Nothobranchius furzeri (turquoise killifish): 107380491
Help
Entry
107380491 CDS
T05163
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107380491 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107380491 (trip12)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107380491 (trip12)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
HECT type E3
107380491 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
107380491
NCBI-ProteinID:
XP_015807250
UniProt:
A0A1A7ZTQ3
LinkDB
All DBs
Position
sgr06:32769464..32817418
Genome browser
AA seq
2059 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRLQSEQEKHKANSPPESRRPNSKAPKAT
ASSSTGQSRGHSSKRSGLTLSVASFVLQDDPETAGTSEQEQPSHQSKSEGTRGLKRSEAP
DQISVLGPTPAKKPKSSLPPSRNNTSEAKKGPAKSRKRLVASELSASSGRSQSKKSVATG
ASPLQKRKKSDCVPSLSSATGSLPNCTEGRAAKPTKLASKSAASAKAGCSNVTDSSSSAS
SSSSSSTTGINSTATQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKSASSSKFEW
ATRFNPKVNLPKPKLSLPGSSNTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRR
STRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSTARTDEASQGASA
SSSVAGAAGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGAS
SKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNF
EIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSK
AILQAGGIADCLVYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQD
KKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRML
SLMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELM
PCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEIS
LSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDP
ELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIA
SMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKAC
SSSTTSLCTTTISNASTTSANNAAPDLGSPSFQHTMDDSLDLSPQGRLSDVLKRKRLPKR
GPRRPKYSPPRDDDKADNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTA
GVSGLARAPPKDSISNNRDKIKAWIKDQASKFVERYFNSENVDGSNPALNVLQRLCTATE
QLNIQVDGGLECLEEISIIVSESDVSSFEIQHSGLVKQLLVYLTSSSDRDLLSRDVRLKR
FLHVFTGCPVPGMEPLGRMDPTENAPYMALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSR
GSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREE
DEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEE
RESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKK
QDELWHDGVCPTVTSPLETYLTTEPPETITFDDPSLEVTLLLRVLQSISRYWFYLYENAV
CKEVIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYV
TAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDDLLKQAESVMQDLGSSR
AMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEVTLSNPKGNQEGTKYMFNS
RGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRYEMSI
SSHDLTNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTREALQMALESLNMNGCSVEDLGLD
FTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHH
LQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSFDAEQQRL
FLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEI
MREKLLIAAREGQQSFHLS
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacggcagctggaaggttgcagtcagagcaggaaaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccaca
gccagctcatccactggccagtccagagggcacagctcaaaaagaagcggtcttactctc
tctgtggcttcgtttgtattgcaagacgacccagagactgcaggaacatctgaacaggag
caaccaagtcaccagtcaaaaagtgagggcacccgagggctcaaacgaagtgaagctcca
gaccaaattagtgtccttggaccgacccctgccaagaagcccaaatcttccctcccccca
tccagaaataatacctcagaggctaagaaaggcccagctaagtccaggaagaggctagtt
gcatcagaattgtctgcatcgtcaggccgaagccagagtaagaagagtgtagccacaggg
gcctctccacttcagaaacggaagaaatcagactgtgtacccagtctaagtagcgccact
gggtccctccccaattgtaccgagggcagagctgcaaaacccaccaagctggcgtctaaa
tcagccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctctgcctcc
tcctcttcctcttcctccaccacaggcatcaacagtactgccacacagggcgcccgagtc
aaacagggaaaagatcagaccaaggcacgtcgctcccgatctgcttctagcccctcccca
cgcagaagtacacgtgacaaagagcaggccaaaagtgccagctcttcaaagtttgagtgg
gcaactcgcttcaaccccaaagtcaacttgccaaaacccaaactttccttacctggatcc
tccaatactgagacatctaaacctgggccatcaggattacaagctaaactagcaagttta
aggaagtccacaaagaagcgcagcgagtctcctccagcagagctccccagttttcggcgg
agcacacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctg
ggcaagcgcggggcagccgacgctcgccgacaggaaaaaatggctgactccgacaacaac
caagatggggccaactcgtctactgctcgaactgatgaagcatcgcaaggagcttcagct
tcaagctcagttgctggagccgctggcatgacgacctcaggagagagtgagtcagacgat
tctgaaatgggaaggcttcaagcactactggaggccagaggtctacccccacatctgttt
gggcccctgggtccccgtatgtcacaactttttcacaggaccattggaagtggagctagc
tccaaggctcagcagctgctgcagggccttcaggccactggtgatgagtctcagcagctc
caagctgctatagagatgtgtcagttactggtgatgggcaatgaggaaacactgggtgga
tttcctgtcaagagcgtggtacctgctttgatcacactgttacagatggagcataacttt
gaaattatgaaccatgcttcacgagccctcacgtacatgatggaggcccttcctcgatct
tctgccgtggttgttgatgctattcctgtcttcctggaaaaacttcaggtgatccagttc
attgatgtagcagagcaggccttgactgctttggaaatgctgtcaagacgacacagcaaa
gccattttgcaggctggtggtatagcagactgcctggtctatctggagttctttagcatc
aacgctcagaggaatgccctggccatcgcagccaactgctgccagagcatcaccccagat
gagttccactttgttgatgattctctttcactgctgactcagagactcacacaccaagat
aaaaagtctgtggaaagcacttgcctctgttttgcaagactggtagacaactttcaacat
gaagagaacctgctgcagcaggtggcatcccgggacctgctgaccaacatccagcagctg
ctggttgtgactcctcctgttctgagctccgggatgttcatcatggttgtacgcatgctt
tcgttgatgtgctccaactgtccgagcctggcggtccagcttatgaaacaaaacatagca
gaaactctccgtttcctcttgtgtggtgcctcaaacggcagctgccaggagcagattgag
ctagttcccagaagcccccaggagctctatgaactgacctccctcatatgtgagctgatg
ccctgccttcccagagagggcatctttgccgttgatgtaatgctgaaaaagggcagcgcc
caaacaacagaaggtgctatctggcagtggagggatgaccggggcctgtggcatccttac
aaccgcattgacagccgcatcattgagacggcccatcagaacggggaagatgagatcagt
ttgtcgactctgggccgtgtgtacacaattgacttcaactctatgcagcagataaatgaa
gatacaggtacagcacgtggtatccagaggaagcctaatcctcttgctaaccccaataca
gggagtcaccaagaggtccgtcgagaagatgcacgagcccagttgatgaaggaggatcct
gaactggccaagtgctttattaaaacactgtttggggtcttgtatgaggtgtacagctca
tcagctggccctgccgttcgacacaagtgccttagagccatcctcaggatcatctacttt
gctgatgcagagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcc
tccatgctctccagccaggacctgaagattgttgtaggttctctgcagatggctgaaatt
cttatgcagaagctccccgatgtcttcagtgtctatttcagaagagaaggcgtaatgcac
caggtgaagaacctcgctgagtcggagagctttcttgtcactagtcccccaaaagcctgc
tctagtagtactactagtctctgtactacgactatcagtaatgcatccacaacgtctgct
aacaatgcagctcctgacttgggctctcccagcttccagcacactatggatgactccctg
gacctcagcccacaagggcggttaagcgatgttcttaagagaaaacgacttccaaaaaga
ggacccagaagacccaaatactccccaccaagagatgacgataaagctgacaatcaggcc
aagagccctaccagtactcagtcacccaagtcatccttcctggccagcctcaatcctaaa
acctggggaaaactaggtgctcaaaccaacaacgccaactccgaaccatcacgcacagct
ggagtaagtggcctggcaagagcgcctcccaaggactcgatttcaaacaacagagacaaa
ataaaagcctggatcaaagaccaggcaagtaaatttgtggagcgttactttaactctgaa
aatgtggacggcagcaaccccgcgctgaatgtactccagagactttgcacagccactgag
cagctcaacatacaggtggatggtggtttggagtgtctagaggagatctccatcattgtg
tcagagtctgatgtgtcatcttttgagatccagcacagcggactggtgaaacagctgctg
gtctaccttacctccagctcagatagagacttgctgagtcgtgatgtgcggctgaagagg
ttcctccacgtgttcaccggctgtccggttccaggaatggagccattaggtcgtatggat
cctacagagaatgcaccttacatggcccttgtgcacaagatgaacagctgtctgagccaa
atggagcagttccctgtcaaagtgcacgacttccctagtggcaatggcaatggcagcagg
ggatctcaggctctgaagtttttcaacacacatcagctcaagtgtcagctgcagagacac
ccagactgcactaatgttaaacagtggaaaggtggccctgtgaagattgatcccctcgcc
ctggtgcaagctatcgaacgatacctcgtggtcagaggatacggacgaattagggaagag
gatgaagacagtgatgatgacggttcagatgatgaaatagacgaatccctggcagcacag
ttcctcaattctggtagcgtgcgtcacagactacagttctacataggagaccacctgcta
ccatacaacatgaccgtttaccaggctgttcgacagtacagtctccaggcagaggaggag
agagagtcaacagatgatgaggcaaatccactcggtagagctggaatctggaccaaaaca
cacacgatatggtataagcctgtgagagaagacgaggatggcagcaaagatgctgtgggt
ggaaagcgaggcagagctcagacagctcccaccaaaacctcaccacgcaacgccaagaag
caggatgagctgtggcatgatggtgtatgtcctaccgtcaccagtcccttggaaacatac
ctcactacagagccaccagagaccataacctttgatgatccttccttggaggtcaccctg
ctgctgagggtcttgcaatccatcagtagatactggttctacttatatgaaaatgccgtg
tgtaaggaagtgattcccaccacagagttcataaacagtaaattgactgccaaagccaac
cgtcagcttcaagacccactggtcatcatgacggggaacattcctacctggcttattgag
cttggaaagacctgccctttcttcttcccgtttgacacccggcagatgttgttctacgta
actgcctttgatcgagacagagccatgcagcgcttgctggatacaaaccctgagatcaac
caatcagactctcaggacagccgagttgcaccacgccttgacagaaaaaagagaacaata
aaccgcgatgacctcttaaaacaggcagagtctgtaatgcaggaccttggcagctccagg
gccatgctggagattcagtatgagaatgaggtgggtacaggtcttggtcccactcaggaa
ttttacgctctggtatcccaggagcttcagagggcagatcttggtctctggaggggcgaa
gaggttactctttccaatcctaaaggaaaccaagagggcaccaagtacatgttcaactcc
agaggactgttcgccgttccctttggtcggacaactaaaccagcacatatagccaaaatc
aagatgaagttccgtttcttaggaaagttaatggccaaagccatcatggacttcagactg
ctggatctgccgttgggacttcctttttataagtggatgctgcggtatgagatgtctata
agctctcatgacttgaccaacattgatcctggcgtggccaagtccatccagcacctagag
gacatcatccgtcagaagaagaggttggaacaagaccgatcacagactagagaagcccta
cagatggccctggagagcctgaacatgaacggctgctcagtggaggatctgggtttagac
ttcactcttccaggattcccaaacattgagttgaaaaagggtggaaaagatgtcccagtc
accatctacaaccttgaggagtacctcaggttggtggtgtactggactttgaatgaagga
gtgtcgagacagtttgagtcattcagggaagggttcgagtcagtcttccccttgcatcac
ttacagtatttctatccagaggagctggaccagttgctgtgcggcagtaaatcagagacg
tgggatgtcaagacgctgatggagtgttgtcgaccagatcatggatacacccatgacagt
cgtgccattcggttcctgttcgaggtgctgagcagcttcgatgccgagcagcagagactc
ttcctgcagtttgtcacaggaagtccaaggctgcccgttggaggtttccggagcctgaac
cctcccttgacaattgtgaggaagacatttgagtcgacggagaacccggacgacttcctc
ccttcagtcatgacctgcgtcaactacctgaagctgcctgactactccagcatagagatc
atgcgagagaaactgttgattgctgctcgcgagggccagcagtccttccacctttcctga
DBGET
integrated database retrieval system
