Nothobranchius furzeri (turquoise killifish): 107380301
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Entry
107380301 CDS
T05163
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107380301 (npas1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107380301 (npas1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
107380301
NCBI-ProteinID:
XP_015806961
UniProt:
A0A1A8UFD7
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Position
sgr06:22805970..22873095
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AA seq
802 aa
AA seq
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MASMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFANQGDPPWSPLLEGDSNCSKVRRSAHSLA
TDMFEQHLGAHLLQSLDGFVFVVSHEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPDSASSTASTSSLAGTPEPAAPSSPHSPADESPERGF
FIRMKSTLTKRGLHVKSSGYKVIHVTGRIRYRPALVPGSTRSVRRPLGLVALAHTLPPST
LNEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFVHVEDLENIRQSH
EDLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTP
LDLLQLPESIRVERLRVSSSPTDSSPQAQGQQPAKSSVGKSDPDTKGREKFSIPAIQSED
RRKRVLRSDPEGAPPESRRRLEELRRTEEAVSASSDLASESEGDEEDETEWDEGGDSDRL
KQEDSGGGGKQSRGDTPTRGERVGRVYNGRAVIQQLKTAATPSSLPGSPNIKTEHEALAT
GGRWGSQTQTSNPHTHNSQPPSHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPAL
SPTMPVSSPQPREDRVVSRSSGVGNGPDFELLQRLAGGAAGRVLFHPLALGPQGPQSLYA
PSTIRYAPPELPPSHHHSTGHGDGLQLRSDHHKGPPPTFFPHLQRLAGLPPFSGFSPSDS
PFSSGLPFCMNGLRGAAGTEED
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatgccgtttgtcagcgaggggaaatgtgtgagcgtggaatgggatttccta
caaggacttcttgccaagcctcccaccttaccctgtctccagaaccttcgtaaagagaaa
tctcgtaatgccgctcgttctcggcgtgggaaggagaattttgagttcttcgagctggcc
aagatgctgcctttgccaggggccatcacaagccagctggacaaggcctcggtcatccga
ctgaccatcagctacctgcacatgcgcacctttgccaaccagggggacccaccgtggagc
cctctgctggagggggacagcaactgcagcaaagttcgacggtccgcccactctctggcc
actgacatgtttgagcagcacttaggagctcacctgctgcagtctctagatggctttgtg
tttgtagtcagtcatgagggacgcttcctctacatctcagagacagtttctatctacctg
gggctctcacaggtggaactgaccggcagcagtgtgtttgactacatccacccagcagac
cacgtggagatggccgagcggctggggatcaggcctcacctgcgggctgaggcaggctgc
cacacagcccccgacagcgcctccagcaccgcgtccacctcctcgcttgccggtacccca
gaacctgctgctccatctagtcctcactctccagctgatgaatctccagaacgtggtttt
ttcatacgcatgaaatccacgctcactaaacgaggtcttcatgtcaagtcctctggatat
aaggtaatccacgtgacaggacgaatccggtaccgccccgctctggtcccgggctccacg
cgctccgtccgtcgcccactgggcttggtcgctctggcacacacgctcccgccctccacg
cttaacgaagtccgcatggagagccacatgtttgtcttccgtgtgaacatggacctgcag
gtcacatactgtgagaacaggatctcagagtatatggatctgacccctgcagaggtggtg
ggacacacctgttaccacttcgttcatgtagaagacctggaaaatatccgacagagccat
gaagacttgctgaggaaaggtcaggtggtgacgggttactaccgctggctccagaggaga
ggaggctacctgtggatccagtccactgccaccgtctctatcaaccacaaagctccgcac
gaacgcaacgtcatctgggtcaactacgtcctgagtcgaaccgagctgcccgacacacct
ctggatctgctgcagctaccagagagcataagagtggagcggcttcgagttagctcgtcc
cccaccgactcctccccacaggctcaaggccaacagccagcgaagagctctgtagggaag
agtgacccagacactaaaggcagagagaaattcagcatccccgccatccaatcagaggac
aggaggaagcgcgtgctgaggtctgaccctgagggagcccctcctgagagccgccgccga
ctggaggagctccggcgcacagaagaggccgtatcagcctcctcagatctggcgagtgaa
agcgagggggatgaggaggacgagacggagtgggacgaagggggagacagcgacagatta
aagcaagaagacagtgggggaggaggtaaacagagcagaggagacaccccaactagaggg
gagagagtagggagggtgtacaacggccgagctgtgatccagcagctgaagacggcggcg
accccgtcttcgctacctggcagtcccaacatcaaaaccgaacacgaagccctggccact
ggagggcggtgggggtcccaaacgcaaacctccaacccgcacacacacaactcccagccc
ccatctcacacaccttccagcagcctgaacggcgacagccccaccaccccgatcccagac
tcctcctccagtagtgaagccccacccaaaggcttgttcacccctccctctcctgctctg
tccccgaccatgcccgtgtcctccccgcagcccagagaggacagggtggtcagtcgcagc
agcggtgtaggcaacggccccgactttgagctacttcagagactggcaggcggtgcagca
gggcgggtcctcttccaccccctcgccctcggcccgcagggccctcagagcctgtacgcc
ccgagcactatccgatacgctccgccggaactgcctccctcccaccatcacagcacgggc
cacggtgacggcctgcagctacgatcagaccaccacaagggacccccacctaccttcttc
ccccacctgcagcggctggccggcctaccacccttcagtggtttctccccgtctgacagc
cccttctcctccggcctgcctttctgtatgaacggactgaggggggctgcgggcacggag
gaggactga
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