Nothobranchius furzeri (turquoise killifish): 107380349
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Entry
107380349 CDS
T05163
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04270
Vascular smooth muscle contraction
nfu04625
C-type lectin receptor signaling pathway
nfu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107380349 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107380349 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
107380349 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107380349 (arhgef12)
Membrane trafficking [BR:
nfu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107380349 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
107380349
NCBI-ProteinID:
XP_015807044
LinkDB
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Position
sgr06:24903628..24950639
Genome browser
AA seq
1426 aa
AA seq
DB search
MSDTQPSFTDRFNKKAIRTSSILSKDHPPDKKPKSDKTSPPSNEFDPTDALVVQKSGNNS
VLAEGKPESCGLVQRCVIIQKDENGFGFTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTQSNHTEVVKLIKSGSYVALTVLGRPPGLAQIPLPEAEPDVFGVRVSSPNSPAT
ERSCSPQDRLFSPQQQYDENNSFCDQRTNVFAKFLSKEQQELQVMKKEYSRNPSPKLLKD
IQEATKHIPQLQGQLFKATGTTQEAVSGGDEDNGSISETDWTPPHKGNNCIDLLWNNTPK
SRVFEPGSPSTQSPRDSCASPKSSPKDSFNPVYSPETEDVTDLDTVSPTTVSSPLPCRLG
LQIIGAEDDYFDSDQEQTNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYA
DYYKQTNSKETRKELHNVFIDRAAILKVPIPESVSSDLNWRRMELNPEETNKQYVKTLQD
SLLSDIQKNLEDFRQKRSMGLTVAKAELTRLDQERVRDRVTIERERSYAESIISKIDDIL
FTTQTTEEDKCTTIQNVIYTYMKHLGVRVKEPRILEAKRGRKSFLPKMMQKGIKTEKEGE
DKGRKVFMLPLRRPSRIDSSPAIKALDSRPKPQKQLSQPTPVTSELMEVGPLRGSQSSDC
NDLNHSMSVTTSSPNINTHCTDVSRDVDIGGTSSGSSRLNDGLQTDLDVFPFPSSPLDVC
DQLQEDDSDRAHEGTPKATRRFEGLIAADVQSEDDQGTDSEHNPPNWHQRVGREVLVGLS
PHEIKRQEVINELFYTERAHVRMLKVLDLVFYQKLSKDAILPPTDIKNIFTNLEEVLQLH
VSILEQMTAVRKRNESSVIDQIGDDLLSWFSGGEEEKIKQAVGTFCSNQPFALEIIKTKQ
KKDSRFISFIQEAESNRLCRRLQLKDLIPVEMLRLTKYPLLLDNIVKYTDIAVEKQKVKQ
AAECCRRILSHVNQAVKESEDKQKLEDYQRRLDLSTLKQTDNPLIAELKNLDLTKRTMIH
EGSLSWKVNRDKTIELFTLLLEDILVLLQKQDERLILKCHSKNLAGAADTKHIYSPIIKL
STVLVRSVATDNRSFFVLSVSENGSHIYELMAPTVTDQNTWQSLISQRADAMKVKPHSII
PLPQPDGERDGAEIITAGTSRLGKDPDRTSTSSTQSTDKERGPASRGALQTSLPGSNPFE
EVKAEEEEEEGGFVDRVLPYQVAEIDREGDSFDVFPSRADEALKTLAALKHVLVTQLMSQ
EAAEQSKRSSGVRLLRTTSLRTPTDNRSKVLVHNGSEKSSSKTEDLAQDLGSWDTGFFES
PEDYGCLVLEGYCGPRESSTDDDILASTTGKQLNTSQVCAADSGINLRFSSTSQVGSLST
FSRQVLSHLRNLQTNLNYLKEVEAKYNNLIHQRPERSTTDKDKDKR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagcccagcttcactgacaggtttaacaagaaagcaatcagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacccaaaagtgacaaaacctcacct
ccctccaatgagtttgaccctacagacgctctggtggtgcagaagagtggcaacaacagt
gtgctagcagaggggaagcctgagtcctgtggtctagtccagcgatgtgtgatcatccag
aaagatgaaaatggctttgggttcactgtcagtggcgataaccccgtgtttgtgcagctg
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgtgacacagtccaatcacactgaagttgtgaaacttatcaaatcg
ggctcgtatgtggccctcacggttttggggcgacctccggggctcgctcagatcccgttg
cctgaggcagagcctgatgtgttcggcgttagggtatcctccccgaactctccagccacc
gaacgctcatgcagtcctcaggaccgcctcttttccccacaacaacaatatgacgagaac
aacagtttctgcgaccagaggacaaatgtctttgcaaagtttctatcaaaggagcagcag
gagctgcaggtcatgaaaaaggagtacagcaggaacccctcccccaaactactgaaagac
attcaggaagctacaaaacacattccacagctgcagggtcagctcttcaaggccactggg
acaacacaggaggctgtttccggtggtgatgaagacaatggtagcatatcagagacagat
tggacccctcctcataaaggaaacaactgcatagacctgctgtggaacaacactccaaaa
tcccgtgtattcgaacctggatctccttctacccagagtccaagagactcctgcgcgagc
cccaaaagctctcctaaagacagcttcaaccccgtctactccccagagacggaggacgtc
actgacctggacaccgtctctcccaccacggtcagcagtcctcttccctgccgccttggc
ttgcaaattataggagcagaagacgactattttgattcggaccaggagcagacaaatggc
cagtgtaacagctttaacagtattgagcagctcaagtctcgtcctgcccacctcgcagct
tttttgcatcatgtcatttctcagtttgaccctgctcctgtgttgtgctacctctatgct
gactattacaagcaaaccaactccaaagaaacaagaaaggagctccataacgtcttcata
gaccgggcagcaattttaaaagttcccattcctgaatcagtttcttctgaccttaactgg
cgacgaatggaactgaaccctgaagaaacaaacaaacagtatgttaaaacactgcaggac
tctctcctctctgacattcagaaaaacctcgaggacttcaggcagaaacgcagtatgggc
ctaacagtggctaaggctgagctgacaagactggaccaagaaagagtcagagaccgggtc
accatagagcgggagcgatcatacgcagaaagcatcatcagtaaaatagatgacatcctg
ttcactactcaaaccacagaggaagacaaatgcactacgatacagaatgttatctacaca
tacatgaagcaccttggggtgagagtcaaggaacctcgaattctggaggccaaacggggt
cggaaaagctttttacctaaaatgatgcagaaaggcataaaaactgagaaggaaggagaa
gacaaaggcagaaaagtatttatgttgcccctgcgtcggcccagccgcattgactcgtcg
ccagccattaaagccctggacagtcgtcccaagcctcagaaacagctgtctcagccgacg
cctgtgaccagcgagctaatggaagttggtccattgagaggcagccaatccagcgattgc
aatgacctcaatcactccatgtctgtcaccacctcatctccaaacatcaacacccactgc
acagatgtgagccgagacgtcgacatcggtgggacgtcatctgggtcctccagactgaac
gacggccttcagaccgacctggacgtgttcccattcccgtcttcaccactggatgtttgt
gatcagctccaggaggacgacagtgaccgagcccatgagggaactccaaaggccacaaga
agatttgaaggattgattgcagctgatgtccaaagtgaggacgatcaagggacagactct
gagcacaatcctccaaactggcatcagcgggtgggtcgagaagtcctcgtaggcctcagt
cctcatgaaatcaagcgtcaggaagttatcaacgagctgttttacactgagcgcgctcat
gtgcggatgctgaaagttttggacctcgtcttctaccaaaagctttccaaagatgcaatt
cttcctcctactgacatcaaaaatatcttcaccaacttggaggaggttctgcagctgcat
gtttcaatactggagcaaatgacagctgtccggaagagaaacgagtcttccgtcattgat
caaataggagatgacttgctctcttggttcagcggcggcgaggaggagaagatcaagcag
gcagtggggacgttttgcagcaatcagccttttgctctagagattattaaaaccaagcag
aagaaagactcgaggttcatttcattcatccaggaggctgagagtaacagactgtgtcgc
cggctgcagctcaaagacctcattcctgtagagatgctccggctcaccaagtacccgctg
ctactggacaacatcgtcaagtacacagacattgctgtggaaaagcagaaagtcaagcag
gcagcagaatgctgtagaaggatcctcagtcatgtcaaccaggctgtgaaggagtctgag
gacaaacagaaattagaagactatcagcgaagattggacctctccactctaaagcagact
gacaaccctctgatcgctgaactaaagaatctggatctaacaaagaggacgatgattcat
gagggttcactgtcgtggaaagtgaacagggacaagactattgagttgttcacactcctc
cttgaggacatcctcgttctgctgcagaaacaggatgagcgtctgatccttaagtgtcac
agcaagaacctggcaggtgctgcagataccaaacacatctacagccccatcatcaaactc
agcactgtcctcgtgcgctctgttgctacggacaacaggtcctttttcgtcctctctgtg
tctgaaaacggttcccacatctacgagctaatggcgcccactgtgacggatcagaacacg
tggcaaagtctgatctcccagagagccgatgcaatgaaagtcaagcctcacagcatcatc
ccgttacctcagcctgacggggagagagatggagcggagatcataacagctggtacttcc
cgactgggtaaagacccggaccgcacatccaccagcagcactcagtccacagataaagag
agaggtccagcctctagaggtgcattacagacttctctacctggtagtaatccttttgaa
gaagtgaaggctgaggaggaggaggaggagggtggctttgtggaccgagtgcttccttac
caagtagctgaaatcgacagagaaggagactcgtttgatgtgtttccctctcgagcagat
gaagcactgaaaacattggcagcattaaagcacgtgttggtgacccagctgatgtcccag
gaggcagcagaacaaagcaaacgctcctctggagtccgtctcctcaggactacgtccctg
cggaccccgacggacaaccgcagcaaggttctggtccacaacggctccgagaaaagtagc
tccaaaacagaagacctggctcaggacctggggtcgtgggacactggattctttgagtca
cctgaagattacggatgtttggtcctagaaggttactgcggcccacgggagagcagcaca
gatgacgacatcctggcctcaaccacagggaagcagctgaacacctcacaagtctgcgct
gccgactccggcatcaatttacgattttcctccacgtcacaggtcggcagcctctccact
ttcagcaggcaggtgctgtcgcaccttagaaatcttcagaccaacctcaactatctaaag
gaggtggaggcgaagtacaacaatctaatacaccaaaggccagagaggtcgacaacagac
aaggataaagataagagatag
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integrated database retrieval system
