Nothobranchius furzeri (turquoise killifish): 107379600
Help
Entry
107379600 CDS
T05163
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107379600
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107379600
Membrane trafficking [BR:
nfu04131
]
Protein recycling
Others
Others
107379600
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107379600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
RA_2
SNX17-27-31_F1_FERM
PDZ_2
DUF5394
SNX17-31_F2_FERM
SNX17_FERM_C
Motif
Other DBs
NCBI-GeneID:
107379600
NCBI-ProteinID:
XP_015805908
UniProt:
A0A1A8U623
LinkDB
All DBs
Position
sgr05:complement(66053263..66071249)
Genome browser
AA seq
570 aa
AA seq
DB search
MADITGQIISPSVPPLPQPSSRNGSGSGNVTPDTGGSCWQTTPTTVTSGPRLVRIVKSDS
GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVSKGDRILEVNGVNVEG
ATHKQVVDLIRAGEKELVLAVLSVPPQEADCLDPGDDGSALSCYDYSDKQAVPISIPSYK
HTELGSEKFVVYNVYMAGRQLCSKRYREFVVLHQNLKREFSNFTFPKLPGKWPFSLSEQQ
LDARRRGLEEYLEKVCSVRIVGESDIMQEFLSDSDENYNGVSDVELRIAMPDKTTLTVRV
CKNSTTDQVYQAVVMKLGTDGVTASCFALFEVINHTFVRKLAPNEFPHKLYIQNYTSAIP
GTCLTLRKWLFTTEEEILLNDNQLAVSFFFHQAVDDAKKNFIKVEEKSYQLQKLAEQKKM
SLYLSLLRSCEGYNEILFPHCSCDSRRKGHVITAISIHNFKLHACTEEGTLENQVIAFDW
GEMQRWDSDKEGGAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELRWRKEVEEEA
TDEDNRNGSKDGVCGKNIFQLLRNRRDDGT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggacataacgggacaaataattagtccctcggtccctccgttgcctcaaccttcc
tcccgtaacggctccggtagcggtaacgtcacaccggacaccggcggcagctgctggcag
acaacaccgaccaccgttacttcgggcccgaggctagttcggatagtgaagtccgactca
ggctacggcttcaatgttcgggggcaggttagtgaaggagggcagctgcggagcatcaac
ggggagctgtacgcacctctgcagcacgtcagtgcggtcctaccggggggcgccgccgac
agagccggcgtctccaagggggaccggatccttgaagtcaacggggtgaacgtcgagggg
gccacgcacaagcaggtggtggatctgatccgggcgggtgagaaggagctggttctggcc
gtgctgtccgtcccgccgcaggaggccgactgcctggatcccggcgacgacgggtcggcc
ctgtcctgctacgactactccgacaagcaggccgtccccatctccatccccagctacaaa
cacaccgagctcggcagtgagaagttcgtggtttacaacgtgtacatggcaggcaggcag
ctgtgctccaagcgttacagagagtttgtcgtcctgcaccagaacctgaagagagagttt
tccaattttaccttccccaagctgcccggaaagtggccgttttcactgtcggagcagcag
ctggacgcccggcgccgaggcctggaggaatacctggagaaagtgtgctcggtgcggata
gttggagaaagtgacatcatgcaggagttcttatctgattcggacgagaactataacggc
gtgtcagacgtggagttgagaatagccatgcccgataaaaccacgctcactgtcagagtc
tgcaaaaactccaccacggaccaggtttaccaggcggtggtcatgaaactaggaacagac
ggtgtaacggccagctgcttcgctctgtttgaggtcatcaaccacacatttgttcgtaaa
ctcgcccccaacgagttcccccacaaactgtacatccagaactatacctcagccatcccg
ggaacctgccttactctgcgcaagtggctctttaccacagaagaagagattctgctcaac
gacaaccagctcgccgtcagcttcttctttcaccaggcggttgatgatgcgaagaagaac
ttcatcaaagttgaggagaagtcttatcagctacagaagctggcagagcagaagaagatg
tctttgtacctgagcttgttgagaagttgcgagggctacaacgagatcctcttccctcac
tgctcctgcgactccaggcgtaaaggtcatgtgatcacagccatcagcatccacaacttc
aagctgcacgcctgcacagaggaaggcacacttgagaaccaggtgatcgcattcgactgg
ggggagatgcagcggtgggactcggacaaggagggcggggctttctgcttcgaatacgca
cgaggagagaaaaagccacgctgggtgaagattttcacaccttactttaactacatgcac
gagtgctttgagagagtcttctgtgagctgaggtggaggaaggaggtggaagaagaggcg
acagacgaggacaacaggaacggcagtaaagacggtgtgtgtggaaagaatattttccag
ctgctgaggaacagaagagatgacgggacatag
DBGET
integrated database retrieval system
