Nothobranchius furzeri (turquoise killifish): 107380123
Help
Entry
107380123 CDS
T05163
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03030
DNA replication
nfu03420
Nucleotide excision repair
nfu03430
Mismatch repair
nfu03440
Homologous recombination
nfu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107380123 (rpa1)
03420 Nucleotide excision repair
107380123 (rpa1)
03430 Mismatch repair
107380123 (rpa1)
03440 Homologous recombination
107380123 (rpa1)
03460 Fanconi anemia pathway
107380123 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107380123 (rpa1)
03032 DNA replication proteins [BR:
nfu03032
]
107380123 (rpa1)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107380123 (rpa1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107380123 (rpa1)
DNA replication proteins [BR:
nfu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107380123 (rpa1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107380123 (rpa1)
MMR (mismatch excision repair)
107380123 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
107380123 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
107380123
NCBI-ProteinID:
XP_015806683
UniProt:
A0A1A7ZKK7
LinkDB
All DBs
Position
sgr06:complement(14910076..14934775)
Genome browser
AA seq
604 aa
AA seq
DB search
MPKLSEGAIEALANGSGWNDAVLQLVNIRKIEGGSGIPRFRVMMSDGRHTLSSFMLSTQL
NYLAEENILAPNCVCILKKHVTNILKDGRRVVIILETELIKPAEEVSGKIGDPTPYFDGQ
NKGQQSGPVPAAPGPEVRPPLQAQNKNDVNIGFSRDFAKKAPSVMPDTPGGSSKVVPIAS
LNPYQSKWTIRARVTNKSSIRTWSNSRGEGKLFSMEIVDESGEIRVTAFTQEVDKFFPLI
EVGKVYYISKGSLKIANKQYTSVKNDYEMTLNGETSIVPCEDSCDVPTVQCDFVSIAELE
NRDKDAIVDVIGVCKSVDEMTRLTTKNNREVSKRTLSLMDMSGKLVTVTLWGEEAEKFDG
SGQPIVAIKAAKLSDFGGRSLSASFSSTLMVNPDIPEAYKLRGWFDKEGHAMDGQSLTET
KGSGGGSTNWKTLSDVKNEHLGHGEKADYYTCIATVVFLRKENCLYQACPTQDCNKKVVD
QHNGMFRCEKCDKDFPNFKYRLILSANIADYTDNQWVTCFQESAEAILGQNAAYLGQLRD
SSEAALDEVFQQSNFNTFVFRNRVKLETYNDESRVKATVFDVKPVDHRDYSKRLIINIRS
MAVK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaactttcagaaggcgcgattgaggctttagctaatggctccggttggaatgac
gcagttcttcagctggtgaacattcgcaaaatagagggaggaagtgggatacctcgcttt
cgggtgatgatgagtgatggacgccacacactgtcatcctttatgctttccactcagttg
aactacttggctgaggaaaacatcctcgccccaaactgtgtgtgcattctgaagaagcat
gtgaccaatattctgaaggatggacgccgagtggtcatcattttggaaaccgaattgatc
aaacctgctgaagaagtcagtggtaaaattggagaccctactccttactttgatggtcag
aataaaggccagcagtctggccccgtccctgcagctccaggccccgaagtcagacctcca
ctgcaggcacaaaacaagaacgacgtgaacataggtttcagcagagattttgccaaaaag
gctccatctgtaatgcccgatactccaggggggagctccaaagttgtacccatcgccagc
ctcaacccctaccagtccaagtggaccatccgcgcccgtgtcaccaacaagagcagcatt
cgcacatggagcaactctcgtggcgaaggcaaactcttctccatggagattgtagatgag
agcggagaaatccgagtgacagcttttacccaagaagtggacaaattcttccctttgatc
gaggttggcaaggtctactacatctccaagggctccctgaagattgccaacaagcagtac
acatcggtgaagaatgactacgagatgacgctcaatggggaaacgagcatcgtcccctgt
gaggacagctgtgacgttcccacggtgcagtgtgactttgtctccattgctgagctggag
aacagggacaaagatgccattgttgacgtgattggagtgtgcaagagcgtggacgagatg
acccgcctcaccaccaagaataaccgcgaagtgtccaagaggacgctgagtctgatggac
atgtctgggaagctggtgactgtcactctgtggggagaggaggcagagaagtttgacggc
tctgggcagcctatcgttgccattaaggccgcaaagctctcagactttggaggccgctcg
ctttctgcgtccttcagcagcaccctgatggtcaacccggacatccccgaggcgtataaa
ctccgaggctggtttgacaaagaaggccacgccatggatggacagtctctgacggagacg
aagggcagcggaggaggaagcaccaactggaagactttgtccgacgtgaagaacgagcat
ctgggacacggagaaaaggccgactactacacctgcatagccaccgtggtgtttctgcgg
aaggagaactgcctttatcaggcctgcccgacccaagactgcaacaaaaaagtggtcgac
cagcacaacggcatgttccgctgtgagaagtgcgataaagacttccccaacttcaagtac
cgcctcatcctgtctgctaacattgcagattacaccgacaaccagtgggtgacttgcttc
caggagagcgcagaggccattctgggccagaatgcagcttacctgggccagctcagggac
tcgagtgaagctgcgttggacgaagtcttccagcaatcaaatttcaacacgtttgtcttt
cgtaaccgagtgaaactggaaacgtacaacgatgagtccagagtaaaagccacagtgttc
gatgtgaagcccgtcgatcacagagattacagcaagaggctgatcataaacatacgaagc
atggctgtcaagtag
DBGET
integrated database retrieval system
