Nothobranchius furzeri (turquoise killifish): 107379786
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Entry
107379786 CDS
T05163
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04517
IgSF CAM signaling
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107379786 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107379786 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107379786 (sptbn4)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107379786 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
107379786 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CH_2
DUF7854
MG280
Motif
Other DBs
NCBI-GeneID:
107379786
NCBI-ProteinID:
XP_015806186
LinkDB
All DBs
Position
sgr06:complement(1034843..1087154)
Genome browser
AA seq
1379 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPNSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFSALIHRHRPDLIEFHKLTRSNATHNLQQAFTVA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCVEAE
KIINRYEALASDLLDWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYAPNDGKLLSDINKAWECLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKMTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELATEIEKEGYYDVRRILARKENILGQWSLLKELVAGRRTRLERNLALQKTFQDMVYMI
DWMEETQVQLLSKDFGKHLLEVDDLLQKQSLQEADITVQSERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAAKRRAELEESRLLWAFFQELEESEAWIREKSSILA
AQGYGRDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKRGKQILSEKSFGTVGIQEHIMEV
KSQWKKLEDQAAQHLNHLQEALNFFQFSAETDDVVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTDAIDKHRLHVVALHKHLVALPLQYRDQEEVQVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPENLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLGSMQRLQNYLL
ECQEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAERL
ATAHSARTMDILLPFDDISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNNLEEAEKLINKHAALKEEIGRYEEDYERLQTMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPSTVE
TVEAAIKKHKEFTTTMELNLHRIKAVIEAGESLISQSNIYSERIRDRIDTLANRGNQNRE
QAQRWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKVSAAGGWDNADTSLWCGGLLGRCASECWCRWLCGDGSAFKTFCYQV
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctcccctgacctggacaatgcagaagcccagcgccagctcaacaacaac
aaccggccaaacagctccgggttctgggagacggagtgtactagctccaagctgtttgag
tgttctcgcatcaaggccctggcagatgagagagatgcagtgcagaagaaaacattcact
aagtgggtcaactctcacctggccagagtgtcctgtcgcatatcggacctctacaacgac
ctgagggacgggtacatgctcaccagactgctggaggtcctcagcggagagctgctgcca
cggcctacgagaggtcgcatgcggatccactgcctggaaaatgtggacaaagccttgcag
ttccttaaagagcagagggttcacctggagaacgttggttcccacgacattgtggacgga
aaccatcgccttacgctgggtctcatctggaccatcatcctacgctttcagatccaggtg
atcaaaataaacacagaagacaacagagagacgcgctctgctaaggatgctctgctgctc
tggtgccagatgaagaccgctggctaccctgaagtcaacatccagaacttcaccacctgc
tggagggatggcctcgccttcagtgccctcatacacagacacagacctgatctaatagag
ttccacaagctgacccggtccaatgcaacccacaaccttcagcaagcctttaccgttgca
gagcagcacctgggtctcaccaaactcttagaccccgaggatgtgaacacagagaaccca
gatgagaagtccatcatcacgtatgtggtctcctactaccactacttctccaagatgaag
gctctgattgtggaggggaagagagttggcaaggtgctggacaactgtgtggaagcagag
aagatcatcaaccgctacgaggctctggcctcggacctgctggactggatagagaagacc
atcgccatcatcagcaaccagaagtttgccaactcgctgacgggagttcagcagcagctg
caggccttcaccacctactgcactatagagaagcccatcaagtttcaggagaaggggaac
ctggaagtcctcctcttcaccatccaaagtaaactccgagccaataaccagaagccttac
gcgcctaacgacgggaagctcctctcagacatcaacaaggcttgggagtgtctggagaag
gcggagcatgagaggggcgtggctttgcgcaaggagctgattcgtcaggagaagctggag
ctgctggctcagcgctttgaccacaaaatgaccatgagacaagcgtggctcaacgagaac
cagagactggtgtcgcaggacaactttggctacgacctgccagcagttgaagcagcgatg
aagaagcatgaggccattgaggcggacatcgcctcgtacgaggagagaatcggcgtggtc
gtggagctcgccacagagattgagaaggaaggctactacgacgtccggcgaattttagca
cgtaaagagaacatcctgggtcagtggagcctgctgaaggagctggtggctggcaggagg
actcgcctggagaggaacctggctctgcagaagaccttccaggacatggtgtacatgatc
gactggatggaggaaacacaggtccagctgctgtccaaggactttgggaagcatcttctg
gaagtggatgaccttttgcagaagcagagtttgcaggaagcggatatcactgttcagtca
gagagagtggagacgctcaacactgctgcgctgaaatttaccacaatagaaggttaccaa
ccgtgtgacccacaggtgatctgtaaccgagtcaaccacgtctcctcctgcctggaggag
ctgaagcagctggcagctaagaggcgcgctgagctggaggagtccagactactctgggcc
ttttttcaggagctggaggagtcggaggcctggatccgggagaaaagctccatcctggct
gcccagggctacggcagagacctgagcagcgtgctgaggttgctccagaaacacaaaact
ctggctggagagctgctggctcaccgctcgctgctgcagaacaccatcaagagagggaag
cagatcctgagtgagaagagcttcggcacggtgggcatccaggagcacatcatggaggtg
aagagccagtggaagaagctggaggatcaggccgcgcagcatctcaaccacctgcaggag
gcgctcaacttcttccagttctccgctgagactgacgatgtggtggcctggctgcaggat
gcttaccgcctggtctccagcgaagacttcggtcacgatgagtactccactcagtcgctg
ctgaagaagcacaaaggcgtcaccgacgccatcgacaaacaccgcttacatgtggtggcg
ctgcacaaacacttggtggctctgcctctgcagtaccgcgatcaggaggaggtgcaggtg
aggatgggagaagtggagcagctgtatacggaggtcgcagaggtcgcggtgctcaggcag
cagtggcttcacgacgcgctggccgtctaccggatgttcagcgaggtcaatgcctgcgag
ctctggattgatgagaaggagcagtggctggataagatggagatcccggaaaacctggag
gatgtggaggtggtggcgcacaggtttgagagtctggaccaggagatgaacagcctgatg
gggcgaatcttggatgtgaatcagatcgttcagcagctcctggatggaggacacccatct
tccaccgaggtcagaggttgtcaggatcacctcaactccaggtggaacagcatcgtggag
ctggtggagcagaagaaagaccagctgggctccatgcagcgcctgcagaattacctcctg
gagtgtcaagagatcaagtcccagatccaggagaagagaaaagccatcgacgccacccag
tatgtgggcagcgatctggggggcgtcctggctctgcagaggcgcctctccaccatggag
ggagcgctgtcggtgctggagcccaaactgctgcacctacaggaggaggcggaacgtctg
gccactgctcactcagctcgtaccatggacattctgctgccctttgatgacatcagcgtg
gagtgggaggagcttaaacggaccctgcagggatgtgaggactcactgatggtagccagc
aggctgcagagtttcatacaggacctggactcgttcctcacctggttggtccagactcag
acggccgccgcctcggaccagctgcccaacaacctggaggaggcagagaagctcatcaac
aaacacgccgctctgaaggaggagatcggacggtatgaggaggactacgagcgtctgcag
accatgaacgagctgctggagtccgaggacgctccccttccgcaggccgccctgcagcaa
tggcttcagaagctcgacgtcggctggaataagctgctggagatgtgggagagccggaga
gaagttctggtccaggcccacatattccacctgttcctgcgagatgtcaaacaggccgag
tcgttcctcaacaaccaggagtcggccctggctcacgtggagctgccctccacggtggaa
acagtcgaagctgcgataaagaaacacaaagagttcaccaccaccatggagctgaacctg
caccggatcaaagccgtgatcgaagcaggagaaagtctgatcagtcagagcaacatctac
tcagagcgcatcagggaccgcatcgacacacttgccaacaggggaaaccagaacagggag
caggctcagcgctggctggaaaaactcaacgaccagtgggaactccagaggttcctccaa
gactgtcatgagctgggggactgggtgtacgagaagatgctaatggcgagggacagcagt
cgagacgagacccagaagcttcataagaaatggcagaagcaccaggcttttatggcggag
ttggcccaaaacaaggaatggctggataaaatcgaaaaggtgagtgctgccggtggttgg
gataatgcagacacatctctgtggtgtggaggcttactgggtcgctgtgcttctgagtgc
tggtgccgttggctctgtggagacgggagtgcttttaaaacattctgttatcaagtttga
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