Nothobranchius furzeri (turquoise killifish): 107379526
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Entry
107379526 CDS
T05163
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107379526
04121 Ubiquitin system [BR:
nfu04121
]
107379526
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
107379526
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107379526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
107379526
NCBI-ProteinID:
XP_015805805
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Position
sgr01:complement(44641766..44644555)
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AA seq
669 aa
AA seq
DB search
MTTRKMEEAETNNISLGERCDNTPRQIFNAPGKQKSKVWTVFGFYKMAGKLDRSHAICKL
CRASLTYSGSITNLDQHAKRKHGEEYGEFTEQKRVGTSGKQARTENAIPTFFQRLGQNSA
RAREITASITRFIAKGLCPYNIVEWEGFQDLIHTLEPRYKIPSRNHITNTCMPALYAQVK
SQVEEKLAKAERVAITTDAWTSCATESYVTITAHHIAPDWELHVYVLQTRAFKGSHTGKN
VGALLKQACADWKILDKEPALVTDNATNMVLAGVEAEMTPHLMCFAHTINLATQKAFKMD
TVARLLGKVRRVVGFFHRSVRAAEILQDKQKQLALPTHKLIQDVSTRWNSTQIMLERVLE
QQPAISAALMSRDLRRGEELNTLKDKDFCDVEDIVKLMVPVKLVTISMCEDKRPTLSVIS
PVREKLKKTFEAADEDSVVIREMKQAFREDLEKRYTGLEDLFHTAAALDPRFKSLPFLTD
HDAERTFANITAKATSLHNKALATGDPFHGGPLQTTPCQTEPALGELGIRIDAPQTQHEP
EDDLPPFKKKKISALDQLLGKDFDVRMAATSVRDKASEEVKRYRERASLPLEENLLQWWK
EQQDLPLLSSLAKRYLCIPATSVASERVFSTAGDIVSTKRSLLKHEHVDQLIFLKKNLPS
KKKLNSDQE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacgaaaaatggaggaggcggagaccaacaacattagcctgggcgaaagatgt
gataatacaccgagacagattttcaacgcaccgggaaaacaaaaatccaaggtttggaca
gtgtttgggttttataagatggcggggaagctcgacagaagccatgctatttgtaaactt
tgtagagcctcgttgacctactccgggagcattacaaatctggaccagcatgcaaagaga
aaacacggtgaagagtacggtgagtttaccgagcagaagcgtgtaggaaccagtggcaaa
caggcaaggacggagaacgccattcctacttttttccagcgacttggtcaaaactcagca
cgcgctagggaaatcacggcatcaataacacgttttattgccaaaggattatgtccttac
aatattgtcgagtgggaaggatttcaagatttgattcatacattagagcccagatataag
ataccgtcccgaaatcatatcaccaacacgtgtatgccagcgctgtatgcccaggttaag
agccaagttgaagaaaaactggcaaaagcagaaagagtggcaataactactgatgcttgg
acgtcatgtgcaacggagtcatatgtgaccatcacagcccaccacatcgctccggattgg
gagttacatgtttacgtcttacagacccgggcattcaaaggatcccacactgggaagaat
gtaggtgctctgctgaaacaggcatgtgctgactggaagattctagataaagagccagct
ctggtaactgacaacgccacaaacatggttttagctggcgttgaagcagaaatgactcct
cacctcatgtgctttgcacacactataaatctggccacacagaaagccttcaaaatggac
acagtagcaaggttgctgggaaaggtgagaagagtggttggcttttttcaccgcagtgtc
agggcagcagaaattctacaagacaaacagaaacaacttgctttgcctacccacaaactc
atccaagacgtgtccacccggtggaatagtacccagattatgcttgaacgggtactcgaa
caacagcctgccatctctgctgcactcatgtccagggatctcagaagaggagaagagctt
aacactctgaaggacaaagacttctgtgatgttgaagacattgtgaagctgatggtgcca
gtcaaacttgtgacgatcagcatgtgtgaagacaagcggcccacactctcagtgatttcc
cctgtcagagaaaagcttaaaaagacatttgaagcagcagatgaagactcggtagtaatc
agagagatgaaacaagcattcagagaggacttggagaagcgctacactggcctggaggat
ctgttccacactgcagcagctctggacccccgcttcaagtctctgcccttcctgacggac
catgatgctgagcggacgttcgcaaacataacagcaaaagctacatccctgcataacaag
gctttggcaacaggggatccattccatggaggcccactgcagaccactccatgccagact
gaacctgcccttggagagctgggcatcaggattgatgcccctcagacccaacatgagcca
gaagatgatctccctcctttcaaaaagaagaaaatatctgccttggaccagctgttggga
aaagactttgacgtgaggatggcggctacatctgtgagagacaaggccagtgaagaagtc
aaaaggtacagagagcgtgcttcattgcctctggaagaaaatcttctacagtggtggaaa
gagcagcaggacttgccactgctgtcatctcttgctaaaagatacctctgcatcccagcc
actagtgtggcctctgaacgggtgttcagtactgctggagatattgtttctacaaaacgc
agcctactcaaacatgagcatgtggatcagctcattttcctgaagaaaaatctgccctcc
aaaaaaaaactgaacagtgatcaggagtaa
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