Nothobranchius furzeri (turquoise killifish): 107380604
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Entry
107380604 CDS
T05163
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107380604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107380604
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107380604
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107380604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
COG5_N
ADIP
DUF7192
Orbi_VP6
Motif
Other DBs
NCBI-GeneID:
107380604
NCBI-ProteinID:
XP_015807394
UniProt:
A0A9D2YM92
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All DBs
Position
sgr01:53883950..53885912
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AA seq
341 aa
AA seq
DB search
MMAAEQDESKLSLLSLEEDLTCSICLSTFDCPVTIPCGHNFCHDCLLATWKDSYSCPQCR
TLFATKPELKKNTVLSTVVDTFKGRSSKGEALSESEPKGDLLVRCDFCMEAEAAQTCLTC
MASCEEHLRPHRENPNFRLHQLSQPVGDLMEHICPDHHKLMELFCTKHALLICSFCLQQV
HKGCSYTSLEEQRNLKETDLRAKIGLLDGKISRNKTVLSMISEVERKLQDSATTRKKAVL
AEYQHMKAMLAREECEVLKAVDREVEMGQTKIKDLMAKFTDNVDNMNKAKEEIHRLLNQT
QTLAFLQVCVHSGASAPSQLADPDYATQLVTPFIYLLKTHM
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggaacaggacgagtctaagctttctctgctgagtctagaggaggacctg
acctgcagcatctgtctcagcaccttcgactgtcccgtcaccatcccctgcggacacaac
ttctgccacgactgtctgctcgccacctggaaggactcttacagctgcccgcagtgccgg
accctgttcgccaccaagccggagttgaagaagaacacggtcctcagcaccgtggtggac
acattcaaaggcaggtcctccaagggtgaggcgctctcggagagcgaacccaaaggggac
cttctcgtccgctgcgacttctgtatggaagccgaggcggctcagacctgcctcacctgt
atggcctcctgtgaggagcacctgcggcctcaccgggagaaccccaacttccgcctccac
cagttgagtcagcccgtcggggacctgatggagcacatctgccccgaccaccacaagctg
atggagctcttctgcaccaaacacgcgcttctgatctgcagcttctgtctgcagcaggtc
cacaaaggctgcagctacacctcacttgaggagcagaggaacctgaaagagactgacttg
agagccaagataggtttactggatgggaagatttcacggaacaagacggttttatcgatg
atcagcgaagtggagagaaagctgcaggattccgccaccaccaggaagaaggctgtatta
gctgagtaccagcacatgaaggccatgttggccagagaggagtgtgaagtcctcaaagct
gtcgaccgagaggtggagatggggcagaccaaaatcaaagacctcatggctaaattcact
gacaatgtcgataacatgaacaaagctaaagaggagatccaccgtctgctgaatcagacc
caaaccctggccttcctacaggtatgtgttcactctggggcttcagcaccatcacaactc
gctgatccagattatgcaacacaattagtcacaccttttatttatcttcttaagacacac
atgtag
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