Nothobranchius furzeri (turquoise killifish): 107380762
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Entry
107380762 CDS
T05163
Name
(RefSeq) protocadherin-12-like
KO
K16499
protocadherin delta 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107380762
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Protocadherins
107380762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
107380762
NCBI-ProteinID:
XP_015807581
UniProt:
A0A1A8B0G9
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Position
sgr01:56108892..56131106
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AA seq
1170 aa
AA seq
DB search
MKLLTLVLVQSLCLEIFSFESSSITIQYRVWEEQPIGTQVGRLVDDLRQRDEVGLLEDFH
VVEQGKALPFSVTPRDGVVSTQGRLDREELCRGSDLCEVAFSVLYRKSGVMNCLRVRVEV
MDLNDHSPSFSSDLQEVEISETAGLRMRIPLDRAIDPDAGPNGLQTYSLSVNSHFALDVS
SAPGGTKQAELVVIKELDRESQDFFDLTLVAYDKGNPPNSGSTLVRVIIQDSNDNSPTFE
DSSPSVTLSEDTDLGTTIIKLKATDPDQGANGEVKYSFSRHSRQEVQKLFHVDSQTGDVI
VKAPLDYENQSSYELIIQATDNGPNGIPAHCILHIKLTDVNDNAPRIHTTWTSPSSAVAT
VQEGAALDTYLALVTVYDADSGENGKVSASIQEGSGPFRLKQIHGDNYMIVTSGYLDREK
VMNYNITLLAQDHGTPALSSIERLPVSVLDENDNAPVFSTSLYKMSFKENNVANYKVLQV
KASDDDLTLNGKVSYSIKKPNDQKAKINYFSIHPTSGIIMVHHPLDFEESSTFSFIVTAV
DHGHPPLTGTTTVQIDLEDVNDNNPVIKEPKPRKGVVSVSVPVNAYKGEIVAELGNGTGS
GATKFPVHHSVKEGFTGFLASTIKAEDLDSGLNGNLKYLITNTNGLFWMHQSTGQLFVNI
TNATELIGRTFKMDLIVSDMGTPSLATKATIEVTFINLKDHLRNSSPGSQGQLSFTVMIA
ICLGATCLLLLLAIALVTTFCRPEKRDNRAYNCRQAESSYTRHPRRPQKNIRKSDIQLIP
VIRGRREEPLEEDSEVQALTSPPLSEDQRTEREYNFIPSSFHSQGYPNADISQHVTHYSK
TLRKPGNIELDGTLPLTPATSYQTLSKSRNPSSSSSLVSHFSTLKRNKLHPEGDKTNSPI
SASQTTLRRPKTSESRGDAEHRQMLHNLVRLSMAAFGDSIELSSASPEVQQISQLLSLLR
QGKLQPRTNFRGNKYSHRNGRYGGQDCSDWQSTKDSGHGESEAGDMDWEPGRDSLIDPQL
DEGLNNLLNHSDDVFAEVSDPAWMARLSLPLSADYHDNVFVPNSPPSTESELQPRDGLNS
TSSFSTFGKTLEKDDPLGGALLSEVSTLFEMLMTQKADAHPGPRPDVLYRLSAAYCRSLG
LDATTSSVVNTQQNSSERRLNPAPPSQFYQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgactctggttctggttcagagtctttgcttggagattttctcctttgag
tcatcttcgataactattcagtatcgtgtttgggaggagcagcccataggaacacaggtc
ggccgtctggtggacgaccttcgccagagggatgaagttggtcttctggaggatttccac
gtggtggagcagggaaaggcccttcctttttctgtaaccccccgggatggggttgtctcc
acccagggccggctcgacagggaggagctgtgccgtggatcggacctgtgtgaggtagcc
ttcagcgtcctctacaggaaaagtggagtgatgaactgcttgagagttcgtgtggaggtg
atggacctgaatgatcacagccccagcttctccagtgatctacaggaagtggagatctca
gagactgccggccttcggatgagaatccctttagaccgagcaattgatcctgatgcagga
cccaatggcctccagacctactctctgtcggtcaactcacactttgctttagatgtgtca
tctgctccaggagggacaaaacaggcagagcttgtggtaatcaaagaactagacagagag
tctcaagacttctttgacctcaccttggtggcatacgataaaggaaatccaccaaattct
gggagtacattagttcgggttataatccaagactctaatgacaatagtccaacttttgaa
gacagcagtccctctgtcacactaagtgaggatacagaccttggaacaactatcatcaag
ctaaaagccactgacccggaccaaggtgccaatggagaggtgaagtactcattcagtagg
cactctcgccaagaggttcaaaaactcttccatgtagattcccaaactggagacgtgatt
gtaaaggctcccctggattatgaaaaccagtcatcgtatgagttaatcatacaggccact
gacaatggtcccaatgggatcccagctcactgtatactgcatattaaactcacagatgtt
aatgataacgcaccaaggattcacaccacctggacctcaccttcctcagctgttgctacc
gtgcaggaaggagctgcattagacacttatcttgctctagtgacagtttacgatgcagat
tctggagaaaatggaaaagtgagtgcatccattcaggaaggatctggccctttccgcctg
aaacagatccatggtgacaattacatgattgttaccagtgggtacttggatcgagagaag
gttatgaactataatatcacacttcttgctcaggatcacggaactcctgctttgtcctcc
attgaacgtttgcctgtttctgttctggatgaaaatgataacgcccccgtgttttctacc
tccctttataaaatgtcctttaaagaaaacaatgttgctaactacaaagttctccaagtt
aaagccagtgatgatgacttgacactgaatggaaaagtgtcctactccatcaaaaaacca
aatgatcagaaggcaaaaataaattatttttccattcacccaacatctggaatcataatg
gtccaccaccctttggactttgaagaatctagcaccttctctttcattgtcacagctgtg
gaccatggacatccaccacttacaggtacaaccactgtgcagattgaccttgaggatgta
aatgacaacaacccagtcatcaaagagccaaaaccaaggaaaggggttgtttctgtaagt
gtaccagtcaatgcatacaaaggggaaatcgtggctgaacttgggaatggcacaggaagt
ggagcaaccaagtttccagttcatcactcagtcaaagaaggattcactggatttcttgca
tcgacaataaaagctgaggatctagattcaggactcaatggaaacctgaagtacctcatc
actaacacaaatggcctcttctggatgcatcagtctacaggccagctatttgtcaatatc
accaatgccactgagctcattgggagaacattcaaaatggaccttattgtgtctgacatg
ggcactcccagtttggccactaaagcaactatagaggtgactttcattaacctcaaggac
cacctcaggaactcatcccctggaagccaagggcagctcagcttcactgtgatgattgca
atttgcctaggtgctacatgcctgctccttctgctggccattgctttggtgacaacattt
tgccgccctgagaaacgggacaatcgagcttacaactgcagacaggctgaatccagctac
acccgccacccccgacggccacagaaaaacataagaaaatctgacatccagttaattccc
gtcatccgagggcgaagagaggagccacttgaggaggacagtgaggtccaggcgctgact
tcacctccactttcagaagatcaaagaacagagagggagtacaacttcataccatcaagc
ttccattcccaaggctacccaaatgcggacatctctcaacatgtcacccactatagtaaa
acactcaggaaacccggaaacatagaactagatggcactttgcctttgacaccagccaca
tcatatcagactttgagcaaatccagaaatccttcatcatcatcctctttagtctcacat
ttcagcactttgaagcggaataaactgcaccctgaaggtgacaagacaaattcaccaatc
tcagcatctcagacaactttaaggaggccaaagacatcagaaagtcgaggagatgcagaa
catagacaaatgcttcacaacttggttcgtctctccatggctgcatttggagactccatt
gagctttcctcagcttctccagaagtacagcagatctcccagctcctctccctcctccga
cagggtaagctgcagccaaggacaaacttccgtggaaacaagtactcccaccgtaacggc
agatatggaggccaggactgctcggactggcagagcaccaaagacagtggacacggtgag
agtgaggccggagacatggactgggaacctggccgagactcactcatagatccacaactg
gatgaggggctcaacaacctgctaaaccactcagatgatgtttttgctgaggtcagcgac
cctgcctggatggccagactctctcttcctctctccgctgattaccacgacaacgttttt
gtccccaacagccctccgtccactgaaagcgagctccaaccacgcgatggcctaaattct
acctcctctttctccacctttggtaagactctggagaaggacgacccactgggtggagcc
ctgctgtctgaggtcagcaccctgtttgagatgctgatgactcagaaggccgatgcccac
ccgggccctcgacccgatgttctgtacagactgtcagcagcgtactgccgctccctggga
ctggatgccaccacgtcatcagtagttaacacccaacagaacagttctgaaaggaggctg
aacccagcaccgccatcacagttttatcagtag
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