Nothobranchius furzeri (turquoise killifish): 107379716
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Entry
107379716 CDS
T05163
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107379716 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107379716 (cnot3)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107379716 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107379716 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
107379716
NCBI-ProteinID:
XP_015806090
UniProt:
A0A1A8AS35
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Position
sgr05:64151114..64164663
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AA seq
906 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPALVAT
SPSGQGNVEDDLYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQFQS
PVKNGTPSLQSSFSSSTTSGSSSSSSLISMASVVGGVPAVPMSSTLIGSFSSAVQQHQHQ
SAQQQQQPQQSNQSQQQPPQTKPSVPSNNTPSPPSNPLLPTSTAPSLTASSTPSSSAPHS
QTQPTPGPTSISSLGLGLDLRKGGLTGTSSANQMPSLGLTGHATPLNTMAGLISGSTSVL
YAHAAASGGLGLSSTTQSSILPESSTSTSTSGSSGVTTNGAASGLSLLGSSPAHNSLSGS
ILNLVPGQGVTPATSQVPPTSVSSTAGVAGRMAGNGGSVGVVGSVGGSAAPARPPSGLKQ
NGSTSYSAVVAESSTESALSTPSQSQNSQPSSLSSNSQPMDNGPSLISSITLPPSSPSPS
FSDSTPGGGSLLNGPHPYTQQSEPLEPPKGLSSLKAIAQRAALGSSHDGEIPNLHVTDRG
LNDIFSGSSAAPGTPTAPQPSSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQEAAWTHMPH
PSDSERIRQYLMRNPCPTLPYQHQVPPHHSDTIEFYQRLSTETLFFIFYYLEGTKAQYLS
AKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYL
EDRDLQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgaaatcgacagatgtttgaaaaaagtagctgag
ggcgtagaacaatttgaagatatttggcaaaagctccataatgctgccaatgcaaaccag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaactacagcgattgagagat
cagataaaaacatgggtggcctccaacgagatcaaagacaaaaggcagctagttgagaat
cgcaaacttatagagacgcaaatggaacggttcaaagtggtggaacgtgaaacaaaaaca
aaagcgtactctaaagaaggcttggggcttgctcagaaggtggatccagctcagagagaa
aaggaagagacgggccagtggctaacaaatacaatagacacactcaacatgcaggtggat
cagtttgagagtgaagtggaatctctttctgtccagacgcgaaagaagaagggcgacaaa
gagaaacaagatcgtattgacgagctcaagcggctgattgagaggcacagattccacatt
cgcatgttggagaccatcctacgaatgctggacaacgactctgtgccggtggatgccatt
caaaagatcaaggatgatgtggagtattacatcgattcctcccaagacccggactttgaa
gagaacgagtttctgtatgacgacttggacctggaagacatacccgcattagtcgcaact
tctccgtcaggtcagggaaatgtggaagacgacttgtatctccactctagcagcactccc
acctctaccacgtcgtcttcaccgatccctccatctccagccacttgcactgctgagaac
tcagaggacgataagaaaaggggacggtcgacggacagtgaagttagtcagtttcagtca
cccgtgaagaacggcaccccatcccttcagtcgtctttctcatcttccaccacctctggg
tcctcctcgtcctcttccctcatatccatggcgagcgtagtcggaggcgttcccgcggtt
cccatgagcagcactctcataggaagtttcagcagcgcagtacagcagcatcagcatcaa
tctgcacaacagcagcaacaacctcagcaatcaaaccaatcgcagcagcagccacctcag
actaaaccctctgttccttcaaacaacacccccagcccgcccagcaaccctctcctccca
acatccaccgccccatctctaaccgcatccagcacgcccagctcgtcagctccccactct
cagactcagcccacacctgggcctacctccatatctagtttgggtctggggctggattta
cgaaaaggtggcctcaccgggaccagcagtgccaaccaaatgccaagtttaggtttgact
ggccacgctactcctttaaacacaatggcaggcctcatttcagggtccacgtctgtcctt
tatgctcacgcagcggcatctggaggtttggggctgagcagcactactcagtccagtatt
ttacccgagagcagcacttccacgtccacctccggctccagcggagtcaccaccaacgga
gcggcgtcggggctttctttgctaggctccagcccagcccacaactctctgagtgggagt
attttgaatctggtcccaggacagggcgtgacccctgctacctctcaggtgccacccact
tctgtcagctctacagcaggagtagctggcaggatggccgggaatggaggaagcgtcggt
gtggtggggtcagtgggagggagtgctgctcccgctagaccaccgagtggactgaaacaa
aacggaagcacaagttacagcgccgtagtggcagagagctccacagaatcagctctgagc
acacccagccagtcacaaaacagccagccctcgtccctcagctcaaacagccagccgatg
gacaatggtcccagtttaatcagctccatcaccctgccccccagctctccctccccctcg
ttctcagacagtacacctggcggagggagtcttcttaacggcccccacccgtacacgcag
cagtccgagcccctcgagcctcccaaaggtctcagttctctgaaggcgatagctcagagg
gcagcgctcggatcgagtcacgatggagagattcccaacctccatgtgaccgacagaggc
ctaaacgatatcttctctggttcatcagcagcaccgggcacacccaccgcccctcagccc
tcgtcggaggtcagcatccctccatcactcggggtctgtccactgggcccaactcctctc
cccaaagaccagctctaccagcaggcgatgcaagaagctgcgtggacacacatgccacac
ccctccgactctgagcggatcaggcaatacctgatgaggaatccatgtcccacattgccc
taccagcatcaggtaccaccacaccactctgacaccatagagttctaccagaggctgtcc
acagaaactctgttctttatcttctactacctggagggcaccaaggctcagtatctgtct
gccaaggcgctgaagaaacaatcgtggaggtttcacaccaagtatatgatgtggtttcag
aggcacgaggagcccaagacgatcactgacgagtttgaacagggcacttacatttacttt
gactatgagaaatggggccagaggaagaaggaggggttcaccttcgagtacaggtacctc
gaagacagagacttgcagtga
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