtagctctgtctgtcagcgaggagggt
cgaaataagaggaaagggaggaagagtgagttggaggtgaacataaaagcagatggtgcc
agcgtttttaaaggaaaagccctgaaggcaacagaaagagaagaagggaaggatgagcga
atcgaagagagttcctccacggtccaggtgaggagaacaagtagagcttccagcgctcaa
gtgaagaagaatgcaaaggagcctccccctggagagccggtggaagatggtgaaaccatg
gaggtgcaggccgctgagaggaggaccagggttcggacagcgaataaagaggaggtgaag
gaaggtggaacgtctgcatcatccatgaagcaggaagcaccagcaactccagacagccga
gtttcccggaagcgacgggcctcgtctgactcctcccctttggcaaagactcctcgctct
tcttctggttccccggcagcgattggtcgactacgagccgggagccaatcctacaaggtg
ctgttcaccggggtggtggatgaaggcggggagcgggagttggctcgactgggaggcggc
atggctaaaggcgtggcagacatgaactgcctggtgacggataaagtgcgaagaacagtc
aaattcctgtgcgccgtggccaaaggcgtccctgtcgtcaccacagactggctggaaaag
agcggcaaagctggaagcttccttcctactgacgtttttgtggtgaaagatcccgagcag
gagaagaagttcagcttctgcctgcaggagtctctgaggactgccaggagtcggcgtctc
ctgcaggggtatgagatccacgtgacaaagtcggtaaagccagagccagttcacatgaaa
gacatcctttcctgcagcggagctacctttctgtcaaagatgccctcgtctcacaagccg
cagaccgtggtgatttcctgcgaggaggactggcgactgtgtggccccgccgtgtctgcg
tcgctccctgtcgtcagcaccgagttcatcctcacagggatcctgcagcagaaactcgat
tttcacactcacgcactttcgcccagttctgcagctaactcgcagcctgcaggggacaga
ggaagaaccaggaggaagacttag

DBGET integrated database retrieval system