Nothobranchius furzeri (turquoise killifish): 107379957
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Entry
107379957 CDS
T05163
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107379957
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107379957
09142 Cell motility
04820 Cytoskeleton in muscle cells
107379957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107379957
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107379957
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107379957
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107379957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107379957
NCBI-ProteinID:
XP_015806409
UniProt:
A0A9D2YD91
LinkDB
All DBs
Position
sgr06:4864145..4880811
Genome browser
AA seq
1019 aa
AA seq
DB search
MGLFGNPGPDGVTGPPGLQGFQGLKGEKGLKGSSLQGFPGAVGLKGEKGSNGDPGFPSFG
IKGREGPGGPQGRVGPKGNRGVGLTGSLGQPGSHGEDGSVGPQGLPGPPGPRGIQGPKGQ
DGLPGPKGHPGLDGGPGPTGLTGLCVPGPIGTRGVQGPRGPTGFIGIRGPKGMKGDPGFQ
GKGEAGPQGATGIQGVNGAPGPVGGVGPKGLGGTNGEPGSPGIRGSRGIPGKPGSPGIDG
IKGEYGQPGPKGQRGVDGAKGPQGPPGYQGDKGESGPKGTQTSVTVLGESGDPGNPGVRG
LTGAKGERGLPGPQGLDGRRGRSGPSGPQGLPGDPGRDGRKGLPGFTGPPGDQGFTGWPG
YKGEKGSDGPCGEPGLDGEPGLNGPKGVKGEPSLPGPGAKGPSGEKGNPGCPGLPGPKGL
AGLRGNFGPPGDGGPCGPQGPPGPPGCRGSPGSPGEKGVDGSPGKTGLPGPPGSPGQCCC
VIVYYSTDGLQKISDGGRIQFNQIGLLSSFSPICPSSGCGVGPRGPDGDVGQPGCTGEKG
PPGPCGPPGACGPAGDPGFPGPPGLPGPPGYPGPDGICINGVKGDKGNAGAQGPKGPPGC
QGSPGPPGPGFKGDKGSNGEPGSLGAAGPPGDIGPKGLPGANGPSGPPGPKGIRGDMGTR
GPVGLKGEKGAPGSIGLKGGQGPPGRQGERGRNSIQGIEMSSGDEGEEGEQGQKGARGPP
GRTGNIGAYGLKGNIGVKGQAGKQGGPGLKGDKGDEGPIGPKGGVGEWGDKGTKGACGPP
GILPGLPPNNGFLFTRHSQNSTAPKCPDGSSLIYTGYSLLFINGYSRAHGQDLGSSGSCL
QRFSTLPFVICEPAGECKYAERNDYSYWLSNINELLPENPIVSNEELLESKISRCSVCEA
KANVIALHSQTSAVPPCPSNWNSLWVGFSFVMETGLGAEGSGQPLASPGSCLESFHKMPF
IECNGSPGTCRKDSGTYSYWLAALNQQNMFRKPRPWRNRGNSPDGKISRCRVCMKQKLR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgggattatttgggaaccccggacctgatggtgtcacgggacctccaggccttcaagga
tttcagggtctaaaaggagaaaaaggacttaagggatcatctctccaggggtttccagga
gctgtggggttaaaaggagagaagggctctaatggagatccaggttttcccagttttggc
atcaagggacgagaggggccagggggcccccaaggtagagttggcccaaaggggaacagg
ggtgttggtttgactggcagcttgggtcagccaggttctcatggagaagatggatcagtg
ggaccacaaggacttcctggacctccaggaccaaggggaattcaaggacctaaaggacaa
gatggcctcccaggacccaaaggtcatcctggtctggatggaggaccaggtcctactggg
ctgacagggctctgtgtccctggacctatcgggactcgaggagtgcaaggaccaagaggc
ccaacgggattcatagggatcaggggcccaaagggtatgaagggagatcctgggttccag
ggcaagggagaagctgggcctcagggagcaacaggaattcaaggagttaacggagctcct
ggaccagttggaggagtgggaccgaaaggcctaggaggcaccaatggagagcccgggagc
ccagggatcagaggaagcaggggcatccctggaaaacctggaagtccaggaattgatgga
ataaagggagaatacggacaaccaggaccaaaaggtcagaggggtgtagatggggctaag
ggcccccaggggcctccagggtatcagggagacaaaggagagtctggaccaaaaggaacc
cagacaagcgtcacagtgttaggagaatctggagacccaggaaacccgggggtcagaggt
ttgaccggggctaaaggagaaagaggcctcccaggacctcagggcctggatggtagaaga
gggagatctggaccctcaggaccacaaggacttccaggagacccaggtagagatggacgg
aaaggtcttcctggtttcactggacctcctggtgatcaaggattcactggatggccaggt
tataaaggtgaaaaaggttcagatgggccttgtggggaaccgggtttggatggagagcca
ggattaaatggaccaaaaggtgttaaaggagaaccgagcctacctggaccaggggccaaa
ggtccctcaggagagaaggggaatccaggatgtccaggactcccaggtcccaaaggacta
gcaggactacgtggaaactttggtcctccaggagacggtggcccatgtggaccacaagga
cctccgggaccccctggatgcagaggttctcctgggagtccaggtgagaagggcgttgac
ggttctccagggaaaactggcctcccaggcccccccggctccccaggtcagtgttgctgt
gttattgtgtactactctactgatggactccagaagatctctgatggtggacgaatccag
tttaatcagattggtttgctctcttctttctcacctatttgtccatcctcagggtgtgga
gttgggcccaggggaccagatggagacgtgggtcaaccaggctgtacaggggagaagggc
cctcctggtccatgtgggcctccaggtgcttgtggaccagcaggagacccaggtttccct
ggtcctccaggactccctggacctcctggatatcctggacccgatggaatctgtatcaat
ggagtaaaaggagacaaaggaaatgctggagcacaaggacctaaaggcccacctggctgt
caggggtctcctgggcctccaggtcctggttttaaaggggataaaggatctaacggagaa
cctggttccctgggagcagctggtcctcctggagacatcggcccaaaaggccttccgggg
gccaatggaccatcaggccctcctggaccaaaaggtatcagaggagatatgggtaccaga
ggacctgttggtttgaaaggggaaaaaggagcaccaggtagcataggcctaaaaggaggt
caaggacctcctgggagacaaggagaaagagggaggaactcaattcaaggaatagaaatg
tcatctggagatgagggggaagaaggagaacagggtcaaaagggagcaaggggtcccccg
gggagaacaggaaatattggagcttacggtttaaagggcaacattggggtgaaaggtcaa
gcagggaaacaaggaggtcctggactgaaaggagacaaaggagatgaaggaccaattgga
ccaaaaggtggtgtaggtgaatggggggacaaaggaaccaaaggtgcctgtggtcctcct
ggcattcttcctggtctaccaccaaacaacggttttctgttcaccagacacagtcagaac
agcacagctccaaaatgtcctgatggatcctctcttatctataccggatactcgctgctc
ttcatcaacggctacagtcgagctcacggacaagacctgggttcttcaggtagctgtctc
caaaggttcagcacactgcccttcgtgatctgtgaacctgctggagaatgtaaatatgcc
gaacgcaacgactactcgtactggctgtccaacatcaacgaactcctgccagaaaatccg
atagtgagcaacgaagagctgctagagtccaaaatcagccggtgttctgtgtgtgaggcc
aaagccaatgtcatcgctcttcacagtcagactagtgcagtccccccttgtccctctaac
tggaactctctctgggtgggattctccttcgtgatggaaactggtcttggggcagagggt
tctggtcaacctctggcctcacccggatcctgtctggaaagctttcacaaaatgcccttc
atcgaatgtaacggaagtccgggaacctgcaggaaggacagtggcacctacagctattgg
ctagcagctttaaaccaacaaaacatgttcagaaaaccgaggccttggaggaaccgtgga
aactctccagatgggaaaatcagtcgctgtcgagtgtgcatgaagcagaaattaagatga
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