Nothobranchius furzeri (turquoise killifish): 107380544
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Entry
107380544 CDS
T05163
Symbol
dscam
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107380544 (dscam)
Cell adhesion molecules [BR:
nfu04515
]
Immunoglobulin superfamily
DSCAM family
107380544 (dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
fn3_2
C2-set_3
Interfer-bind
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
107380544
NCBI-ProteinID:
XP_015807328
UniProt:
A0A8C6MGC4
LinkDB
All DBs
Position
sgr06:37500309..37750469
Genome browser
AA seq
2078 aa
AA seq
DB search
MWILAFIFLQSTLNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSYNKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAFRGSVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGQRYLITSAGA
LYIVDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPAILDGFDHREVMINR
RVELPCKASGYPPPKYRWLKDNSPLEPDTRFRQTISGLLIENAQPSDSGTYVCEVWNSYG
NAEVMGRLYVKQPLKAVVSPRKVKGSVGSKVSLSCSVSGSDEYEISWYRNGEIIYPGNNV
LFNGLNRENLIIEGMAKSDGGAYQCFTRKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
SEPLFMVCNVKGTPPPRCSWSLDDDPVIKDSHHHLGHYETHDGHVASQLNVTHTQVQDGG
LYRCTCSNSAGVVYHQARINVRGRASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQVDAGEYNCKVMVQPNKMESQSVHVRVRVPPYIQP
FEFQRFTIGQRVFIPCVVTSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRINNLTP
DHNGNYTCIARNEAAVVAHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPIPLNSGSRITLLSNGSLLIKHVLVDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVISTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSQQLNQATIIDLHPSSTYNIR
MVAKNVIGNSNPSNELTITTDEAAPDGPPQDVTLEPTSPQSIKVSWKPPQKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDTTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRPPENVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIFWANLPDGELG
EIRNVTTGQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPGGVKAA
ASSSSAVFVSWLPPLKLNGIIRKYIVFCSNLHPMVIVMSEFEASPDAYFYRIPNLARNRQ
YSVWVVAVTAAGHGNNSEKIIVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPT
IKWLKGNTNGTPTPVIVDGRRSVHGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQ
VQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERS
YRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHELFTSINSTRVRLN
LAGWNNGGCPITSFILEYRAVDSSTWTTAQRTSLTKGYILYDLQEATWYELQMKVTNSAG
SGEKRITFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSILVVAVLVFIMLLV
LKRRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTM
ETIDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHP
TARRTAKAGPAAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVS
PSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTA
GTNDYTDSMTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMD
FLLNRGVPLPARGGAVSSSSGSSSSGGGGGGGAAGTSGGAAGATGETRGGGGAMGQACLE
PQRSRTLKRPPPMEPTPMEVPSPREVQQWQPGTSSTLPHREVRERGEARGEVRGEVPSSG
DLAQAQAAKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatctttctccagagcaccttgaatgttttcagtgaggatctg
cattccagtctatattttgtcaatgcatctctgcaagaggtagtatttgccagcaccaca
gggacttctgttccctgtcctgctgggggtgcaccgcctgcttcgctgcgctggtacttg
gctaccggcgaggagatctacgatgtcccgggcatccgtcacgtccaccccaatggaacc
ctccaaatcttcaacttcctgccatccagctacaacaagctgatccatgacaacacgtac
tactgcactgccgagaacccttctggcaagataagaagtcaggatgtccacatcaaagct
gtgtcgagggaaccctacacagtcagagtggctgaccagaaggctttcagaggcagtgtg
gccgtcttcaagtgcattattccagcttctgtggaggcctacgtcaccgttgtgtcatgg
gagaaggacaccgtctcactcagctcaggacaaagatatctcatcacatctgctggagcc
ttgtacatcgtggacgtcctgcccgaagatggcctaaataactaccgctgcacaacacgc
catcgctacaccggcgagactcgccagagcaacagtgcccgtctcatcgtgtcagacccc
accaatgctgagccagccatcttggatggctttgaccacagagaggtgatgatcaatcgt
cgagtggagcttccctgtaaggcttcgggctacccgccgcccaaataccgctggctgaag
gacaacagccctctggagccagacacccgctttcgccagaccatctcagggttgctgata
gagaacgcacagcccagtgactctgggacatatgtctgtgaagtgtggaacagttatggc
aacgccgaggtcatgggccgtctgtatgtgaaacagcccctgaaggccgtggtcagccct
cggaaggtgaaaggcagcgtgggcagcaaggtgtctctgtcctgcagcgtgagcggctca
gacgagtatgagatctcgtggtatcgcaacggagaaataatctaccctgggaacaacgtt
ctcttcaacgggcttaaccgggagaaccttatcatcgagggcatggcgaaaagcgatggc
ggagcttaccagtgcttcactaggaagggcaagatgtctgcacaggattttgtgcaggtt
atcctcgaagacggcactcccaaaatcctgtcctcgttcagtgagaaggtggtgaacccc
agcgagcccctcttcatggtctgcaacgtgaagggaacgccgccccccaggtgcagctgg
tcgctggacgacgatcccgtcatcaaggacagccaccaccacctgggccactacgagacc
catgatgggcatgtggccagtcagctgaatgtcacacacacccaggtgcaggacggcgga
ttgtatcggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgtataaac
gtaagaggccgcgccagcatccgcccaatgaaaaacatcaccgcgatcgctggacgggat
gccttcgttcactgccgcgtgataggctatccctactactccatcaagtggtacaagaac
tcggccctcctgccgttcaaccacaggcagcgagcatttgagaacaacggcacgctgaag
ctgagtaacgtgcagcaggtggatgctggggagtacaactgcaaggtgatggtgcagccc
aacaagatggaatctcagagcgttcatgtccgtgtgagagtccctccctacatccagccc
tttgagtttcagcgcttcaccatcggtcagcgagtcttcatcccctgtgtggtcacgtcg
ggcgaccggcctttggacatcacgtggcagaaagacggccggccgatccccatcagcctg
ggtgtgactgtcgacaacattgacttcaccagctcactgaggatcaacaacctgacacct
gaccacaacggaaactacacctgcatcgcacgcaacgaggctgcagtggtggcgcaccag
agtcagctcatcgtgagagttcctcctcagtttgtggttcagcctgaggaccaggatggg
atctatggcaaaacagtgactctcaactgctctgctgaaggctatcccccacccactatt
gtttgggaacactctaaaggtgctggcgtcccccagtttcagcccatccccctgaacagc
ggctcccgaattacgctgctgagcaacggctcgctgctcatcaaacacgtgctggtggac
gacagcggcttctacctgtgtaaggtcagcaacgatgttggagctgatgtcagcaagtcc
atgtacctcaccgtcaaaatcccagctatgatcacctcctaccccaacaccactctggcc
acgcagggcgaggagaagaggatgagctgcatcgcccacggggaaaaacccatcatggtg
cgctgggagaaagaggagcgcatcatcaaccccgagaccagccgatacgtggttactgtc
aaagaagtggctgatgaagtcatctctactctggtgatcatgccaacagttcgtgaggac
tcaggattcttctcctgtcacgccatcaactccttcggcgaggacaggggcatcatacag
ctgacagtgcaagaaccaccagatcctccagaggtggagatccgagaggttagagatcgc
accatagctctccgttggacaatggggtttgatggcaacagtcccatcactggttacgat
attgagtgcaagaacaaatcagcctcatggttatccgcccaagtgaccaaagatgtgtca
caacagctcaaccaagccactatcatcgacctccacccttcctccacgtacaacatccgc
atggttgctaagaacgttattggcaacagcaaccccagcaatgagctcaccatcaccact
gatgaagcagctcctgatggtcctccacaagatgtcaccctggagcccacctccccacag
agcatcaaagtctcctggaagcctccccagaagcacctgcagaacggcgtgatccgtgga
taccaggtgggctacagggagtacagccctggtgggagccaccagttcactatcatcagc
gtggacacgacgggagacaccacagagagcattgtcctggacaacttgaagaagtttact
cagtacagcgtggtggtccaggctgcaaacagagccggaaccggaccctcttcacagcag
gtggtcaccaagaccctggaggatgtgccgtctcgacctcctgaaaatgtcctagcagtg
gcaaagtccccagaagttatttctctctcctggatgcctctacccagagaggctctcaat
ggaaacctgcagggctacagggtcatcttctgggccaatttacctgatggagagctgggt
gaaatccgcaatgtgaccaccggccagccatccttggagctggatggtttagagaagtac
accaactacagcatccaggtgttggccttcacaaatgcaggagatggcgttcgcagcgag
cagatctacgttcgcactaaagaggatgttcctggtcctccagggggagtgaaggctgca
gcctccagcagctcggccgtcttcgtctcctggctacctccgcttaaactcaacggcatc
atcaggaaatacatcgtcttctgctcgaacctgcacccgatggtaatagtgatgagcgag
tttgaggcgtctcctgatgcatatttttacaggattccaaacttggctcgaaacagacag
tacagcgtctgggtggtggccgtgacggctgcaggtcatggcaacaacagtgagaagatc
atagtggagcctttggccaaagctccagccaggatcctgacattcaacgggaccgtcacc
actccctggatgaaggacattgttttaccctgcaaagctgtcggcgaccctcctccaacc
ataaaatggctcaagggaaatactaatggaacacctacacctgttatcgtggatggtcgc
cgtagtgtccatggaaacggcagcttcattattcgtacagtgaaagcagaggattctggg
aattacagctgtgtggccagtaacaactgggggtcagacgagatcacgctcaacctgcag
gttcaagtgcctcctgaccagccacgcctcactgttaccaagactaccaccacatcaatc
acgttgtcatggatacccggtgacaatggcgggagctccatcagaggttacatcctgcag
tactcagaggacaacagtgagcaatggggcagttttcccatcagccccagtgagcgttcg
taccgtctggagaatctgaagtgtggcacatggtacaagttcaccctgacggcccagaat
gcagtgggtccgggtcgtatcagtgagatcattgaagctaagacccatgggaaagaacct
caatttgccaaagaacatgaacttttcaccagcatcaactccacccgggtcaggctcaac
ctggctggctggaacaacggtggctgtccgatcacctcgttcatactggagtaccgagcc
gtggactcttccacctggaccaccgcccagcgcacctcgctcactaaaggctacatccta
tacgacctgcaggaggccacatggtacgagctgcagatgaaggtcaccaacagcgctggc
tcaggggagaagcggatcaccttcgccactctcaacgctgacggaagtaccatccctcca
ctgctgaaaacaggagatcccatctcagacaacatgtcaggcagtggaggtctgaaaatg
gtggtgaccatcacatccatcctggtggttgctgtgctggtttttatcatgctattggtg
ctaaagaggagaaggagggaacagaggctcaagagactccgagatgccaaaagcctggca
gaaatgctgatgagtaagaacacacggacaccggacacagtgaacaagcagcagcagaca
ctgagaatgcacatcgacatccccagagctcagctcctcatcgaggagcgggacaccatg
gaaacaatcgatgacaggtccactgtgctgttgacagacaatgactttggggagacaaac
aagcagaagtcttccacagtgacccacacagtccactaccagtctctgtcccaggccact
gggcctctggtggacgtgtccgatgccaggcctggaaccagtgagtcccaccaccatccc
actgccagacgcactgccaaagctggccctgccgcagcacggagccgctacgccagccag
tggactctgaaccggcctcaccccaccagttcctcacacaccctgaccaccgactggaga
ctccccacaccacgagccaccgggtctgtggacaaagagagtgacagctacagcgtcagc
ccctcacaggacacagatcgtgcacggagcagcatggtttcaacagagagcgcatcctcc
acctacgaggaactggccagagcctacgagcacgccaagatggaggagcagctccgccat
gccaagttcaccattaccgagtgcttcatctccgacacctcatccgaacagatgacagca
gggaccaacgactacaccgacagcatgacctccagcacgccatctgagtcgggcatctgc
cgctttactgcttccccgcccaaacctcaggatgtcagcagggtcatgaacatggccgtg
cctaaagcgcacagaccaggaggagagctagtccatttgccaccctacctccgaatggac
ttcctgttgaaccgcggagtgcctctgccagcccgaggaggggcggtcagcagcagtagt
ggcagcagcagcagtggaggtggaggaggtggtggagctgcaggaacaagcggaggagct
gctggtgctacaggggaaacgagaggaggcggaggagctatgggccaggcctgccttgaa
ccccagagaagccgcacccttaagaggccacctccaatggagcccacccccatggaagtg
ccctctcccagggaggtgcagcagtggcagccaggaacttcctccaccctccctcacaga
gaggtccgagagaggggggaggccaggggggaggtccgtggagaggtcccttcctcagga
gatttagctcaagcacaggctgccaagctcagcacctcccaggagtctctgctggactcc
agaggacacctgaaacagagcaacaacccttatgccaagtcgtacactctggtataa
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integrated database retrieval system
