Nothobranchius furzeri (turquoise killifish): 107379980
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Entry
107379980 CDS
T05163
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107379980 (hnf1b)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107379980 (hnf1b)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
107379980
NCBI-ProteinID:
XP_015806426
UniProt:
A0A1A7ZZT3
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Position
sgr06:5992377..6016098
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AA seq
571 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGLTRDVLIQALDDMDPSPPGFGVKLESLPMSPAAPPP
PPSQDADSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRAEV
ERMLAEDPWRAARMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAALYT
WYVRKQREILRQFNQAAHGSSGSMSDKSSHDPAFFYPEYNASGAVMGPVSDEVGNEPLCK
KMRRNRFKWGPASQQILYQAYERQKNPSKEERETLVEECNRAECLQRGVSPSKAQGLGSN
LVTEVRVYNWFANRRKEEAFRQKLAMDAITAPPHGLNPLLSHSSPHHPQNSASPPMRYSQ
GPGEVSSSSAISHHSSNAMATSQSVLQQVSPGGLDHSHSLLSPDAKMISGSGGGLPPVST
LTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVASSLAALQPVPFSQQ
LHSPHQSSLMQQSPSHMSQQPFMATVTHSHMYSHKQEPPQYSHPSRFPPAMVVTDANSIS
TLSSMSSSKTDAPVNKMMQLGSLSWCPLQAW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaagatggtttccaagctgacctccctgcagcaggagctccttagcgccctg
ctggactcgggactcaccagagatgttctgatccaggccctggacgacatggaccccagc
ccgccgggctttggagtcaagctggagagcctgcccatgtctcccgctgcacctcctccg
cctccttcccaggacgcagactccaagcccgtcttccacacgctcaccaacggccacagc
aagggcaagctgtccggggacgagggctcggaggacggggacgactacgacaccccgccg
atcctcaaggagcttcagtcgctcaacacggaggaggccgcggagcagcgcgccgaggtg
gagcgcatgttggcagaggacccgtggcgagctgcccgcatgatcaaaggttacatgcag
cagcacaacattccccagcgggaggtggtggacatcacaggcctgaaccagtcccacctc
tcccagcacctcaacaaaggcacgcccatgaaaacccagaagcgagcggcgctctacacc
tggtacgtcaggaagcagcgggaaattcttcgacagttcaaccaggcggctcacggttcc
tccggcagcatgtctgacaaaagtagtcacgacccagcctttttttacccagaatacaat
gcgtcaggtgcggttatgggtccggtcagcgacgaggtgggcaacgaacccctctgcaag
aaaatgagacgtaaccgcttcaaatgggggcctgcgtcccagcagatcctctaccaggcc
tacgaacggcagaagaatcccagtaaggaggagcgggagacgctggtggaggagtgcaac
agggccgagtgtctccagaggggcgtctccccctccaaagcccagggcctcggctctaac
ctggtcaccgaggtcagggtctacaactggttcgccaaccggcgcaaagaggaagccttc
aggcagaagttggccatggacgccattacggctccgccccacggcctcaacccactgctg
tcacacagctcgccgcatcacccccaaaacagcgcttcccccccaatgcgttacagccaa
ggtcccggcgaggtcagctcctccagtgccatcagtcaccacagcagcaacgccatggca
accagccagtccgtgctccagcaggtgtctccaggaggcctggaccacagccacagtctg
ctgtcgcccgacgcaaagatgatttcaggttcaggtggaggacttcctccagtcagcacg
ctgaccaacatccacagttcccatcacagccaccagcagacacagaacctcatcatgcct
ctttctggagtcatggccatagcacagagtttgaacacgtcgcagtcccagacggtgccg
gtgatcaacagcgtagcgagcagcctggcggcgctgcagccggtgccgttttcccagcag
ctccacagcccccaccagtccagcctgatgcagcagtcacccagccacatgagccagcag
ccgttcatggccacggtcacacactcacacatgtattctcacaagcaagagcctccacaa
tattcccacccgtcacgtttccctcctgccatggtggtcacggacgccaacagcatcagc
actctgagctccatgtcctccagcaagacggacgctcctgtaaacaagatgatgcaactt
gggagtctctcctggtgtcctcttcaggcttggtga
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