KEGG   Nothobranchius furzeri (turquoise killifish): 107379957
Entry
107379957         CDS       T05163                                 
Name
(RefSeq) collagen alpha-1(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04382  Cornified envelope formation
nfu04510  Focal adhesion
nfu04512  ECM-receptor interaction
nfu04518  Integrin signaling
nfu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107379957
   04518 Integrin signaling
    107379957
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107379957
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107379957
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    107379957
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nfu04147]
    107379957
   00536 Glycosaminoglycan binding proteins [BR:nfu00536]
    107379957
Exosome [BR:nfu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107379957
Glycosaminoglycan binding proteins [BR:nfu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107379957
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107379957
NCBI-ProteinID: XP_015806409
LinkDB
Position
sgr06:4864145..4880811
AA seq 1019 aa
MGLFGNPGPDGVTGPPGLQGFQGLKGEKGLKGSSLQGFPGAVGLKGEKGSNGDPGFPSFG
IKGREGPGGPQGRVGPKGNRGVGLTGSLGQPGSHGEDGSVGPQGLPGPPGPRGIQGPKGQ
DGLPGPKGHPGLDGGPGPTGLTGLCVPGPIGTRGVQGPRGPTGFIGIRGPKGMKGDPGFQ
GKGEAGPQGATGIQGVNGAPGPVGGVGPKGLGGTNGEPGSPGIRGSRGIPGKPGSPGIDG
IKGEYGQPGPKGQRGVDGAKGPQGPPGYQGDKGESGPKGTQTSVTVLGESGDPGNPGVRG
LTGAKGERGLPGPQGLDGRRGRSGPSGPQGLPGDPGRDGRKGLPGFTGPPGDQGFTGWPG
YKGEKGSDGPCGEPGLDGEPGLNGPKGVKGEPSLPGPGAKGPSGEKGNPGCPGLPGPKGL
AGLRGNFGPPGDGGPCGPQGPPGPPGCRGSPGSPGEKGVDGSPGKTGLPGPPGSPGQCCC
VIVYYSTDGLQKISDGGRIQFNQIGLLSSFSPICPSSGCGVGPRGPDGDVGQPGCTGEKG
PPGPCGPPGACGPAGDPGFPGPPGLPGPPGYPGPDGICINGVKGDKGNAGAQGPKGPPGC
QGSPGPPGPGFKGDKGSNGEPGSLGAAGPPGDIGPKGLPGANGPSGPPGPKGIRGDMGTR
GPVGLKGEKGAPGSIGLKGGQGPPGRQGERGRNSIQGIEMSSGDEGEEGEQGQKGARGPP
GRTGNIGAYGLKGNIGVKGQAGKQGGPGLKGDKGDEGPIGPKGGVGEWGDKGTKGACGPP
GILPGLPPNNGFLFTRHSQNSTAPKCPDGSSLIYTGYSLLFINGYSRAHGQDLGSSGSCL
QRFSTLPFVICEPAGECKYAERNDYSYWLSNINELLPENPIVSNEELLESKISRCSVCEA
KANVIALHSQTSAVPPCPSNWNSLWVGFSFVMETGLGAEGSGQPLASPGSCLESFHKMPF
IECNGSPGTCRKDSGTYSYWLAALNQQNMFRKPRPWRNRGNSPDGKISRCRVCMKQKLR
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgggattatttgggaaccccggacctgatggtgtcacgggacctccaggccttcaagga
tttcagggtctaaaaggagaaaaaggacttaagggatcatctctccaggggtttccagga
gctgtggggttaaaaggagagaagggctctaatggagatccaggttttcccagttttggc
atcaagggacgagaggggccagggggcccccaaggtagagttggcccaaaggggaacagg
ggtgttggtttgactggcagcttgggtcagccaggttctcatggagaagatggatcagtg
ggaccacaaggacttcctggacctccaggaccaaggggaattcaaggacctaaaggacaa
gatggcctcccaggacccaaaggtcatcctggtctggatggaggaccaggtcctactggg
ctgacagggctctgtgtccctggacctatcgggactcgaggagtgcaaggaccaagaggc
ccaacgggattcatagggatcaggggcccaaagggtatgaagggagatcctgggttccag
ggcaagggagaagctgggcctcagggagcaacaggaattcaaggagttaacggagctcct
ggaccagttggaggagtgggaccgaaaggcctaggaggcaccaatggagagcccgggagc
ccagggatcagaggaagcaggggcatccctggaaaacctggaagtccaggaattgatgga
ataaagggagaatacggacaaccaggaccaaaaggtcagaggggtgtagatggggctaag
ggcccccaggggcctccagggtatcagggagacaaaggagagtctggaccaaaaggaacc
cagacaagcgtcacagtgttaggagaatctggagacccaggaaacccgggggtcagaggt
ttgaccggggctaaaggagaaagaggcctcccaggacctcagggcctggatggtagaaga
gggagatctggaccctcaggaccacaaggacttccaggagacccaggtagagatggacgg
aaaggtcttcctggtttcactggacctcctggtgatcaaggattcactggatggccaggt
tataaaggtgaaaaaggttcagatgggccttgtggggaaccgggtttggatggagagcca
ggattaaatggaccaaaaggtgttaaaggagaaccgagcctacctggaccaggggccaaa
ggtccctcaggagagaaggggaatccaggatgtccaggactcccaggtcccaaaggacta
gcaggactacgtggaaactttggtcctccaggagacggtggcccatgtggaccacaagga
cctccgggaccccctggatgcagaggttctcctgggagtccaggtgagaagggcgttgac
ggttctccagggaaaactggcctcccaggcccccccggctccccaggtcagtgttgctgt
gttattgtgtactactctactgatggactccagaagatctctgatggtggacgaatccag
tttaatcagattggtttgctctcttctttctcacctatttgtccatcctcagggtgtgga
gttgggcccaggggaccagatggagacgtgggtcaaccaggctgtacaggggagaagggc
cctcctggtccatgtgggcctccaggtgcttgtggaccagcaggagacccaggtttccct
ggtcctccaggactccctggacctcctggatatcctggacccgatggaatctgtatcaat
ggagtaaaaggagacaaaggaaatgctggagcacaaggacctaaaggcccacctggctgt
caggggtctcctgggcctccaggtcctggttttaaaggggataaaggatctaacggagaa
cctggttccctgggagcagctggtcctcctggagacatcggcccaaaaggccttccgggg
gccaatggaccatcaggccctcctggaccaaaaggtatcagaggagatatgggtaccaga
ggacctgttggtttgaaaggggaaaaaggagcaccaggtagcataggcctaaaaggaggt
caaggacctcctgggagacaaggagaaagagggaggaactcaattcaaggaatagaaatg
tcatctggagatgagggggaagaaggagaacagggtcaaaagggagcaaggggtcccccg
gggagaacaggaaatattggagcttacggtttaaagggcaacattggggtgaaaggtcaa
gcagggaaacaaggaggtcctggactgaaaggagacaaaggagatgaaggaccaattgga
ccaaaaggtggtgtaggtgaatggggggacaaaggaaccaaaggtgcctgtggtcctcct
ggcattcttcctggtctaccaccaaacaacggttttctgttcaccagacacagtcagaac
agcacagctccaaaatgtcctgatggatcctctcttatctataccggatactcgctgctc
ttcatcaacggctacagtcgagctcacggacaagacctgggttcttcaggtagctgtctc
caaaggttcagcacactgcccttcgtgatctgtgaacctgctggagaatgtaaatatgcc
gaacgcaacgactactcgtactggctgtccaacatcaacgaactcctgccagaaaatccg
atagtgagcaacgaagagctgctagagtccaaaatcagccggtgttctgtgtgtgaggcc
aaagccaatgtcatcgctcttcacagtcagactagtgcagtccccccttgtccctctaac
tggaactctctctgggtgggattctccttcgtgatggaaactggtcttggggcagagggt
tctggtcaacctctggcctcacccggatcctgtctggaaagctttcacaaaatgcccttc
atcgaatgtaacggaagtccgggaacctgcaggaaggacagtggcacctacagctattgg
ctagcagctttaaaccaacaaaacatgttcagaaaaccgaggccttggaggaaccgtgga
aactctccagatgggaaaatcagtcgctgtcgagtgtgcatgaagcagaaattaagatga

DBGET integrated database retrieval system