Nothobranchius furzeri (turquoise killifish): 107380244
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Entry
107380244 CDS
T05163
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03440
Homologous recombination
nfu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107380244 (brca2)
03460 Fanconi anemia pathway
107380244 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107380244 (brca2)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107380244 (brca2)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107380244 (brca2)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107380244 (brca2)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107380244 (brca2)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107380244 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
107380244 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
107380244
NCBI-ProteinID:
XP_015806884
LinkDB
All DBs
Position
sgr06:complement(21432770..21448605)
Genome browser
AA seq
2987 aa
AA seq
DB search
MDVSLKNMYDAFKDEIWKELGPLDSNWFEVLTTQAPAYEGNAADTDELCANQEGQFKTPL
NKTALDSQLFSTPKVFRHRRVVSPEDEQFFTAAQEKGSSLPWMATQSPCMFPPSGQEIRD
VKSEGAELQNADCFDLLDTPNKSAISYAKHISESLGAQINPDISWTSSLNTPPAVASTLI
LSKTDESPCPVTVTADRNVVFVRKLFPSLSKSVEAPKNKPTSSAAKGAISSKALDFLQTP
LSQSSDLWQQGDAVEDEEVHNRVLGAFDGPEKALSSFFPNSFSTLRKIKSDRIKRKQIIQ
TKENCSSSKDVVLSHNAVSSGEVTSDLASGGLPSTPLAKTADPAVSQWSPLNLSEIPPCA
LESNISTQQPRSDISSVQLTRPSTNIQNTGFVTKRRKFIYTVSPSKMQVQEGHHPRKMDP
SSRIQHSGQEADVKLLVKVTGDGEKADLNLRNTDGEEINVPVGAQVQEFDMSQLCKDFAH
DFSQVPNFGQQEKGAKQTLNNFSPSACLSAMKHAKQKEKQTSILRQSDGISNRGQTLSFA
ESTVNDSGFQSGDGDIIRTMTSLNPHSENTGRSRALAATASLLTEKENMITHLGCEAETT
LQKSEKRQTLDTGKDQSRIENKRTQQPSSVGNIDKTNYIPLNGQTTDCLSDKTNPSGSAS
GFKTASNKGIHILSANLEKAKRLFEEAEGKGTFLNQFAKRDRVDTQNNSLNNGSLTRNSS
NSNQLTYLGGTIRNVDSLLTASEEADVTELCSLLEDSQFEFTQFKTAKLKWHDQDDNIPH
KPDKELDPDFLADIDFDDSFSSEMGRNQAVHQICDKIASDSDDITNGKAANQSSDMSLSC
ALKEEGSSVAAVAENIYGNMTCLLLPEPNTVRSEREDILELDTKSSPMHSVRFTTARGNI
LKVSKKCFSKAKALFADLEDNLTDQKSQDKQIVDIDGKTEQNSDMCKKDLEVILKDKRHV
EERVQDCSPKIKHSVSSPKQVQGVGDRNDTNNLNNHKSCSTMFQSDFSMASGKGISLSAK
CMQQADVLFKDCNRDDMFEKSLKSLHESTKSKKSFSEYKILQVDTSAEQEPGCKKFENLN
AELIAQHSKEPHMDKVQMSSNGSLALKNAKSFHGNPFITSNPFSTHCTSKNIDSSVTGDE
FCTASGKKVFVSTDAMRKAEHLLNRGHLPEDKNMESNQKENASRTGVDESYKKKATGFQT
AGGKEVSISSASLKKAKALFKECEREDEMSKNTILTTGPPIRSGGFSAASGKPVVLSSEA
LQKAKAIFSDISLSTDISNASDMTRSERKHEEDQDYVNKRDGGFTTAGGTKVHVSQKNLL
KAKCLFKECDTVVLTKTIQETAALFTDCDVDGNNRVLAEDLKDQVNLGEPRADQRARLSV
SKEPEHGLSERTNKQVKPKEEALPQQSNGFLTASGKGVNISSKALKRAKTLLNNCKGVEN
QTNNFPPHSTVSALSFGHAGFSSASGKPVRLSSESLQKSKSFFSGIDTEIPDRSQTMKGD
RKQDHCTKTERIQSNFTTARGGKVSVSQNHLLNAKSLQEVDDSASEKATQVEDVFYNEQT
GGTADGISNIPSEHTSKALIRETDILKKNLSKCKTKPRNIPEEIRNGCTEDTGDQVKQEV
VMLPQQSGRFQTASGKAVAVSHKALTRAHVLLSDSEGTKDKIHDSLPLSKILSTDTPICN
SRFSAASGKPVAFSSDALQKAKAFFSNIPTISATNKSDEKHNVQSNAETCHGGFTTAGGR
NVHVSEESLMKAKHLLGELSEECHHSLLSSQDTQELNISKEKDLETISCFKVAPSRSRDV
LAKKQGPAEGRSLNLTSGTDYLSEEEDSNMFGFDLSLSRYSKRAEVLKSDESSDRILTSL
NLTSCTETQHKFLAQEALDCTKALLEDEVLADQSFSDDSKPIITTIEEEKGRRKILTGEP
DLIGPPPSKRRLLEEFDRSVESPKVLHPVKSCPDGLMKDRRVFKYSASLCPNITKPHGNT
KVYMDTRLQRTMLPHRSTPGGGRTSHSKMLAFVPPFIQNSKREIPKMPELKENTRTPAFV
PPFKKLKPSFQDSSSKEEEKHQVSIIMKCNNNTYTPPVIKYPNTTNVTCSADPENQKATY
KDDVPVDFGGLSPAGKALDMNSSVTQDEFQNIELARDMQDMRIRKKKHQTIRPLPGSLFL
SKTSGVTRIPLKVAVNGKSPARCTPEQLYKYGVQKLISEVTSETAESFRFSLLQFIKWET
FLDGGGVQLADGGWVIPRKDWTAGKEEFYRALCDTPGVDPKLISEAWVYNHYRWIVWKQA
SMEKCFPETMGSFCLTPEQVLLQLKYRYDVEVDHSRRPALRKIVEKDDTAVKTLVLCVCE
IVSNDLSPKKQSHNNTRTPKSADTKTETPCAVVRLTDGWYAIKAQLDEPLTAMLHKGLLT
VGGKLIIHGAQLVGSQDACSPLEAPDSLMIKIFANSSRRARWDAKLGFHRDPRPFLLPLS
SLYGSGGPVGCADIVILRSYPIQWMERKAGGVVFRSTRAEEKEARRYDSQKHKTMEMLFT
KIQADFEKEEQGNRKPQQKRKSMSHQDMASLQDGEELYEAFGDDLAYLEACLSEQQLEAL
HAYRRSLMDKRQAELQDRYRRALDAEGDEKGCPKRDVTPVWRLSVADSRVQHSSVYQLNL
WRPSSDLQSLLKEGCRYKVYNLVASDGKKRSGIETVQLTGTKKTQFQDLQASQAWLSGHF
QPRVSTNFETLQNAEFQPLCGEVDLTGYIINVIDEQGSSPAFYLADGRLNFVKVRCFNSF
SQAGLEDVVKPGVLLSLSNLQLRGQSLHPAPVVYAGDLTVFSTNPKEAHLQEALSHLKTV
IQSRENFFQIAEEKLSHLIKTDATSSVSCPYLQPQTPVTGTHRKQDPTTNVTFQKPARNL
GSFTPVSRNPPAATPSEKDPRCLKRKRALDYLSRIPSPPPLSHLGSFASPCVNKTFNPPR
RSGTPRTLQTVQTPAQKPTDSLVEDEWVNDEELAMIDTQALLGGDLS
NT seq
8964 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccttaaagaacatgtacgatgcttttaaagatgaaatctggaaagagctg
ggacctttagactcgaactggtttgaagtactaacaacccaagcaccagcctacgaggga
aatgctgctgacacagatgagctgtgtgccaaccaagagggacaatttaagacaccttta
aacaaaactgctctagacagtcagctgttttctacccctaaagttttcagacaccgtcga
gttgtgtcgcctgaggatgagcagtttttcacagctgcacaagaaaagggctcatcgtta
ccatggatggcaacacagagtccttgcatgtttccaccatcaggacaagaaatccgagat
gtgaagagtgaaggtgccgagcttcagaatgcggactgctttgatttgctcgatacccca
aacaaatccgcaatcagctacgccaaacatatttctgaaagccttggtgcacagattaat
ccggacatttcatggaccagttctctgaacacaccaccagcagtggcatccaccctgatc
ttatctaaaactgatgagagtccctgtccagtaaccgtcactgctgacagaaatgttgtt
tttgtacggaaacttttcccttctctttcaaaatctgttgaggcaccaaagaacaaaccc
acgtcctctgctgccaaaggtgccatttcatccaaggcacttgattttctacagactcca
ttaagccagagttcagatctttggcaacaaggagatgctgttgaagatgaagaagttcat
aacagagtgctgggggcctttgatggacctgaaaaggctctctctagtttctttcccaac
agtttttccactttgagaaaaattaaatctgacagaatcaaacgcaagcaaataattcaa
actaaagagaactgtagcagctcgaaagatgttgttctttcacacaacgctgtgtctagt
ggagaagtgacatctgatctggcatctggtggattaccctctacaccactggcaaaaact
gcagaccctgctgtcagccagtggtctcctttaaatttatctgaaattccaccttgtgct
ctggaaagcaacatctcgacacaacagcctcgaagtgatatcagctctgtgcagctcacc
agaccttcaacaaacatccaaaacaccggatttgttacgaaaaggagaaaatttatctac
acggtttcaccttcaaaaatgcaagttcaagaaggtcatcatcctcggaaaatggaccct
tcatcaagaattcagcattctggacaagaagcagacgttaagctgttggttaaggtcaca
ggtgatggagaaaaggcagacctaaacctaagaaacacagatggagaagaaatcaatgtc
cctgttggtgcacaagtccaggaatttgacatgtcacagctttgcaaagattttgcacac
gattttagtcaagttcctaactttggtcagcaggaaaaaggagcaaagcaaactttaaat
aacttctctccatcagcgtgtctctcagccatgaaacatgcaaagcagaaagaaaaacaa
accagtattctccgccaaagtgatgggatcagtaacagaggacagaccctctcttttgct
gaaagcactgtaaatgacagtggattccagtctggtgatggagacatcattcgtacgatg
acatcattaaatcctcactcagaaaacaccggtcggagtcgagcgttggcagctactgct
tctctgttgactgaaaaagaaaacatgattacacatttgggctgtgaagctgaaaccacg
ctgcagaagtctgagaaaaggcaaaccctggacacaggaaaagatcagtcacgcattgaa
aacaaaagaactcaacaacccagcagtgtgggaaatattgataaaacgaactatattcca
ttaaatggtcaaactactgactgtttgtctgataagacaaatccttctggatctgcatca
ggattcaagacagcttccaataaaggtatacacatcttgtcagccaatctggagaaagcc
aagcgactctttgaagaggccgaaggtaaagggacttttcttaatcagttcgccaaacgt
gaccgtgttgacacacaaaataacagcctcaataatggatcattgacaagaaactcttct
aactcaaatcagctaacgtatttaggtggcacaattagaaatgtggattctctgttaact
gcttcggaggaagctgatgtgacagaactgtgctcacttttagaagatagccagtttgaa
tttacacagttcaaaactgcaaaattaaagtggcatgaccaagacgacaacattcctcac
aaacctgacaaagaacttgacccagattttcttgcggatatcgattttgatgatagcttc
agctcagaaatgggaagaaaccaagcagtccatcaaatatgtgacaaaatcgcctcggat
tctgatgacataacaaatgggaaagccgcaaatcagtcctcggatatgtcattgtcatgt
gcactgaaagaggaaggttcttctgtagctgctgtcgcagagaacatttatggcaacatg
acgtgtctgttgttacctgaaccaaatactgtcagatctgagagagaggacattctcgag
ttggacaccaaaagttctccgatgcatagcgtaagatttactactgccaggggaaacatc
ttgaaagtttcaaaaaagtgttttagtaaagcaaaagctttgtttgccgatttggaggat
aatctgacagatcagaaatcacaagacaagcaaattgtggatattgatggcaaaacggaa
caaaattctgacatgtgcaagaaggatttggaggttatcctcaaagacaagcgtcatgtt
gaggagagagtacaagactgttctcccaaaataaagcattcagtcagttcccccaaacaa
gttcaaggagttggagatagaaatgacacaaataacctaaataatcacaaaagctgctca
acaatgttccaaagtgatttcagcatggctagtgggaaaggcatatctctttcagcaaaa
tgcatgcaacaggcagatgttcttttcaaagattgtaacagagatgatatgtttgaaaag
agcctaaaatccctgcatgaaagcaccaagagtaagaaaagcttttcagaatacaaaatc
ctgcaggttgacacttctgcagaacaggagcctggctgcaagaaatttgaaaatctaaat
gctgaactgatagctcaacactcaaaagaaccacatatggacaaagtacaaatgagtagt
aatggctcactggctttgaaaaatgctaagtcttttcatggaaaccctttcataacctca
aatccgttttccacgcattgcacatcaaaaaacattgattcatctgtcactggtgatgag
ttttgcacagctagtgggaagaaggtctttgtgtcgactgatgcaatgagaaaggctgaa
catcttttgaatcgtggccacttacctgaggataaaaacatggaatctaatcagaaagaa
aatgcatcaagaacaggagttgatgaaagttacaaaaaaaaagctactggatttcagaca
gctggtggaaaagaagtttcaatttcatctgcctctttaaagaaagcaaaagctttgttt
aaagaatgtgaacgtgaggatgaaatgagcaaaaatacaattcttactactggcccacca
atccgaagtggtggtttttctgcagccagtggtaaacctgtggtattgtcatcggaggcg
ttacagaaggctaaggcgatcttcagtgacatcagtttgagtacagatatttcaaatgct
tctgacatgacaaggagtgagaggaaacacgaagaggatcaagactatgtaaacaagagg
gatggtggattcacaactgcaggggggacaaaagtccacgtgtcacagaagaatctttta
aaagccaaatgtcttttcaaagaatgtgatactgtggttttaaccaaaaccatacaagag
acagctgctctcttcacagactgtgatgtggatggtaataacagagtattagcagaagac
ttgaaagatcaagtaaatcttggagaacctcgtgcagatcaaagagcaaggttgagtgtt
tctaaagagcctgaacacggattgtctgagcgcacaaacaaacaagtaaagccaaaagaa
gaggccttaccacagcaaagcaatggatttctgaccgcaagtggaaaaggagtcaatatt
tcatccaaagctcttaagagagcaaaaaccttgttaaacaactgcaaaggagttgagaat
caaacaaacaatttcccgccacattccactgtcagtgctctgtcatttggacatgcagga
tttagttctgccagtggtaaacctgtaagactttcatccgagtcccttcagaagtcaaag
tcttttttcagtggcatcgacacagaaatcccagacaggtcacagactatgaaaggcgac
aggaaacaagaccattgtaccaaaacagagagaatacaatctaactttacaactgcaagg
ggagggaaagtcagtgtgtcacaaaatcatcttctgaatgcaaaatctcttcaagaagtt
gacgattcagcttcagaaaaagctactcaggtggaggatgttttttacaacgaacaaaca
ggcggcactgcggatggtatcagtaatatcccatcagagcatacaagtaaagctcttatt
agggaaactgacattttgaagaaaaacttgtccaaatgtaaaaccaaaccaagaaacatt
cctgaagagattagaaacgggtgtactgaggacacaggcgatcaagtgaaacaagaagta
gtcatgttgccacaacagagtggcagatttcagacagctagtggaaaagctgttgctgtt
tcacacaaagcgctaacaagagcacacgtcctgttaagtgacagtgaaggaacgaaggac
aaaatacacgattcattgccactttcaaagattctttccaccgatacgccaatttgcaat
agtagattttctgcagccagtggtaagcctgtagcgttttcttctgatgctctacagaag
gccaaagctttcttcagtaacatcccaactatctcagccacaaacaagagtgatgagaag
cacaatgttcaaagtaatgcagagacatgccacggtggttttaccaccgcagggggaagg
aacgtccatgtgtcagaggaaagtctcatgaaagcaaagcatcttttaggagaactcagt
gaagagtgccatcattcactcttaagctcacaagatacacaagaattaaacatttctaaa
gaaaaagatctggaaacaatttcatgttttaaggtggcaccctccaggagcagagatgtc
cttgcaaagaagcagggcccagctgaaggaaggtctttgaaccttacatcaggcacagac
tacctaagtgaagaagaagactcaaacatgtttggttttgatctaagtctgtcacgttac
agcaagagagctgaagttctaaaatcagatgagtcttcggatcggatcttaacgtctctg
aaccttacgagctgcacagaaacccagcacaagttcttggctcaggaagctttggactgc
acgaaggctctgctggaagatgaagttctagctgaccagagtttttcagatgattcaaaa
ccaatcattacaaccatagaagaagaaaagggaagaaggaaaatattaacgggagaacca
gatctcatcggtccgcctccttctaaacgaagattactggaagaatttgaccgatctgtt
gaaagtccaaaagttcttcatcctgtgaaaagttgcccagatggtttaatgaaagacagg
agagtttttaagtatagtgcctctctttgtccaaacatcacaaagccacatgggaataca
aaagtctacatggacacaaggctccaaagaactatgctgccacatcgttcaacccccgga
ggaggcagaacgtcccattccaagatgctagcctttgttccaccatttatccaaaattct
aagagagaaattcccaagatgccagagcttaaagaaaacaccagaacacctgcgtttgtt
ccgcctttcaaaaagctaaaaccttcatttcaagacagctcctctaaagaggaggaaaaa
caccaggtttcaattataatgaagtgtaacaacaacacatatacaccacctgttataaaa
tacccaaacactacaaatgttacttgttcagctgaccctgaaaaccaaaaggcgacttac
aaagacgacgttcctgtagactttgggggcttaagtcctgccggaaaggccttggatatg
aatagttcagttacccaagatgagtttcagaacattgagctggctcgggatatgcaggac
atgaggatcaggaagaagaagcaccaaaccattcgacctttgccggggagtttgtttctg
tccaagacctccggagttaccaggatcccattaaaagtagcagtaaatggaaagagccca
gcaagatgtaccccagaacagctctacaaatatggagtccaaaagctcatttctgaagtc
accagtgagactgcagaatcgtttcgtttcagtttgctgcagttcattaaatgggaaact
tttctagatggaggtggtgttcagcttgcagatggagggtgggtgatccccagaaaggat
tggacggcagggaaagaagaattttatagggcgttatgcgacactcctggtgtggatcct
aaactgatcagtgaggcgtgggtgtataatcactacaggtggattgtgtggaaacaagcc
tccatggaaaagtgctttcctgaaacaatgggcagcttctgtctcactccagagcaggtt
ctcctacaacttaagtacaggtacgatgtggaggtggaccacagtcgtaggccagctctg
aggaagatcgtggagaaggatgacacggctgtcaaaactcttgtattgtgtgtttgtgag
attgtttccaatgacctctccccaaaaaaacagagtcacaacaacaccagaacaccaaaa
agtgccgacactaagacagaaactccgtgtgcagttgttcgactcacagatggttggtac
gccattaaagcccagctggatgaacctttgaccgctatgctccacaaaggtctgctgact
gttggtgggaagctgatcatccatggggctcagctcgtgggatcacaagatgcttgttct
cctctagaggcaccggattcactcatgataaagatttttgctaatagcagcagacgagca
cgatgggatgctaaactgggatttcacagagatccacgaccattcctgcttccactttcc
agtttatacggcagtggaggaccagtaggatgtgctgatattgtgatactgagaagctac
cccattcagtggatggaaaggaaagcaggtggcgttgttttccggtcaactcgagcagaa
gagaaggaggcgagacgatacgacagtcagaaacacaaaaccatggagatgctgtttacc
aagattcaagctgattttgaaaaagaggagcaagggaatagaaaacctcagcagaagagg
aagtcaatgagccatcaagacatggcgagtcttcaggatggagaggagctgtatgaagct
tttggagatgacctggcttacctggaggcttgtttgagtgagcagcagttggaggctctt
catgcctacaggcgttccctgatggataaaaggcaggcagagttgcaggacagataccgc
cgagctttagatgcagagggcgacgaaaagggttgtcccaaaagagacgtgacacctgtc
tggaggctcagcgttgctgattcaagagtccaacacagctctgtttatcagttaaacctc
tggcgaccttcatcagatcttcagtctttactgaaagaaggttgtcgatacaaagtttac
aaccttgttgcctccgatggaaagaagcgaagcggcatagaaacagttcagctcaccggg
actaagaagacacagtttcaggatctacaggcttctcaggcttggctgtctggacatttc
caaccaagagtctctacaaactttgagactctccaaaatgcagaattccagcctctgtgt
ggagaagttgacctcacagggtacatcatcaatgttatagatgaacaaggttcatctcct
gccttttatttggccgacgggagactgaactttgtgaaagtgcgctgtttcaacagcttt
tcccaggccggtctggaggatgtggtaaaaccaggtgtcctgttgagtctgagcaacctg
cagctcagaggtcagtccttacaccccgctcccgttgtgtatgccggagatctaacggtc
ttctctacaaaccccaaagaagctcatctccaggaggccctcagccatctgaaaactgtg
atccagagtcgagaaaactttttccaaatagctgaggagaagctgtcacatttaatcaag
actgatgccacgagctctgtttcctgtccatatttgcaaccacaaaccccagtcactggc
acacacagaaaacaagacccaacgacaaacgtgacttttcagaagccagcccgaaacctc
ggatcttttacacccgtcagcaggaatcctcctgctgcaacaccgtctgaaaaagacccc
agatgtctgaagaggaaaagagctctggattatctgtctcgtatcccgtcgccaccgcct
ctctctcatctgggctcatttgcctctccatgtgtaaataaaactttcaaccctcctcga
aggtctgggacacctcgcactttacaaactgtacagactccagcacaaaaacccactgac
tctcttgtggaagatgaatgggtgaacgacgaggagctggcaatgattgatactcaggct
ctacttggtggtgatttatcgtag
DBGET
integrated database retrieval system
