Nothobranchius furzeri (turquoise killifish): 107380014
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Entry
107380014 CDS
T05163
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04517
IgSF CAM signaling
nfu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107380014 (rapgef2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107380014 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107380014 (rapgef2)
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Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107380014
NCBI-ProteinID:
XP_015806495
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All DBs
Position
sgr01:48604551..48745267
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AA seq
1624 aa
AA seq
DB search
MASYVDNRFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYTTGKPPIARGYHTECNKP
QLPADFSRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTHPDSRTEILCMGNSF
GVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEKEKMCGHLRLLNIACAA
KAKPRLVTLTKPSRDSPLAFSLLGGQEKGFSVFIDAVEPGSKAAEAGLKRGDQILEVNGQ
NFENVQFSKANEILKNNTHLSITVKTNLLVFKELLTRPEHDHDLDVDEELDRKNGAPHLP
KIGDIKKASRYSIPDLAVDVEQVIGLEKASKKAKTNTVGGRNKLKKIFDKTLTSILPPKP
YNDVCVGQSQDDSIVGMKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPDMSDQV
LRVFKADQQSRYIMIGKDTTAKEVVAQAIREFAVTAAAEAYSLCEVSVTPEGVIKQRRLP
DQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRA
FELFCAIEPTEYIDDLFKLHSKTGSVSLKRFEESINHETFWVATEVVRESNQLKRMKIVK
HFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRN
MAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGR
MASVNMDPSLMFRTRKKKWRSLGSLSQGSANAAVLDVSQTGGHKKRVRRSSFLNAKKLYE
DAQMARKVKQYLSNLSLETNEESLQTLSIQCEPSISTLPKNAGGKRPDTSPVVSRAANQQ
RGQLAKGNQALQVPAVALYPSRKRVPVKDLPPFGTSSPQSLKKILSLSEEGTDRHRRQPE
DAMSNASSQLSSPPSSPQSSPKKGYSRTGDAYSDSGHSEMSSRSILSNSSFDMAQEERRL
RHSGGVCESHLGGPRLERRATTDPDQYSLGSYSSMQDCRGIYAGCHTVLSSPSSEELTQD
QGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGSGGGGLPSGHEALLGGP
AALWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPETSSITSTGSEE
AKQLGRPSPSPITAGGKSFVSRKEGRFREPPPTPPGYTALTISDMTDGQHPATSAPSTTA
THSNRRPPDYTTALQRSRMVTQSPDSHQAHQGTKHWVGGLHRTCSPTEDQEEEEEDDDEQ
VSAV
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataaccgctttcggcaggctgtaatgatgaatccggctgaaagg
acgcaacaggacctggagattgtttactcttatctccatgggatggaggccttatccaat
ctgcgagagcaccaactgaggatcatgtgtgagacggtccgttatgagcggcacgaggcc
aatgaagtgctttactaccccgatgacgttggaagttgctggtatatcctgttatctggt
tcagttttcatcaaggagtccatgtttcttcccaggagcagttttgggaaacgatcagct
ggcagcctgcggcgtggatgtgaatgcatcgttcttgaaccctcagaaatgattgtggtg
gactatatggatgaaaatgaggagtactttcagcgacaagcctcacacagacagtcccgg
cggcgctttcggaagatcaaccagaaaggggagaggcagacaatcatcgacactgtggat
ccgtacaccaccggaaagccgcccatagcccgtgggtaccacacggaatgcaataaacct
cagctccctgcagacttcagcagacttcacctggccgacggcttacacccacaggtgacc
cacgtctcctccagccactcaggatgtagtatcaccagcgactctggaagcagcagcctg
tcagacatctaccaggccacagaaaacgagccaggtgacatggacctgagcggcctgcca
gagaccgccgtcgactctgaagaggatgatgatgaggaggacatcgagcgagcgtcagac
cccctcatgagccgggacattgtgcgggactgtctggagaaagaccccatggacagaacg
gacgatgatattgagcaactactggagttcatgcatcaactgccagcatttgctaacatg
accatgtcagtgaggagggaactctgcgccgtcatggtgtttgcagtagtggaacgcgcc
ggcaccatcgttctgaatgacggagaggagctggactcgtggtcggtgatcctgaatggc
tcagtggaagtgacacaccccgacagccggacagagatcctgtgtatgggaaacagtttt
ggggtgtcaccaacaatggagaaggagtacatgaaaggtgtcatgaagaccaaggtggac
gactgccagtttgtatgtatagcccagcaagagtactgctgcatccttaaccaggtggaa
aagaacatgcagaaggttgaggaggagggagagattgttatggtgaaggagcaccgtgaa
ctagaccgcactggcaccaggaaaggacacatcgtcatcaagggcacaccagagcgtctc
accatgcacctggtggaggagcactcagtggtggacccaacctatatagaggacttcctg
ttgacctacaggaccttcctctccagccccatggtcgtgggcaagaagctcctggagtgg
tttcacgaccccagtctcagggacaaggttacacgggtagtcttgctgtgggtaaacaat
cacttcaatgactttgagggagatcctgccatgactcactttttggaggaatttgaaaac
aatctggagaaagaaaaaatgtgtggacacctcagactgttaaatatagcatgtgctgct
aaagccaagccacggctggtgacactgaccaagccatccagggactctcctttggcgttc
agcctccttggaggtcaggagaaaggtttctctgtcttcattgatgccgtggagccagga
agcaaagcagcagaagctggtctcaagcgtggggatcagatcttggaggtcaatgggcaa
aattttgaaaacgtccagttcagtaaagccaacgagattcttaaaaacaacacccacttg
tcgataactgtgaagacaaatcttttagtgtttaaagagctgctaacacggccagaacat
gaccacgacttggatgtggatgaagaacttgacaggaagaacggagctccccacttacca
aagattggggacattaagaaggccagccgctactccataccagacctggctgtggacgtg
gagcaggttattggtctggagaaagccagcaagaaggccaagaccaatacagtcggaggg
cgcaacaaattaaaaaagatctttgataagacactcaccagcatcctgcctcccaaacca
tacaatgatgtttgcgttggccaatcacaagacgacagcatagtggggatgaagcagtcc
aaacagatcccaccagctctgccggtcagtggaaacctgtcgtcctcaaacccagacctc
ctgcagtcgcatcaccgcatcctggacttcaacaaccagcctgacatgtccgaccaagtg
ttacgagtcttcaaggcggaccagcagtctcggtacatcatgatcgggaaggacaccacg
gctaaagaggtggtggcccaggccatcagggagtttgctgtgactgcagcagccgaggct
tactctttgtgtgaggtgtcagtcacaccagagggcgtcatcaaacagaggcgactacca
gatcagctctctaaactagctgacagaattcaattaagtggcagatactacctgaagagc
aacatggagacagagacgctgtgctcagacgaggatgcccaggacctccttcgagaaggc
cagatctctttgttgcagctcagcaccgtggaggtggccacccagctctccatgagagcc
tttgaacttttctgcgccatcgagcccaccgagtacatcgacgacctgttcaagctgcac
tcaaagaccggctcagtcagcctcaagcgcttcgaggagtccatcaaccacgagacgttt
tgggtagcgacagaggtggtgcgagaatctaaccaactcaagcgcatgaagattgtgaag
cacttcatcaagatcgctctgcactgtcgagaatgcaagaacttcaactccatgtttgcc
atcatcagcggcttgaacttggctccagtctccagactgagagggacatgggagaagtta
cctagcaagtatgagaagctgtttggggacttgcaggacctgtttgacccttctaggaac
atggccaagtacagaaatgtcctcaacaatcagaacctccagccaccaatcataccactg
ttcccagtcatcaagaaggatctcaccttcctacatgaaggcaatgactctaaagtggac
ggcctggtgaactttgagaaacttaggatgattgccaaagaaatccgtcacgttggtcgc
atggcttcagtcaatatggatccttccctcatgttccgtaccaggaagaagaagtggaga
agtttaggctctctaagtcagggcagtgccaatgcagcagtgcttgacgtcagccagaca
ggcgggcacaagaagcgggtgcgacgcagctccttcctaaatgccaaaaagctctacgag
gatgcccagatggccagaaaggtgaaacagtacctgtccaacctgagcctggagaccaac
gaggagagcctgcagacgctatccatacagtgtgaaccctccatcagtacattgcccaag
aatgctggtggaaaacgaccagatacatcaccagttgtgtccagagctgccaatcagcaa
aggggccagctggccaaaggaaaccaagctctgcaggttcccgctgtggccctctaccca
tcacgaaagagagttcctgtcaaggatctgccaccttttggcaccagttcgccccagtcg
ctgaaaaagatcctctctctgtctgaggagggaaccgatcgacacagaagacagcctgag
gatgcgatgtccaatgcctcttcccagctctcttcccctcccagctccccacagagctcc
cccaagaagggctacagccggacgggggatgcctactcagactctggtcacagtgagatg
tcgtcccgctccattctcagtaactcctcctttgacatggctcaggaggagaggaggctc
cggcactctgggggagtttgtgaatcccacttggggggacctcggctggaaagaagagcc
acaactgaccccgaccagtacagtctggggtcctattcatccatgcaggactgtcggggc
atatacgctggctgccacacagtactgtcctctcccagttcagaggaactgacacaagat
cagggggatcgagtatccctagatgctgctgatagcggccgtggctcctggacatcctgc
tcttctggttcccatgacaacatccagaccatgcagcagggacgtagctgggagactttg
gcttttggcagtggaggcggaggactcccgtcaggacacgaggccttattaggaggtcct
gctgctttgtgggcagcgcaggctcgggggagctgggcgtctgccagctcctcctcatcc
tcggcagcatactggggggaggactcagagggagatactggcacaattaagagaagagga
ggaaaggatgtgaacgccgacccagagacgagtagcatcacttccaccgggtccgaggag
gccaagcagcttgggcggccgtctccgtcacccatcactgctgggggtaaaagctttgtt
tcccgaaaggagggacgttttcgtgagcctccacccactccacccggctacactgccctg
accatctctgacatgacagatgggcagcacccagcaacatctgctccttcaaccactgca
acccactcaaaccgccggccgccggactacaccacggctctgcagcgctcgcgcatggtc
actcagtcccccgactcccaccaggcccatcaggggaccaaacactgggtggggggcctc
caccgcacctgctcacccactgaggatcaagaggaggaagaagaggacgatgatgaacag
gtgtcagcggtttga
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integrated database retrieval system
