Nothobranchius furzeri (turquoise killifish): 107379587
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Entry
107379587 CDS
T05163
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04810
Regulation of actin cytoskeleton
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107379587 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107379587 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107379587 (itga10)
04810 Regulation of actin cytoskeleton
107379587 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107379587 (itga10)
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin alpha subunits
107379587 (itga10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_2
Integrin_A_Ig_3
FG-GAP_3
vWA_SIBA-E
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
107379587
NCBI-ProteinID:
XP_015805881
UniProt:
A0A1A7ZQN7
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Position
sgr05:65587742..65647455
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AA seq
1168 aa
AA seq
DB search
MELRKYLLCLEFILLLQAFCQCFNIDVKHPRIFTGPEEALFGFSVLQHEAGGEKSMLVGA
PWDGPPSNRKGDVYKCVVGEEKYSNCSKVNLGETALQNVSKVLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVSDDLEPRETIAPTEQKCKTFMDIVIVVDGSNSIYPW
SEVQNFLSNILSKFHISSNQMQVGIIQYAEIAVHEWSMKDYQTTQEVVEAAKNISRQEGR
ETRTADAINIACTEAFSAERGAREGATKVMIVVTDGESHDGDSLPAALEECESRNITRYA
IAVLGYYIRKGQDPETFIDEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTM
GYNQSTFHMEMSQVGFSTHTLADGILFGIVGAYDWDGGVLMDRASGPIIPSREAFESEFP
LELKNHAAYLGYTVSSVVIGDWKRLYVAGAPRFKHKGKVILFELNDYGDVEIMQALNGEQ
IGSYYGSEVLGLDVDKDGITDVLLVAAPMFLSSGNKEAGKVYIYTLSGEQVFVSNGTLTS
EGKSQDARFGYALAAAPDLNYDGFTDLVVGAPLEDDHRGAVYVYHGQDIYIIHNYKQRIE
GASLSSSLQYFGRSVSSRLDLDGDDLIDLAVGAQGSAVMLRSRSIVQINVSLSFQPHSIN
VIQKTCQRGGRESACLDATACFNAVSRSPGPNGIGFDLWLSAMLDDRKFSARALFDNSSH
RQIQLPVRVQTGKALCYKLPFHVYDTADYIRPISFSLQFKINNTATGPVLDEGWPMTVNK
SIPFFKDCGEDDVCTTDLVLQASMEISGTKQKPYLIQSPRKRLAVEVQLQNRLENAYNTS
LKLHYSRNLHFSSLSIREDYSFKIECTALGPNSHSCNVSYPVFRSQSEVNFMLEFEFSCT
SLHNRVQMKLVASSDSMERDATLGDNSVQLQSFVQYQPDLYVSSYSNLNRYEVHPTRSAS
EALGPEFYTHLRLQNLGCYVLSNLELRMFLPSVAAGDTVFMTITDVYAYNATGVNCRVLS
AVAQLKARQRDVRPLHPEDMMHNEILNCSRSWCTEVTCEVQQLQQDVVIRVSRRAHDDFF
RKAKYKSVRIVSDFDLTAKETNLITLRAGMLRGESVLEVLKGRAIPISLWILIGSIIGGF
LLLALIIFILWKLGFFARKRREDENDED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcaaatacctgctgtgcctggagtttatcctcctcctgcaagcattctgc
cagtgctttaatatagatgtaaagcatccgcggatcttcaccggtccagaggaagctctt
tttggcttttctgtgttgcaacatgaagcaggaggagagaaatcgatgctggtgggagcg
ccgtgggatgggccgcccagcaacaggaagggggatgtgtacaaatgtgttgtaggggag
gagaaatattcaaactgcagtaaagtgaatctaggtgaaactgctcttcaaaatgtttct
aaagttctgaggaattctcacctgggaatgaccctcacaccagactcacctgatggtttc
ctggcatgtgcccctctttggtcacaggagtgtggtacatctatgttcagcaccgggatc
tgcgcctctgtcagtgatgacctggaaccaagagagaccatcgcaccaactgagcaaaag
tgcaagacgtttatggacatcgtgattgtagtggatggctctaacagtatctacccctgg
tctgaagtccagaacttcctcagcaacatcctcagcaagttccacatcagctccaaccag
atgcaggttggtataatacagtatgcagagatagctgttcacgagtggtctatgaaggac
taccagaccacacaggaggtggtggaggccgccaagaacatcagccgtcaggagggccga
gagacgcgcacagcagacgccatcaacatagcctgcaccgaagcgttcagtgctgagcgt
ggagcgagggagggcgctaccaaggtgatgatcgtggtgacggacggggagtcgcatgat
ggggactctctgccagccgctctggaggaatgtgagagccgaaacatcaccagatacgcc
atcgccgttctgggttattacatccggaaagggcaggacccggagactttcatcgacgag
atcaagtacatcgccagcgacccagacgacaagtatttcttcaacgtgaccgacgaagct
gcgctgaatgacattgtggacgctctgggagatcggatcttcaccctggaaggtacgatg
ggctacaaccagagcacattccacatggagatgtcccaggtcggcttctccacgcacact
ttagctgatggtattctctttgggattgtgggtgcctacgactgggatggtggcgttttg
atggacagggccagtggaccaatcatcccatccagagaggccttcgaaagtgaatttcct
ctggagctcaaaaatcacgccgcttatttaggttacacggtctcatctgtggtgatcggt
gactggaagaggctgtatgtagctggagctcctcgctttaaacataaaggcaaagtcatt
ttgtttgagctcaacgattacggggatgtggagattatgcaggccttgaatggagaacag
attgggtcttattatggcagtgaagtgcttgggctggacgtggataaggacggcatcaca
gacgtccttctggttgctgctccgatgtttctcagctcaggaaacaaggaggctggtaaa
gtctacatctacaccctcagtggggagcaggtgtttgtctccaacggtacgctgacatca
gaggggaagtctcaggatgccaggtttggctacgctctggcagcagctccagatctgaac
tatgatggattcaccgacctggtggtaggagctccactggaggacgatcacagaggggcc
gtctatgtctaccacggacaggatatttacataatccataattataaacagcgtatagag
ggggcctctctctcctcgtcccttcagtattttggccggagtgtgagctcacgtctggac
ttggatggagatgacctgatagacttggcggttggagcacagggaagtgctgtgatgctc
agatccagaagcatcgttcagatcaatgtgagtttgtccttccagcctcattccatcaat
gtcatccagaagacgtgtcagagggggggcagggagtcggcctgtctggacgccaccgcc
tgcttcaatgccgtctcacgctcccccgggcccaacgggattggcttcgatctgtggttg
tcagccatgttggatgacaggaagttttcggcgcgagctctgttcgacaacagctcacac
cgacaaatccagctgccggtccgggtccagacggggaaagctctgtgttacaagctgccc
ttccatgtctatgacacagcggattacattcgcccaatcagcttctcgctgcagtttaag
atcaacaacacagcgacgggtccggttctggacgaaggctggccgatgacggtcaacaag
tctatcccgttctttaaagactgtggtgaggatgatgtttgcaccacagatctggtcctg
caggccagcatggaaatctctgggacaaagcagaaaccttacttgattcagagccctcgt
aagcgtctagcagtggaagttcagctccagaacagactggagaacgcctacaacaccagc
ctgaagctgcactattcacgcaacctccatttctccagcctcagcatcagagaggactac
agctttaagattgagtgcacggcgctcggccccaacagccactcgtgcaacgtcagctat
ccggtgtttcgctctcagtcagaggtgaacttcatgttggagtttgaattcagctgcaca
tctctacacaaccgagtgcaaatgaagctcgtcgctagcagtgacagcatggagagagac
gcgactttaggggacaacagcgtccagctgcagagttttgttcagtaccagccggacctt
tacgtcagcagttactctaacctgaaccgctacgaggtccatcccacacggtctgcgtcg
gaagctctcggaccagaattctacacacacctccggctgcagaatctgggctgttacgtc
ttaagtaacctggagctgcggatgtttctgccctctgtggctgcaggagacacggtcttc
atgaccatcaccgacgtttacgcctacaacgccacgggggtaaactgcagagttctgagc
gccgtcgcccagctgaaggccagacagagagacgtgcgtcctcttcatcctgaggacatg
atgcacaacgagatactgaactgcagcaggtcgtggtgcacagaggtcacgtgtgaagtc
cagcagctccagcaggacgtcgtcatccgagtcagccgcagagctcatgatgactttttc
agaaaggccaagtacaagtcagtgaggatcgtgagtgactttgacctcacagctaaagag
acgaatctcatcactctgagggcaggaatgcttagaggggagagcgtgttggaggtgctg
aagggccgagcgatccccatctcgctctggattttaatcggcagcatcataggtggtttc
ctgcttctggcgctcatcatcttcatcctgtggaagctcggattctttgcacgcaaacgg
agagaggatgaaaacgacgaggactga
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integrated database retrieval system
