Nothobranchius furzeri (turquoise killifish): 107379873
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Entry
107379873 CDS
T05163
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107379873
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
107379873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
EGF_3
hEGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
107379873
NCBI-ProteinID:
XP_015806315
LinkDB
All DBs
Position
sgr06:complement(4457833..4490139)
Genome browser
AA seq
1685 aa
AA seq
DB search
MFGAEPRAAHCFQLSPYLALPLSLSLAHTQESSVKTDRVGEGRGGDVLFFFLPPFFPPVL
VFTRPQSKKRRSGGESAWRRLGVPAEEPQTQTLKMLGRLLILFIFLASPQPADGQTGGRD
GGKGGTERFQVMFTPTICKVLCSQDRCVNHCERGNVTTLYSSGEAGGRGDGTRGPGFRVF
LCPLLCKNGGICLQKDRCFCPSNFTGKFCQIPVSPSVSSSAVSSPSSTNEVVKPAAPSST
AANQDLMQSEFLLPLGQNQEAPRSAAAPGSAMVKVRVQHPPEASVKIHQVVKVPGSSYSP
QMFSSSSSGSAGAPAPVLTSAGRIQAQTLRGAGTYNQQSGFKYCFREVRDGQCSSPLPGL
RSREVCCKGMGKAWGITECVLCPEFSGQSNSSCPVGFVRSNGTQCVDVNECLQPGLCENG
LCVNTRGSYSCVCRLGFILDATHGICISQSVISEEKSQCYRVLGSGRGPASCSLPIPRNI
TKQICCCSRVGKAWGPDCERCPYFGSVAFKEICPAGPGYQYSASTLQFSQRVGTELTDRK
PSAPDTRGTSSEPRSSGGAASSSQQNPTSSGTRTSPPQQPPQPRPGPAAGSSSVRTLQPS
SATTSQSRAGANQNRPNSTQSRLPPPSTEDRAGSRSSGSWSNLPPAQGDTLPVPAQPQSP
GRGFRTDGQLDPPQNRPAVRPTRPTRVQRVCESRPGLCGRGLCVDQPGGKHTCECDQGHQ
PNAQRTRCHDVNECVQTPGVCSGGECVNSAGSFWCVCSSGFRSNNEQTSCKDIDECQQNP
CSDGRCENTPGSYRCVCHHGYRLTGNTCSDVDECVDPLLCPGQECINTPGSYRCSSCQPG
FGLLNGLCTDIDECRQAPCPYGHCENTPGSYRCVCRHGYKMQNNTCTDMDECAEPSQCPG
QMCVNSVGSYRCVSCRPGYALTNRQCTDVDECARVGSCEEDRVCVNTIGSFRCDCPSGYR
SSSLGRQCTDVNECLEGDFCFSRGECVNTPGSYMCVCSPGFTLSDNRTACLDVDECVKPG
VCSDGRCINTEGSFLCECGAGFTTNPENTACLDLDECVKSGGSVCGSQRCENTIGSYRCL
TSCEAGYQVAPDGSCADEDECVSKPDVCGPARCQNLRGSFECECDGAEEEFDSSSKQCVR
PVKPGAGSSPSARHSSSSSDSSSSSSASTSFQASLVDVAPVLTQLPASRPGELRECYYNV
ADWGTCSVLATNTTQQECCCTMGEGWGLSCQYNSCPPVDTAEFLSLCPSGRGYITSGPGA
FSYRDVDECKRFHPEVCKNGVCVNNIPGYSCYCSSGYVYNSTLLECVDHDECEEESCVGG
VCVNTLGSYYCSCPPPLVLDDTQRICVNASHLTVDENLSVCWQHVTADLLCQSPLLGAQV
TFVDCCCLYGEGWGMGCALCPPTDSEDYASLCSSLSPPRFSERFPDPAGSEPGAGRGGPP
YGTDLFSPSRDFSRSDYDDYAQAGGSRSSFGGRAQTSLGLPEDTYRGSEYSTSYFAEGDY
GSPDGSPPRTPSFRLPPDPRSEIGFGARPLPPSQPDLPSLNLAPLPGSPYMEEEEEEEEA
RAWRPGPAFPPFSDRSRGGGAQRRVYERRYEPYAGLNAAEDCGILHGCENGRCIRVAEGY
TCDCYHGYELDMTSMTCVDINECEDGFSVAFPCVNARCVNTEGSFRCVCRRGYVMSRRLN
HCIAA
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagccgagcccagagctgcacactgcttccaattatctccgtacctcgctcta
cctctctccctctctctggctcacactcaggagagttcagtgaaaactgaccgggtaggg
gaggggagaggaggggatgtccttttcttcttcctcccccctttttttcctccagtgctt
gttttcactcgaccacaaagcaagaaaaggagatcaggaggggagtcggcgtggagacgt
ttgggagttcctgcagaagaaccacaaacacagactctcaagatgctcgggcgtttgctg
atcctcttcatcttcctcgcttctcctcagccagctgatggacagacaggggggagggac
ggagggaaaggaggaacggagagatttcaggtgatgttcacgccgacaatttgcaaggtg
ctctgcagccaggaccgatgtgtcaaccactgcgagcgaggcaacgtgaccacgctgtac
agcagcggtgaagcaggaggaagaggagacggcacccgcggcccaggattcagagtcttc
ctctgtcccctgctctgtaagaacggaggcatctgtctccagaaggatcgttgtttctgc
ccctcaaacttcaccggaaaattctgccagattcccgtttctccttccgtctcctcctcc
gccgtgtcctcgccctcctccaccaatgaggtggtcaaacccgcggccccatccagcacg
gcagccaatcaggatctgatgcagtcggagttcctgctgccactgggccagaaccaggag
gcgccacgctccgcagcagcacccggttctgccatggtgaaggtccgagtccagcacccc
cctgaggccagtgtgaagatccatcaggtggtgaaggttcctggatccagttactctccg
cagatgttctcctcctcctcttcgggttctgctggcgctccagccccggttctgacgagc
gctggtaggatccaggcccagacgctgagaggtgccggtacctacaaccaacagtctggt
tttaaatactgcttcagagaagttagagatggacagtgcagttctccacttcctggtttg
aggagcagagaggtgtgctgcaaagggatggggaaggcctggggcatcacggagtgtgtc
ctctgtcctgaattctcaggtcaaagcaacagcagctgtcctgttgggtttgtgcgatcc
aatggaacacagtgtgttgatgtgaatgagtgcctccagccggggctctgtgagaacggc
ctctgtgtgaacaccagggggagctatagctgcgtgtgtcggttggggttcatcctcgat
gccacacatggaatttgcatctcccaaagcgtgatatcagaggagaagagtcagtgttac
cgggtccttggttctggtcggggtcccgcttcgtgctcactgcccattcctcggaacatc
accaagcagatctgctgctgcagtcgggtcgggaaggcctggggacccgactgcgagagg
tgtccgtactttggttctgttgcctttaaggagatctgtccagccgggcccggttatcaa
tactcagcttcgactctgcagttcagccagagagttggtaccgagctcacggacaggaag
ccatcagcaccggataccagaggtaccagttctgaacccaggtccagtggtggcgccgct
tccagttctcagcagaatccaacatcttctggtaccagaaccagtccacctcagcagcct
ccacagcccaggcccggcccagctgctggatcttcttctgtcagaactcttcaaccttcc
agtgctacgacctcacagagcagagcaggagccaatcagaaccgacccaattcaacacaa
tcacgactcccacctccttccacggaggatcgagctggaagtcgatcctcagggtcctgg
tccaatctgccaccagctcaaggggacactctcccagtcccagcccagccacagagtccc
gggcgtggattcagaaccgacggacagctggatccaccacagaaccgcccagcagtgaga
ccaacccggcccaccagagtccagagagtgtgtgagagtagaccaggtttatgtgggcgt
ggcctctgtgtggatcagccaggtgggaagcacacctgtgagtgtgatcagggacatcag
cccaacgctcagaggacacgctgtcacgatgtgaacgagtgtgtgcagaccccaggtgtg
tgttcaggtggagagtgtgtgaacagcgctggaagcttctggtgtgtttgttcttctgga
ttcagaagcaacaacgaacagaccagctgtaaagatatcgacgagtgtcagcagaacccc
tgcagtgacggccgctgtgaaaacacacctggcagctacagatgcgtctgtcaccatggt
tacaggctcactggcaacacgtgctcagatgtggatgagtgtgtggatcctctgctgtgt
ccgggtcaggagtgtatcaacactccaggttcttaccgctgctcttcctgccagcccgga
tttggacttcttaacgggctctgcacagacatcgacgagtgtcgtcaggctccgtgcccc
tatggtcactgtgaaaacacacctgggagctaccgctgcgtctgtcgccatggttacaaa
atgcagaacaacacctgcacagatatggatgagtgtgcagagccttctcagtgtcctgga
cagatgtgtgtgaactctgtgggctcctacaggtgtgtgtcgtgtcgtcctggatacgca
cttaccaacagacagtgcacagatgtggacgagtgtgcgagagtcggatcgtgtgaagag
gaccgggtttgtgtgaacacgatcggctcgttcaggtgtgactgtccgtctggatacaga
agctccagcctagggcgtcagtgcacagacgtaaacgagtgcttggagggggacttctgt
ttctccagaggagaatgtgtgaacacacctggatcatacatgtgtgtgtgttcccctgga
ttcactctgagtgacaacaggacagcctgcctcgatgtggatgagtgtgtgaagccaggt
gtgtgttcagatggtcgctgtataaacactgaaggctcattcctgtgtgaatgtggagcc
ggcttcaccaccaacccagagaatactgcctgcctcgatcttgacgagtgtgtgaaatct
ggtggttccgtttgtgggtcacagcgatgtgagaatacgattggctcgtaccgctgcctt
acttcctgtgaagcgggctatcaggtggcgcctgacggcagctgtgcagacgaggacgag
tgcgtgtctaagccagacgtgtgcggcccggcccgctgccagaatctgagaggaagcttt
gaatgtgaatgcgacggagcagaagaagagtttgactccagcagcaaacagtgtgtccga
cccgtaaagcccggagcaggatcatctcccagcgcccgccactccagttcctcgtctgat
tcctcctcatcctcctccgcctccacctccttccaggccagcctggtggatgttgctccg
gttctgacccagctccctgcgtcccgtcctggggagctcagggagtgttactacaacgtg
gcggactggggaacctgcagcgtgttggccaccaacaccactcagcaggaatgctgctgc
accatgggggagggctggggactgagctgtcagtacaactcttgtccacctgtggacaca
gcggagtttctgtctctgtgtcccagcgggagaggctacattacctcaggaccgggagcc
ttcagttacagagatgtggatgagtgtaagcgtttccatccagaagtgtgtaagaacggg
gtgtgtgttaacaacattccaggatacagctgttactgctccagtggatatgtttacaac
agcacgctgctggagtgtgttgatcacgatgagtgtgaagaggagagctgtgtaggaggt
gtctgtgtgaacacactcggttcgtactactgcagctgtcctcctcctctggtgctcgat
gacactcagaggatctgtgtcaacgcctcccatctcactgtggatgagaacctgtctgtg
tgctggcagcacgttaccgccgacctgctgtgtcagagtcctcttctcggcgctcaggtc
accttcgtggactgttgctgtttatacggcgagggctgggggatgggctgcgccctttgc
ccccccactgactcagaggactacgcctccttgtgcagctcgctttctcctcctcgtttc
tccgagaggtttcctgacccagctggatcagaaccaggagcgggacgaggagggcctccg
tacgggacggatctcttctctcccagcagagatttcagtcgttctgactatgatgactac
gctcaggcaggaggcagcaggtccagcttcggggggagggcccagacctccttgggtctg
ccggaggacacctatcggggctctgagtacagcaccagttactttgctgaaggagactat
ggctcccccgacgggtctccacccaggaccccatcctttcgcctccctcccgaccctcga
tctgagatcgggtttggggctcgacctcttcctccatcccagcccgacctcccttctctg
aacctggctccactgccgggatctccctacatggaggaggaggaagaggaggaggaggcc
agggcgtggaggccaggcccggcgtttcctcccttcagtgacaggagcagaggaggagga
gcacaacggcgggtgtacgagaggcgctacgagccctacgccggcctgaatgcagcggag
gattgtgggattctgcacggctgtgagaacggcaggtgtattcgcgttgctgaaggttac
acctgtgactgttaccatggatacgagctggacatgacctccatgacctgtgttgatata
aacgagtgtgaggacggcttcagcgtggcctttccgtgtgtgaacgctcgctgcgtcaac
acggaaggatccttccgctgtgtctgcaggagaggctacgtcatgtcccgcagactgaac
cactgcattgctgcttag
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