Nothobranchius furzeri (turquoise killifish): 107380900
Help
Entry
107380900 CDS
T05163
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04210
Apoptosis
nfu04218
Cellular senescence
nfu04620
Toll-like receptor signaling pathway
nfu04621
NOD-like receptor signaling pathway
nfu04622
RIG-I-like receptor signaling pathway
nfu04623
Cytosolic DNA-sensing pathway
nfu04625
C-type lectin receptor signaling pathway
nfu04920
Adipocytokine signaling pathway
nfu05132
Salmonella infection
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107380900 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107380900 (nfkb1)
04218 Cellular senescence
107380900 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107380900 (nfkb1)
04621 NOD-like receptor signaling pathway
107380900 (nfkb1)
04622 RIG-I-like receptor signaling pathway
107380900 (nfkb1)
04623 Cytosolic DNA-sensing pathway
107380900 (nfkb1)
04625 C-type lectin receptor signaling pathway
107380900 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
107380900 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107380900 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
107380900 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107380900 (nfkb1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107380900 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
107380900
NCBI-ProteinID:
XP_015807780
UniProt:
A0A8C6KBX0
LinkDB
All DBs
Position
sgr01:59270809..59320207
Genome browser
AA seq
919 aa
AA seq
DB search
MAGDDPFLHPSNQIFDNVMMMDPSWEFPPFSAIPQMASLRTVDGPFLQILEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNRKTYPAVKICNYQGKARVVVQLVTALTPMPQLHAHSLVGK
LCDKGICIAEMQSKDSSISFPNLGILHVTKKNVAKTLEERMVEAFRMGYSCGVAIHPEID
VLQGEVRIPRELSDHQRNIISIAAANQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVS
EPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDESGLTWEA
LGDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQVIDK
EEVQRKRQKTLPNFQDFSGHGGGGGGGGGGLYRGGGGPATGGGYFQGFASYSYGGGGGGG
GGFSTGYSAGLGGGGGTKHASDSDTAADDNDSDDDSSGDRPRAPAMPGGLEEGESEEERV
RMEHEADREDQLVDVTCRQLDALFHYSVTGDSAYLLAPQRPLMAAQDEDGDTGLHLAVLH
SQQDALMSLTQVVSALPGEEVLNMRNHLYQTPLHLAVITQQKEAVEALLLAGADPTLTDR
HGNTVLHLAAQQEGGGMVGFLLRRRELRELLQCCNSAGMCAIHLAVLANQLSSLRELLEG
GADVEAQERSCGRTALHLATEMDNVSLAGCLLLEGNAIVDCCTFNGSTPLHVATGRGSIK
LTALLMAAGADPQKENFEPLFFREEVEDEEGGCNEADEGYIPGTTPLSMATNPQVLDLLK
GKDYEPKSPHHVFIPPQGDLASLDMKVKQAVCSAVESEGCWENLAHSLGLGILNMAFRLS
PCPTKTLLDSYEVSGGTIMDLLAALRSVGGCKALSIMEEALCCSQEPSGEPTHTPAVELK
VDVRIDSGVCDSGVELSTA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagacgaccccttccttcatccatccaaccagatatttgacaacgtgatgatg
atggatccatcctgggagttcccacccttttctgcaatacctcagatggcatctctacgg
acagttgatgggccgttcctgcagatcctggagcagccgaaacagcgcggcttcagattc
cggtacgggtgtgaaggtccatcccacggcggccttccaggagcctccagtgagaagaac
aggaagacctaccccgcagtgaagatctgtaattaccagggtaaggcccgggtggtggtc
cagctggtgacggctctgacccccatgcctcagcttcatgctcacagcctggtggggaaa
ctgtgtgacaaaggcatctgcatcgcagaaatgcagtccaaagactccagcatcagtttt
cccaacctggggatcctccatgtgaccaagaagaacgtggcaaagactttggaggagagg
atggtggaagccttcaggatggggtacagctgtggggtcgccatccaccctgagatcgac
gtgctgcagggggaggtccgaatcccacgagaactctcagaccaccagcgcaacatcatc
agcatagcagcagccaatcaggccaaagagatggacctcagcgtggttcggctcatgttc
accgccttcctccccgacagcgatggaggcttctccaggcggctcgagccggtggtgtca
gaaccaatctacgacagcaaggctccgaatgcgtccaatctgaagattgtgcggatggat
cggactgctggctgtgtgactggaggcgaggaagtctacctgctctgtgacaaagtccag
aaagatgatatccaggtgcggttttatgaggaggatgaatcggggctgacctgggaagct
ctgggagatttctcccccacagatgtccacagacagtttgccatcgtcttcaagactccg
aagtatcgagaccagaacctgcagaagccaacatcggtgttcgtccagctgaagaggaaa
tctgacaacgaaacaagcgagcctaaaccctttacttaccaccctcaggtcatagacaag
gaagaggtacagaggaaaaggcagaagacattgccaaacttccaggacttcagtggtcac
ggaggaggaggtggtggaggaggaggagggctgtaccgaggaggaggaggtcctgcaaca
ggaggaggatattttcagggctttgcctcttatagctatgggggagggggaggaggagga
ggaggtttctccactggatactcagctggtctgggaggaggaggaggcaccaagcatgct
tctgacagcgacactgcagccgacgacaatgattcagacgatgactcgtcaggggacaga
ccgagagctccagccatgcctggagggctggaggagggggagagtgaggaggagagagtc
agaatggagcacgaagcagacagagaggatcagctggttgacgtgacctgcaggcagctg
gatgcgctctttcactactctgtcacaggtgattcagcttacctgctggctccgcagcgc
cccctgatggcagcacaggacgaggacggagacactgggctgcacctggctgttctacac
agccagcaggatgcgctgatgagtctgacgcaggtggtgtctgctctgcctggagaggag
gtgctcaatatgaggaatcacctgtaccagactcctttgcacctggcggtgattactcag
cagaaggaggcagtggaggccctgctactggctggtgctgacccgactcttacagatcgc
catggcaacacagtgctgcacctggcagctcagcaggaaggaggcggcatggtggggttc
ttactgagacgcagagagttaagagagctgctgcagtgctgcaactctgcaggtatgtgt
gccatacacctggcagttctggccaatcagctttcctctctcagagagctgctggagggt
ggtgctgatgtggaggctcaggagcgtagttgtggacggactgccctccaccttgccaca
gagatggataacgtgtcgctggccggctgcctgctgctggagggaaacgccatagtggac
tgctgcacctttaatggctccacccctctccatgtggccacggggcggggctccatcaag
ctgacggctctcctgatggctgcaggcgcggacccacagaaggagaactttgagccactg
ttcttcagagaggaggtggaggacgaggagggaggctgtaatgaagctgatgaaggttac
atcccaggaacaactcctctcagcatggccaccaacccccaggtgttggatcttctcaag
ggcaaggattacgaaccaaagtctcctcatcatgtcttcatccctcctcaaggtgacctg
gccagcctggacatgaaggtaaagcaggcggtgtgcagcgcagtggagagtgaaggatgc
tgggagaatctggctcacagtctgggtcttggaatcctgaacatggccttcagactgagc
ccctgccccaccaagaccttgctggacagctacgaggtttcaggtggcaccattatggat
ctgcttgctgctctcagatcagtgggtgggtgcaaagctctgagtatcatggaggaggca
ctgtgttgcagccaggaaccgagtggggagcctacacacactccggctgtggagctgaag
gtggacgttcgtattgacagtggggtctgtgacagcggggtggagctttccacggcgtag
DBGET
integrated database retrieval system
