Nothobranchius furzeri (turquoise killifish): 107380053
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Entry
107380053 CDS
T05163
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107380053 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107380053 (dhx36)
03012 Translation factors [BR:
nfu03012
]
107380053 (dhx36)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107380053 (dhx36)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107380053 (dhx36)
Translation factors [BR:
nfu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107380053 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
NB-ARC
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
107380053
NCBI-ProteinID:
XP_015806564
UniProt:
A0A1A8B508
LinkDB
All DBs
Position
sgr06:complement(10088030..10123359)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSYGYGGGGGGRRGRRGGRGHNRDGSRDRFDRLGGGGGSRGGSDVDQDRPPPHLRGREIG
MWYARHGAVRRKQADRRSRAVVHMDEAREEHITKLLNSVKTERSGPRRDATYASASMSGT
RRTAADESSHCYFDGDLPEEEKHKTEVKSEEEEEDISPGQKNIQSDSSKKAVKDEPPENW
DEEDQEEDKKEELLRKDKDLEFLFQEVVRDNLKDDRFKMDLQSKKSDWKYKEMLKFREKL
PSFGKKEELVELINSNSVLVVSGETGCGKTTQVTQFILDDHINRGMGSTCRVVCTQPRRI
SAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPLLSS
ISHLVLDEIHERNLQSDVLLVIVKDLLRLRSDLKVVLMSATLNAEKFSKYFDNCPMIHIP
GLTFPVEEFLLEDVVEMTKYRPKNQDRRPTWKRGFWQGRNSRPEKEEKEQEYRESWPCYA
RTLQGRYSDSTIEALEMLDGDEKIDLELILTLIRHIVLNEGEGAILVFLPGWDNISGLND
LLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPAGVRKIVIATNIAETSITIDDVVFV
IDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNGLRASLLDAY
QLPEIMRTPLEELCLQIKILKLGFISQFLEKALDPPTEKAVNLAIKSLTDLNALDHTEGL
TALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRR
VLSRNSKSDHLTIVNAVKGWEEAKQRGVRYERDFCWDNFLSANTLQMLHNMKGQFAEHLM
HAGFVSSGDPKDPASNVNSDNEKLIKAVIVAGLYPKVAMIKPSHSKKRPGVKVYTQADGK
VCIHPKSVNAEEKEFNYAWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDISIQKDEDQE
TIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKISNPAPVDWNNRQSKDCAVITAIIDL
ITTQEQQQRLQPDVGIDLQRIVYVRQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggttacggtggtggtggtggtggaagaagaggcagaagaggtggtcgagga
cacaacagggatggaagcagagacagatttgacaggcttggtggtggaggaggttcaaga
ggtggttccgacgttgaccaggaccgtcctcctcctcacctcaggggccgtgagatcggt
atgtggtacgcacggcatggggccgtgagaaggaaacaagctgaccggagatcgcgggcg
gtggtccacatggatgaggccagagaggagcacatcaccaagctgcttaactccgtcaag
acagagcggtccggtccaaggagagacgccacttatgccagtgcgtctatgtctggaacc
cggaggacagcagcagatgagagtagtcactgttactttgatggggatttgcctgaagaa
gagaaacacaagactgaggttaaatctgaagaggaagaggaagacatttctccaggccag
aaaaatatacaaagtgattcatctaaaaaagcagttaaagacgagcctccagagaactgg
gatgaagaggatcaagaagaggataagaaagaggaactcttgagaaaagacaaagatctg
gagtttttatttcaggaagtggtcagagacaatttaaaggatgatcgctttaaaatggat
ctgcaaagcaagaaatcagactggaagtacaaagagatgttgaaattcagggagaagcta
ccgtcctttgggaaaaaagaggagcttgttgagctgatcaactctaacagtgtcctggtg
gtgagtggggagaccggttgtggaaagaccacgcaggtcactcagttcatcctcgatgac
cacatcaacagagggatgggctcgacgtgccgcgtggtctgcacgcagcctcgtcgtatc
agcgccatctcagtagccgagcgcgtggctgcagagagagcagaaagcgtggggaacggg
aattcttgtgggtatcaaatccgcctgcagagccggttaccacggaggcaaggttcaatc
ctgtattgtacgacgggcatcattctacagtggcttcgctcagatccgttgctgtctagc
ataagccaccttgtgttggacgagattcatgagagaaaccttcagtcagacgttctgctc
gtcatcgtgaaggacttactcagactccgaagtgacctcaaagtcgtcctcatgagcgcc
acgctcaatgcagagaagttttctaagtattttgacaactgtccaatgatccacattcct
gggttgacattcccggtggaagagttcctgcttgaggacgttgtggagatgacgaagtat
cgacctaagaatcaggaccgtcgtcccacatggaagagaggcttttggcagggccgcaac
tccagaccagagaaagaggagaaggagcaggaataccgtgagagctggccttgctacgcc
cgcacactacagggcagatactccgacagcacaatcgaggccctggagatgttagacgga
gatgagaagattgatctggagctgatcttgacgctgatccgtcatattgtactcaacgag
ggggaaggagcgatcttggtcttcctgccaggttgggacaacatcagcggtctcaatgac
ctgctgatggcgcagcagatgttcagatcagaccggtttgttatcatccctttgcactcc
ctcatgcccaccgttaatcagacacaggtattcaaaagacctccagcaggagtcagaaag
atcgtgattgctaccaatatagctgagaccagcatcaccatagacgacgtcgtctttgtg
atcgatggaggcaagattaaggagaccaacttcgacaccaacaacaacatcagcaccatg
acggctgagtgggttagcttggccaacgccaaacagaggaagggacgcgcagggagagtg
caaccaggaaagtgttatcatctgtacaacgggctgagggccagcctgctggatgcttat
cagctacctgaaatcatgaggactccgctggaggagctctgcctgcagataaagattctg
aagcttggtttcataagccaatttctggagaaagcccttgaccctcccactgagaaggca
gtcaaccttgccatcaagagcctcacagacctgaacgccctggaccacacagagggtctg
acagctctgggtttccacctggcccgtctgcctgtggagcctcacatcggcaaactcatc
ctgtttggagctctgctgggatgcctcgaccctgtactcaccatcgctgcttcactcagc
ttcaaagacccttttttcatccccctgggtaaagagaagatggcggacatgaggagaaga
gtcttgtctcgaaactctaaaagtgatcacctcactatcgtcaacgctgtcaagggctgg
gaggaagccaagcagcgtggtgtcaggtacgagagggacttctgctgggacaacttcctg
tctgccaacacactccagatgctgcacaacatgaagggtcagtttgcagaacatctcatg
cacgcaggtttcgtctccagcggcgaccccaaagaccccgcgtccaacgtcaactcagac
aacgagaagttaatcaaggcggtaattgtagctggactgtatccgaaggtggccatgatc
aaaccgtctcacagcaaaaagagacccggggtaaaggtgtacacacaggccgacgggaag
gtgtgcatccacccgaagtccgtcaacgctgaggagaaggagttcaactacgcgtggctc
atttaccacctgaagatgagaacaagcagcatcttcctgtacgactgcaccgaggtgtct
cccttctccctgctgttctttggaggagatatcagcatccagaaggacgaggaccaggag
accatcgcagtcgatcagtggatcgtcttcaggtccccagcgcgtatcgctcacctggtt
aaaagtttaaagaaagagctagattctctgttggaggagaaaatcagcaatccggctcct
gtagactggaacaaccgtcagtccaaagactgtgctgtcatcaccgccatcatagacctc
atcaccacccaggagcagcagcaaagactacagccagacgtgggcatcgacctccagagg
attgtttatgtacgtcaataa
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integrated database retrieval system
