Nothobranchius furzeri (turquoise killifish): 107380697
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Entry
107380697 CDS
T05163
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107380697 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107380697 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107380697 (g3bp1)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107380697 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
107380697 (g3bp1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107380697 (g3bp1)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107380697 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
107380697
NCBI-ProteinID:
XP_015807492
UniProt:
A0A1A8U0E6
LinkDB
All DBs
Position
sgr01:54995218..55005432
Genome browser
AA seq
492 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPVEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESEDEEPERVPSPDIAPEDSAPFYDPTPCSDPV
AQGDEEEAAAVSPEPEQETEKEVEAVEEELTADVMQETRTETHTADDQTEKSSTTPVPPT
TEPSSAPAEPAPAAPEENRPFSWASVTSKNLPPSGAVPVSGIPPHVKVAPTAQPRVETKS
ESQTTTQRPQRDQRPREQRPGGPPLAHRGPRPAREGEQGESEVRRVVRYPDAHQLFVGNV
PHDVDKSELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILGLRPIKFRGDVR
LNVEEKKTRSAREGDRRDVRPRGPGGPGGPRERVGGGGGPRGPARGGMAQKPSFGSGRGA
GPTEGRYSAPRQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acactcctgaaccaggcccccgactacctgcacaggttttacggaaagaactcctcctat
gtgcatggtggcctggacagcaacggcaaaccagtagaggcggtttatggacaatctgag
atccataaaagagtgatggctttgagtttccgagactgccacactaagatcagacatgtg
gacgctcacgctactctgaacgaaggcgtggtggtgcaggtgatgggcgagctgtctaat
aacatgcagcccatgaggaagttcatgcagaccttcgttctggcaccagagggtacggtg
gcaaataaattctacgtccacaacgacgtgtttcgttaccaagacgaggtgtttggtgac
tctgactctgagcctccagaagagtctgaggatgaggaaccggagagggtcccctcacct
gacatcgcccccgaagactccgcccccttctacgacccaaccccttgttcagacccagtg
gctcaaggtgatgaggaggaagcagctgctgtgagtccagaaccagaacaggagactgag
aaggaggttgaggctgttgaagaggagctcacggctgatgtgatgcaggagactcggaca
gaaacgcacacagctgatgatcagacagagaaaagctccaccaccccagtccctccaact
acagaaccttcctctgcacctgcagaacctgcccccgctgccccagaagagaacaggcct
ttctcctgggcatcggtcaccagtaagaacctccctcccagtggggctgtcccagtctca
ggaatccctcctcacgttaaagtcgctcccaccgctcagccacgtgtggaaacaaagtct
gagtcacagacaacaacacagagaccgcagagggaccagagaccaagagaacagagacct
ggaggtcctccgctagcccacagagggcccagaccagctcgagagggcgagcaaggcgag
tcggaggttcgaagggtggtccggtacccagatgctcatcagctttttgtgggcaatgtt
cctcatgatgtggacaagtctgaactaaaagagttctttgagcagtatgggacagtcctg
gagctgcggatcaacagtggagggaagctaccaaactttggctttgtggtgtttgatgac
tctgaacctgtacagaagattctcggccttcggcccatcaagtttagaggtgatgtccgt
ctgaatgtggaggagaagaagacccggtcggccagggagggcgacagacgagacgtgagg
ccccgtggtccgggtggccctggcggtccaagagagcgagtaggaggtggtggaggaccc
aggggtcctgctcggggtggaatggcacagaaacccagctttggctctggacggggtgct
gggcccaccgagggtcgctattctgctccacgtcagtga
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