Nothobranchius furzeri (turquoise killifish): 107380103
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Entry
107380103 CDS
T05163
Symbol
ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
nfu04514
Cell adhesion molecule (CAM) interaction
nfu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
107380103 (ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107380103 (ncam1)
04517 IgSF CAM signaling
107380103 (ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107380103 (ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107380103 (ncam1)
04090 CD molecules [BR:
nfu04090
]
107380103 (ncam1)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107380103 (ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nfu00537
]
107380103 (ncam1)
04091 Lectins [BR:
nfu04091
]
107380103 (ncam1)
Membrane trafficking [BR:
nfu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
107380103 (ncam1)
Cell adhesion molecules [BR:
nfu04515
]
Immunoglobulin superfamily
NCAM1/2
107380103 (ncam1)
CD molecules [BR:
nfu04090
]
Proteins
107380103 (ncam1)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
107380103 (ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nfu00537
]
Others
107380103 (ncam1)
Lectins [BR:
nfu04091
]
I-type lectins (Siglecs)
107380103 (ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_PDGFR_d4
C2-set_2
C1-set
Adeno_E3_CR1
C2-set_3
C2-set
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
107380103
NCBI-ProteinID:
XP_015806649
LinkDB
All DBs
Position
sgr06:13454931..13590888
Genome browser
AA seq
1182 aa
AA seq
DB search
MLRSRDALLASLLLVGCAASLEVQITPTHGEISLGESKFFMCDVGGVAKHIDWFGPSGDR
IEPNRPDLTVTRNDESSSTLTIYKAGTEDAGTYKCVATNGDQQGEATVQVKMFQRLTFTN
APSPQEFNEGDNANIVCDVVSSPPPTVFWKYKGTKIQMEKDVRFKVLDNNHLQIRGIKKT
DEGLYMCEARLMARGEIDLRAINVVVNVLPTIRIWQTEVNATADAEHPAVLTCAVDGYPE
PMVTWTRNGVKLEDEVKYGFNDDGSEMTIMDVTKLDEGEYTCIAKNKAGENEKELSLRVF
VKPKITYIVNKTTSEMEEETLTCEATGDPTPTISWSYGEHFFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYVKYTDAGQYLCTARSTIGEDKQAVYLEVRYAPKI
HGTVAVYTWEGNPVNISCEVRAYPSDVSIVWLRDGLQLPNSNSTNVKIFRSPTSSYLQVT
PESENDFGSYNCTASNEMGTESKEFLLIQAEVPSAPFIDEVRPFSTTALIQFEEPESTGG
VPVLKYRTQWRVEGRGSWVTRIHEVQDGFGNELTITGLKPDTSYEVKLSAANGKGEGESS
SAELFKTAPVQGNPNPPKLEGSLQATGNSLKVSWIAQDDGGSPILHYLVRYKPIQGSGWK
PEIRMPSGSEHVVLQGLEWDTEYSVYVVAENQKGKSQPATMSFRTSSKPEAIPDLGEEGV
LPMGTMLWAGILVVVFVLLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHNLEEGKAAFV
KDESKEPIVEVRTEDECTANHNAAGPIEPNETTPLTKPELVASLALDTPSSVATNSDTAT
ATNDPGQESPSSETTTLTCSLSTLANEPSPTPLAAPAPTPESNAAPPAPVISSTAVEAKM
APLLEERGYKTQEEQEKITPPRTPEQPRPQKPGTPIPPKRKHSPKLAAMNAKNSPPVSPL
AVSSTSSPSTPDMKTPAPNPPVTRLPPQPNPNPDYNPAPDSSSPSFAAFDTVKPTESSAD
NNIPATKPVRGVPSDDTGAAEDPDASSLLPITQIVSAVSDEVPTPAPDLYDITPADTELK
NANLELELTNGTGRHPRPLSDLISLESPPADPSQPSGDGTDLPPSGPVVEASETLVKTAP
PVNDEKIYADEKSKLEEGDLPHPLISAAHNNVIQTNATESKV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgctccggtccagggatgctctgttagcctcgctccttcttgtgggctgtgcagcttca
ctggaagtgcagatcaccccaacgcacggtgagatcagtctcggagagtccaaattcttc
atgtgtgatgttggaggtgttgccaagcacatagactggtttggcccaagtggggacagg
atagagccaaacagaccggacctgacggtaacccgtaacgatgagtcatcctccaccctc
acgatttataaagctgggaccgaagacgctgggacatacaagtgcgtcgccaccaacgga
gaccagcaaggagaggcaaccgtccaagtgaaaatgttccaaagactcactttcacaaac
gctccctctcctcaagagtttaacgaaggagacaacgccaacatagtgtgtgatgttgtc
agctcaccccctcctactgtgttctggaaatataaaggcaccaaaatacagatggagaaa
gatgtccgttttaaggtgctcgacaataatcaccttcaaatccgtggcataaagaagaca
gacgagggcttgtacatgtgtgaagctcgcctcatggcccgcggcgagattgatctccgt
gccatcaatgttgtcgtaaacgtgcttccgaccatcagaatatggcaaacagaagtgaac
gccacagcagatgctgagcatccggccgtgctgacgtgtgccgttgatggctatcctgaa
cccatggtgacctggacaagaaacggggtcaagctggaggatgaggtcaagtacggtttt
aatgacgacggctcagaaatgacgataatggatgttaccaaactggatgaaggagagtac
acctgcatcgccaagaacaaggccggggaaaatgaaaaggagctcagcctgagagtgttt
gtcaaacccaagatcacttacattgtgaacaagaccacatcagagatggaggaggaaacg
ctgacatgcgaggcgactggagatccaactcctaccatcagctggagctacggggagcac
tttttcaccgagggcgagcaggcacatctaaacaggatctatcaggcatcatggactcgg
cctgagcaacacaagagcctggatggaaacgtagtggtcaggagtgacgctcgcgtgtcc
tccctcaccctcaagtacgtcaagtacacagacgctggtcagtacctctgcacagctcgc
agtaccatcggagaagataaacaagccgtttatctggaggttcgctatgctcctaagatc
catggaacagtagcagtgtacacctgggagggaaatcccgtcaatatcagctgtgaggtg
agagcgtatcccagcgatgtttccattgtgtggctgagagacggactgcagcttcccaac
tcaaacagcaccaacgtcaagatcttcagaagtcccacctccagctacctgcaggtcacc
cccgagtctgagaacgactttgggagctacaactgcaccgcctccaacgagatgggaaca
gagtccaaagagttcctgctcatccaggccgaggttccatcagctccattcatcgatgaa
gtgaggcccttctccaccactgcactgatccagtttgaagagcctgaatccaccggaggt
gttccggtcctgaagtacagaacccagtggagggttgagggcagagggagctgggtgacc
agaatccacgaggtccaagatggcttcggcaacgagctgacgatcacgggcctgaagccc
gacaccagctacgaggtgaagttgtcagccgctaacggtaaaggtgaaggagaaagcagc
tccgcagaactcttcaagacggcgcccgtgcaagggaatcccaaccctcctaaactggaa
gggtcccttcaggcaacgggaaactccctcaaagtcagctggattgcgcaggatgacggc
ggctctcccatcctccactacctggttcgctataaaccaatccagggctcagggtggaaa
ccagagatccggatgcccagtggcagcgagcatgtggttctgcagggtttggagtgggac
actgagtacagtgtgtatgtggtggcagagaaccagaaggggaagtcccagcctgccacc
atgtccttcaggacgtcctcaaagccagaagccatcccagatttgggtgaagagggagtg
ctccccatgggcaccatgctgtgggcggggatccttgtggtggtgtttgtgctcctgctg
ctagctgtggacgtcacatgctactttgtcaacaaatgtggcctcatcatgtgcctctgt
ggcaaatcgggcacggggacgaagggacacaacctggaggagggaaaagcagcttttgtt
aaagatgagtccaaagagccgatagtggaagtcagaacagaggacgagtgcacagccaat
cacaatgcagcaggacccatagaacccaatgaaacgactcctctcacaaagccagagctg
gtggcttctctggcactggacaccccctcctctgtagccaccaactctgacacagccacc
gcaacaaacgaccctggccaggagagcccctctagcgagaccactaccctcacatgcagc
ctgtccaccctggccaacgaaccctcacccacccctctcgctgctccggccccgacccca
gagtctaacgcggcgccgccagcaccggtcatctcctccaccgctgtagaagctaaaatg
gcccccttgcttgaagaaaggggttataaaacacaggaggagcaggagaagataacccct
cctcgaactcccgaacagcctagacctcaaaaacctggaacgccgatcccaccaaaacgc
aaacactctccaaaactagcagctatgaatgctaaaaacagccccccagtttcccccctt
gctgtgtcttctacatcttccccttctactccagacatgaagacacctgctccaaatcca
cctgtcactaggctacctccacaacctaatcctaacccagattataaccctgctcctgat
tcctcctcgcctagctttgccgcctttgacacagtcaaacccactgagtcatcggctgac
aacaacatacccgcaacaaaacccgttagaggtgttccctcagatgataccggggctgct
gaagatccagatgcttcctcgctgttaccgatcactcagatagtttctgcagtttccgac
gaagtcccgacgccagcgccagacctgtacgacataacgcctgcagacacagagctcaaa
aacgctaatttagagttggagctgacaaacggcacaggaagacaccctcgacccctctca
gatctgattagcttagagagcccgcccgcagacccctcccagcccagtggagacggaaca
gacctccccccctcaggcccagttgtggaggcttcagagactctggtcaagaccgctcct
cctgtcaacgatgaaaagatttatgctgatgagaaaagcaaactggaggagggagactta
ccacatcctctgatctctgcagcacacaacaatgtcattcagacaaacgccacagagagc
aaagtatga
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integrated database retrieval system
