Nothobranchius furzeri (turquoise killifish): 107380912
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Entry
107380912 CDS
T05163
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04136
Autophagy - other
nfu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107380912 (atg13)
04136 Autophagy - other
107380912 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107380912 (atg13)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107380912 (atg13)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107380912 (atg13)
Atg1 complex
107380912 (atg13)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107380912 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107380912
NCBI-ProteinID:
XP_015807805
UniProt:
A0A1A8ASK3
LinkDB
All DBs
Position
sgr06:48696125..48703273
Genome browser
AA seq
530 aa
AA seq
DB search
MDGDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAIARVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVSTPV
GTVTLSCAYRTNLAFMSSRQFEKAPIMGIIVDHFVDPPGTNQRAANMGQPCNYRAPDEDE
GMFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLPLPMAPGLVTHNLYA
SRLSYQPAALGGAAEFCHPATNANQAGREGGVLVPAQPPHGADAHLTVEHAPNTPSSSGD
EDGLLQSGEGRGSVSPSDPMESLTAFTRKVGAFVNKPSTQITAGSLDLPFAAFAPRGLDS
EDNDPMVRPPDSPQSQSPLQASLHSHCSDGSGQQDDFVMVDFRPAFSKDDLLPMDLGTFY
REFQNPPQLASLSLNTSSQSMADDLDSLPEKLRVYEKNMDEFDAFVDMLQ
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacctgagtccacaggataaaaaagacttggacaaattcatcaagttcttt
gcgttaaagactgtccaggtgatagtccaagcccgccttggagagaagatctgcactcgc
tcttcttcatctcccactggctctgattggtttaatttggccatcaaagacatcccagag
gtgacccatgaagccaagaaggcgctggccggtcagcttccaggcatcggtcggtccatg
tgtgtggagatctctttgaaaacgtcagagggcgactcaatggagttagaaacgtggtgc
ctggagatgaatgaaaagtgcgataaggacatcaaggtgtcgtacacagtctacaaccgt
ctgtctgtcctcctgaagtctctgctggccatcgccagggtaacacctgcctacaaactg
tccagaaagcaggggcatgactacgttatactgtacaggatctactttggagaagtccag
ctgggtggattaggagaaggtttccagacggtacgggtcggagttgtcagcacgcccgtt
ggcaccgtcacgctctcgtgcgcttaccgcaccaacctggcgttcatgtctagcaggcag
tttgaaaaggctccgatcatggggatcatcgtggatcactttgtggatcctcctggaacg
aaccagcgggcagccaacatgggacagccctgcaactacagagcaccagatgaagatgaa
ggcatgtttgcaggagttcaggactcacaggaagtctgcaccacctccttctccacctct
cccccctctcagtgtgtgtgtactctcagtccgtctccctctaaactgtccaagcccctc
cccctggacagtctgccgctcccaatggctcctggacttgtaactcacaatctctatgcc
tccaggctatcctaccagcctgcagcgttaggaggagcagcggagttctgccatcctgcc
accaacgccaaccaggctgggagagaaggaggagttctggttcctgctcagcctcctcac
ggcgctgacgcccacctgacggtagaacacgcccccaacacgcccagcagcagcggcgat
gaagacggcctgctgcagagcggggaggggagggggagcgtgtctccatctgacccgatg
gagtctctcaccgccttcaccaggaaggtcggagcctttgtgaataaacccagcacacag
ataacagcaggaagtctggacctcccctttgctgcgttcgctcctcgaggcctggactct
gaggacaacgatcccatggtccgtcctccagactccccccagagccagtcgcccctgcag
gccagcctccactctcactgctccgatggatcggggcagcaggacgactttgtcatggtc
gactttcgcccagccttctctaaggacgacttgctgccgatggatctggggacgttctac
agggagttccagaaccctccacagttggccagtctgtctctgaacaccagctcccagtcc
atggccgatgacctggactcgctgccggagaaactgcgcgtctacgagaagaacatggac
gagtttgacgcctttgtggacatgctgcagtag
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