Nothobranchius furzeri (turquoise killifish): 107380687
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Entry
107380687 CDS
T05163
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107380687 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107380687 (snrpd2)
03032 DNA replication proteins [BR:
nfu03032
]
107380687 (snrpd2)
Spliceosome [BR:
nfu03041
]
Complex A
U1 snRNP components
Sm proteins
107380687 (snrpd2)
U2 snRNP components
107380687 (snrpd2)
Complex B
U1 snRNP components
107380687 (snrpd2)
U4/U6.U5 tri-snRNP components
107380687 (snrpd2)
Complex C
U2 snRNP components
107380687 (snrpd2)
DNA replication proteins [BR:
nfu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107380687 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
107380687
NCBI-ProteinID:
XP_015807477
UniProt:
A0A1A8UX23
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All DBs
Position
sgr06:complement(38313572..38318002)
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AA seq
118 aa
AA seq
DB search
MSLLTKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttgacgaagcccaaatcagagatgacaccagaagaactccagaagcgggag
gaggaggagttcaacaccggccccctgtcggtgctcacccagtcagtgaaaaacaacact
caagtcctcatcaactgccgcaacaataagaagctgcttggaagagttaaagcttttgac
aggcattgcaacatggtcttggagaatgtgaaggaaatgtggacagaagttcccaaaagt
gggaaggggaagaagaagtcgaagcctgtcaacaaagatcgctacatttctaagatgttc
ctgcggggggactccgtgatcgtcgtactgaggaaccctctgatcacaggaaaatga
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