Nothobranchius furzeri (turquoise killifish): 107380425
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Entry
107380425 CDS
T05163
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107380425
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107380425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
107380425
NCBI-ProteinID:
XP_015807152
UniProt:
A0A9D3BS27
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Position
sgr06:complement(29160652..29198007)
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AA seq
1009 aa
AA seq
DB search
MLFCWGDSSSGQFGPQAAFSPVSWSGPGDLTSVCCGEQHTLFLQRDGKVLSCGQNSMGQL
GRRNAKVKMLGCVEGLGDVVSLACGKNYSLALCSSGQVFGWGAGDDGQLGQPVQLSHIQR
PSRVSLPKMSIQIIQVACGNAHSMALTKGGDVFSWGLNSHGQLGQGKAVPQQFAPSLVRA
LTGVAVTQISAGGSHTLFLTLSGLVYCCGANKHGQLGLNRVDEKGRFNICVVPALRPLGV
SFISCGESHTAVLTKEGNVFTSGEGRYGQLGHSCTTDEVRPRLVEGLGGPASQIACGRHH
TLVLGSSGQLWAFGLGDKGQTGTGQGENSLSPYLVQLPWTSDSAVAPLGDLNISSGWNTN
FIYTSSAKVPEVGRIIGRLDETKLQKWLRMRRGDVETRREIEAMFLTSSSLVASFTKADG
TPLEAGALTVDQEAASRAFDQMLAVPWIRQSVKLDFLVSLLASCSRALKSPEIFMVLLSC
PLLQEDSYVMEAVALAIVICDLREKNQALLESWWSSLSAPLLTRHIMVFKNALAFTLRSN
VLATHKPGVQYLLESLKLLYRANKTGKSYKVPLSTFYVEEVATINPVEDITLWLAFCKEE
EDKIPIIFCRYPFVFPLDCKVAVFNILAFVMKEAYYELPGMGREWPEPWLLDAPEFTSGP
FFQLTVRRTHLVEDTFRQLAASDHSTFKRNLLVRLVDDHNVMIVNKRDFFLHVFDELIVP
ESDMFMHNDSRTLVWFPPKPKVEENKYFLFGVLCGLALYNHKIIHLPFPLALFKKLLRVR
TSLDDMKEFDPIMAESWRCILEDYTPDEVEALDLTFTVSWGQEEVELDPNEAGKPVTWTN
RKEFVATFVDHVFNKSVEGVFELFERGFFKVCNIDVVEFFQPEELQAVMVGQENYDWEVF
KESTVYEGEYHAYHPNILTFWEVFEKLTHEEKKKFLLFLTGCDRVPFVGMKRTIMRVAVL
PNSSERHLPESLTCHLLLLLPIYRRYPADRTMRTRLLKAINHNRGFWKE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctgttggggggacagctcctctggacaatttggtccacaggcagcctttagt
ccggtgtcctggtccggtcccggggacttaaccagtgtctgttgcggagagcaacacact
ttattcctccagagggacggaaaagtcttatcttgtggacaaaactccatgggtcagctt
ggccgaaggaatgctaaagttaagatgctcggctgtgtggaggggttgggtgacgttgtg
tccttggcttgtggtaagaactatagtctggctctgtgttcatctggacaagtgtttggt
tggggtgcaggagatgacggacagctgggacagccagtgcaactcagccacattcagaga
ccaagccgggtgtctttaccaaaaatgtccattcagatcattcaggtagcctgtggaaac
gcccattccatggcactgactaaaggaggagacgtcttctcctggggcttaaacagtcac
ggccagctgggccagggtaaggcggtgccccagcagtttgcgcccagcctggtgcgggcc
ctgaccggagtagcagtcacccagatctcagccggaggaagtcacactctgttcctcacg
ctctccggactggtgtactgctgcggggctaataagcacgggcagctagggctcaacaga
gtggatgaaaaaggcaggtttaacatctgtgtggttcctgctctcagacctctgggcgtc
tccttcataagctgtggagagtcgcacactgctgtgttaaccaaggaaggaaatgttttc
acgtctggagagggacgttacggtcagctcggtcacagctgcaccaccgatgaagtcaga
ccccgactggtggaaggtcttggaggaccagcatctcagattgcatgtgggagacatcac
actctggttttggggtcctctggtcagctgtgggcatttggcctcggggacaaaggtcag
acagggacaggacaaggagaaaacagtctgtccccctacctggttcagctcccatggact
tctgacagcgcagtggctccactaggtgacttaaacatatcatctgggtggaatacaaac
ttcatttacacttcttctgcaaaggtccctgaagttggtcggataattgggcgtcttgat
gagaccaaacttcagaaatggctgagaatgagacgcggagatgtggagacaagaagagaa
atagaagcaatgtttctcaccagctcaagtcttgtcgcgagtttcacaaaagccgatggg
actcctctggaagcaggagccttaacggtggaccaggaagctgccagtagagcctttgac
cagatgttggccgttccttggatcagacaatcagtaaaactagacttcctggtaagcctg
cttgcttcctgttcaagggccttaaagtctccagagatcttcatggttctgctcagctgc
ccccttctgcaggaggactcctatgtgatggaggctgtggctctggctatcgtcatctgc
gatctacgcgagaagaatcaagccttactcgaaagctggtggtcttctctgtcggctcct
ttgctgacgaggcacatcatggtcttcaagaatgccctggccttcacgctaagaagcaac
gttttagcaactcacaagcctggagtccaatacctgctggagagcctcaagctgctctac
agagcaaacaaaactgggaagtcctacaaagtcccactgagcaccttttacgtagaggaa
gttgctaccattaatccagtggaagacatcactctctggttggctttctgcaaagaagag
gaagacaaaatacctatcattttctgccgctaccccttcgttttccctctggactgtaag
gttgcggtgttcaacatcttagcgttcgtgatgaaggaggcctattatgaattgcccggg
atgggtcgtgagtggcccgagccgtggctccttgatgctccagagtttacatctggccca
tttttccagctgacagtgagacgaactcacttggtcgaggacaccttcaggcagctcgct
gcaagtgatcactccaccttcaaaaggaaccttttggtgaggcttgtggatgaccacaac
gtcatgattgtcaacaaaagggatttttttctccacgtgttcgatgagctgattgttcct
gagtctgacatgttcatgcacaacgacagtaggactctggtctggttcccacccaagcca
aaagtggaggagaataagtacttcctgtttggcgtgctgtgtggcctggctctgtacaac
cacaaaatcatccacctgccctttccactggctttgtttaagaagctgctccgagtcaga
acctccctggacgacatgaaggagtttgatccaataatggcagagtcttggaggtgcatt
ttggaggattacactccggatgaagtggaagccctggacctgactttcaccgtgtcctgg
ggtcaagaggaagttgaactagatccaaatgaagctggaaaacctgtcacctggacaaac
aggaaggagtttgttgctacctttgttgaccacgtcttcaacaaatcagtggagggggtg
tttgagttgttcgagagaggctttttcaaagtgtgcaacatagacgtggtggagttcttc
cagccggaggagctgcaggcagtgatggtgggccaggagaattatgactgggaggtcttc
aaagagagcaccgtgtatgaaggagagtaccacgcttaccatcccaacatcctcaccttc
tgggaggtgtttgagaaactcacacacgaggagaagaagaagttcctcttgttcctcaca
ggctgtgaccgagtgcccttcgtgggaatgaagcgcaccataatgagggtggctgtgctg
cccaactccagtgaacggcatctacctgaatccctcacctgccacttgctgttgctgctg
cccatctatcggagatacccggcagacaggacaatgcggacccgcctcctgaaggccatt
aatcacaaccgaggcttctggaaggagtag
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