Nothobranchius furzeri (turquoise killifish): 107380230
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Entry
107380230 CDS
T05163
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107380230
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107380230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
107380230
NCBI-ProteinID:
XP_015806856
UniProt:
A0A8C6MCY4
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Position
sgr06:20597731..20610405
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AA seq
937 aa
AA seq
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MAQLYYKKNDTSSYRDRIPLRIVRAESELSPMEKAYLGAVEKGDYGSVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNIHVGDALLHAIRKEVVGAVELLLNHKR
PRGEKQVPPILLDRQFSDFTPDITPIILAAHTNNYEIIKLLLQRGVSVPQPHAVRCNCVE
CMSSSDMDSLRYSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSNVENEFKAE
YQELSQMCKQFAKDLLDQTRSSKELNIILNYRDDINPLLDENINDLARLKLAIKYSQKEF
VAQPNCQQLLASRWYSEFPGWRRRHWAVKLITCIFIGFLFPLLSTFYLIAPKSFYGLSIR
KPFIKFICHTSSYLTFLVLLFLASQHIDSSDTAIRDAAQSPASSIYSSTPACRRAETQGP
APTVVEWIILPWVIGYIWMEIKQMWDSGLKDYLDDWWNIMDFIMNSLYLATISLKIVSYT
KYSGCKPRKDWEMLHPTLMAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL
KFLFIYCLVLLAFANGLNQLYYYYKTEGKPKENPCKGIRCSTQNNAFSTLFETLQSLFWS
IFGLISLYVTNVDPDHEFTEFVGSTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIE
WKFARTKLWMSYFEEGGTLPSPFNIVPSPKSVCYLAGWIKTHLFRRRGKKTCDSFETLGT
RAAENIRLTHEFQEVMKNLVKRYVAAKIRDAKTEEGLTEENFKELKQDISSFRYEVLAMT
KNRPNCGGSSPLSGSSLAYAGNSFRYCPKVSTDEPQKKPKLLDVINSTTLQNKAGKTTIS
VSSDKSTDGLVVLSSTEKTLSNEVLNAECPQRQRQLSTQNETCSPPEQNPFNTGSSNKDR
NVETSQTVPTDVQETGFSFTVHTSEVENASCNANTTR
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgtattacaagaaaaatgacacctcctcgtacagagaccgaatcccgttg
cggatagtgcgggctgaatcggagctctctcccatggagaaagcctacctgggggctgtt
gaaaagggggactatggaagtgtgaagcaagccctggaggaggcagagatttatttcagg
atcaacatcaactgcatcgaccccctggggcgcaccgctctgcttattgccatcgaaaac
gagaacttggagatcatagagctgctgctgagctataacattcatgtgggtgatgccctg
ctgcacgccattcggaaagaagtggtgggagctgttgagctgcttcttaaccacaagaga
cctcgtggggaaaaacaggtcccaccgattcttttagaccggcagttttccgacttcacc
ccagacatcaccccgatcattctcgcagctcacaccaacaactatgagatcatcaagctg
cttctgcagcgaggtgtttccgtacctcagccacatgcggtgcgttgcaactgtgtggag
tgcatgtccagttcagacatggacagcctgcgttactcccgctctcgtcttaacatctac
aaggccctagccagcccctcgctcatagctctctccagcgaggatccgttcctcacagct
ttccaactcagctgggagctgaaggagctcagcaatgtggagaacgagttcaaggcagag
taccaggagctgtctcaaatgtgtaaacaatttgcaaaagatttgttggaccagactcga
agttctaaagagttgaacattatcctcaactaccgtgatgacatcaaccctctgctggat
gagaacattaatgatttagcccggctgaagctggccatcaaatattcccaaaaagagttt
gtcgctcaaccaaattgccagcagctcctggcatctcgctggtacagtgaattcccgggc
tggaggaggcgtcactgggcagtgaagctcatcacctgcatcttcattggcttcctcttt
ccactgttgtccaccttctacttgattgctccaaagagcttctatggcctgtccattcgt
aaacccttcatcaagttcatctgtcacacgtcttcctatctgaccttcctcgtcctgctc
ttcttggcctcacagcacattgactctagcgacacagctatccgagatgcagctcagagc
ccagcatccagcatttactctagcacaccagcatgccgccgagctgaaactcagggtcca
gcacccaccgttgtggaatggatcatcctgccctgggtgattggttatatatggatggag
atcaagcagatgtgggacagtggtttaaaggactacctggatgactggtggaacattatg
gacttcataatgaactccttgtatctcgctaccatttctctgaagatcgtttcctacaca
aagtacagtggatgcaagcctagaaaagattgggagatgttgcatcctactttgatggca
gaagccttgtttgccatcgcaaacatcttcagttccttacgcctcatctctctcttcact
gccaactcccacctaggccctttacagatatctctgggccgcatgcttctggatatcctc
aaattcctcttcatctactgcctggttctcttggcctttgccaacggcctcaatcagctc
tactattattacaagacagaaggaaaaccaaaagaaaatccttgcaagggtattcggtgt
agtacacagaacaacgccttttcaacattgtttgaaacccttcaatcgttattctggtct
atatttggcctgattagcctctatgtgaccaacgtagacccagatcatgaattcacagaa
ttcgtgggctccactatgttcggtacatacaatattatctccttggtggtgcttctgaac
atgctaattgcaatgatgaacaactcctaccaacacatcgctgatcacgcagacatagag
tggaaatttgcacgaactaaattatggatgagctattttgaagaaggggggactttgcca
tctccattcaacatcgtccccagtccaaaatcggtttgctatctagcaggatggataaaa
acacatttgtttagaagacgaggcaaaaaaacatgcgactcatttgagactttggggacc
cgtgcagcagaaaacatccgattaactcatgaatttcaggaagtcatgaagaaccttgtg
aagcgatatgtggctgcaaagatcagagatgcaaaaactgaagaaggactgacggaggaa
aatttcaaggaactgaagcaagacatctcaagcttccgttatgaagttttggcaatgacg
aagaataggcctaactgtggtggatcaagtccactttcaggctcttcgctagcttacgca
ggaaactcgtttaggtattgtcccaaagtatctactgatgaacctcaaaagaagccaaag
ttgctcgatgtgatcaactccaccaccttgcaaaataaagctggcaaaaccaccatctct
gtgagctcagataagtcaacggatggtttggttgtgttgtctagcacagaaaagacgttg
tccaatgaggttttgaatgctgaatgtcctcagagacagaggcaactttccactcagaat
gaaacatgctcaccgccagagcagaatcctttcaatactggaagttcgaacaaagatagg
aatgtggaaacctcacagacggtcccgactgatgttcaagaaacgggtttttctttcaca
gttcacaccagtgaagtagaaaatgcctcctgtaatgcaaatacgactcggtga
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