Nothobranchius furzeri (turquoise killifish): 107381002
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Entry
107381002 CDS
T05163
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107381002 (tbc1d2)
Membrane trafficking [BR:
nfu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107381002 (tbc1d2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
Fez1
PH_3
Motif
Other DBs
NCBI-GeneID:
107381002
NCBI-ProteinID:
XP_015807938
UniProt:
A0A1A7Z852
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Position
sgr01:59982812..60001481
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AA seq
1110 aa
AA seq
DB search
MEGSAAAGSPGTDPPASFPIHSDKEELLQASEDHQSRQSVGLSGSQNHHIPAETPELSDN
LKAECPKEESNPGQPGSENTGRDKPELTKLVPVCEGSLLTEKPPAPNDQPKLDQSKKEDP
SGPPPEHVPGPSQDPQDQKCICAEDQEAEASPLPLLSENLPERKEELESESKQNHQDPQR
PQDLHSPAPHLNRLQQIPPPPSPFPPAEQLDHPSPLTIEAFCEQAWPRPPSVSGEPKLCG
YLQKQGGPLRVWKQRWFAYDEKKNQLLYHRTPQDVMPLGRVELSRATFTYPLKAERGTFH
IKTPERTFVLKAVTEEVMLYWLQQLQGKRWRHRQTSICSEHTNNKNTADDFLTPLKSPLG
LVGKEAAVAPTQRTPFADMSIKHPLIEFQNSVHSLRKRTSQDVSQSIFHVDITEWTINSP
AEDSISSGTPPETPPPPLPLADPAGEISLPDSRGLPSTLDIGSRGTKSRSSATLPVRLRD
TMSSSSERASRLQQEKKMLMEEVKSQKELVWILHKALEASQLEKRTCSEFLAAGDEQERL
ELLRHRERQAADLRRRLEEANMEVEGLKKSLAERDTQLSELQENIKKLMEKNQAKQQVII
KLSDHMTSCLFEPQHPDSSSDGPQNSQSIRQLQQQIENLKDDMEAYKTQNKFLNSEIYQL
TRLWQKSSEQEKNLMVKCAYLEAANCQVESRYLGVLRKLQETKALDLEQLGAVQKMIEDA
LRGELKRDIKLSSDRDHDEYGFKIIPDYEVEDMKLLAKIQSLEIRCFNLLNQEGPERPLL
ARWAEYLASRFDGNLSPSPELKALIRAGVPKEHRQRVWCWLVRTRTRTIWERYPHHYQQL
CEKSRTSPHPASRQIQLDLHRTLTTNQNFSSPSSPALHQLHRILLAFSWHNLAVGYCQGL
NRLAAVALLILQNEEDAFWSLVAVVEAIMPQDYYTKNLIASQADQRVLKDFLAEKLPRLA
AHFETYGIDVSLVTFNWFMVVFVESLPSDLLLPLWDAFLYEGTKVIFRYALALFKYKEDD
ILKIHDSTEIYQFLRFFTKTISDSRKLMNIAFNDMNPFPLRLLRNRRALHLERLQGELRE
LEKQQKEFLTESAEHRDKDLDMVVSEDDDF
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagtgcagcagcaggaagtcctggtactgacccgcctgcctcatttcctatc
cactctgacaaggaggaactgctccaagcctcggaggaccatcagagccgacagtctgtt
ggcctgtctgggtcccagaaccaccacattccagcagagacaccagagctgtccgacaac
ctgaaagcagaatgtccaaaagaggagtcaaatccaggtcagccaggctcagaaaacacc
ggtcgagataaaccagaacttactaaactagttcctgtttgtgaaggttctcttctgaca
gaaaagcctcctgctccaaacgatcaacctaaactggatcaatcaaagaaagaagatcct
tctggaccaccacctgaacatgtacctggtccctctcaggatccccaagaccagaagtgt
atttgtgctgaagaccaggaagctgaagcctctcctcttccacttctttctgagaatcta
cctgaaaggaaagaggagctggagtctgaaagcaagcagaaccaccaggatccacaaaga
cctcaggacctccacagcccagctcctcacctgaacagactccaacagattcctccccct
ccctcaccttttccacctgcagagcagcttgaccacccatctcctctcactattgaggcc
ttctgtgagcaggcgtggccccgccctccttcggtttcaggtgagcccaagctttgtggc
tacctgcagaagcagggagggcctctgagggtctggaagcagcgctggttcgcctatgat
gagaagaagaaccagctgctttaccatcgcacaccacaggatgtgatgccacttggacgg
gtggagctgagtcgcgccacattcacttacccactgaaggctgagcggggcaccttccac
atcaagacgcctgaacgcacttttgttctcaaggctgtgactgaggaagtaatgctctac
tggttgcagcagctacaggggaagcgctggcggcacagacagacctccatctgttcagag
cacacaaacaacaaaaacacagctgatgacttcctgacccctctaaagagtcctctgggt
ctggtggggaaggaggcagccgtcgcaccgacacaaagaacgcctttcgctgacatgtct
atcaaacacccgctgatcgagttccaaaactctgtccacagtctgaggaagagaacctct
caggacgtcagtcagagcatctttcatgtagacataacagagtggaccatcaacagcccc
gcggaggacagcatttcatcaggaactccccctgagacccctccccctcctctcccattg
gctgatccagcaggtgagatatctttgcctgacagcagagggttgccatcaacgctggac
attggcagcaggggcacaaagtctcgcagctcggccaccttgccagtccgtctcagagac
acgatgtcttcatcttcagagcgggcatctcgtctgcagcaggagaaaaagatgctgatg
gaggaggtgaaatctcagaaggagctggtttggatcctccacaaagcgttggaggcatcc
cagcttgagaagagaacctgttctgagtttctggcagcaggtgatgagcaggagcgtctg
gagcttctgcggcaccgcgagcgtcaggcggccgacctgcgacgccggctagaagaggcc
aatatggaggtggaaggcctgaagaagagtctggctgagagggatacacagctgtccgag
ctgcaggagaacatcaagaagctaatggagaagaaccaggccaagcagcaggttatcata
aagctgtctgatcacatgacttcctgtctgtttgaaccacaacaccctgattcgtcctct
gatgggcctcagaactcccagagtatcagacagcttcaacaacagatagagaacctgaag
gatgacatggaggcatataagacccagaacaagtttctgaactctgagatttatcagctg
accagactgtggcaaaagagctcagagcaggagaagaacctcatggtgaagtgtgcttac
ctggaggctgccaactgtcaggtggagagccgttacctgggagttctgcggaagctgcag
gagaccaaggcattagatctggagcagctgggggctgttcagaagatgattgaggatgct
ttgagaggagagctgaagcgcgatatcaagctcagctcagacagagatcacgatgagtac
ggttttaagattatcccagactacgaggtagaggacatgaagctgctggcaaagatccag
tccctggagatccgctgcttcaacttgttgaaccaggaaggaccagagcgccccctgctg
gctcggtgggcagagtacctggctagcaggttcgatggcaacctgagtccatcacctgag
ctcaaagctctgatacgagcaggtgtcccaaaagaacaccgacagagggtgtggtgctgg
ctggtccgaacaagaaccaggactatctgggagcgctaccctcatcactaccagcagctg
tgtgagaagagccggacatcaccccatcctgcatctcgacagatccagctggaccttcat
cgcaccctaacgacaaatcagaacttctcgtcaccatctagtcctgccctccatcaactt
catcgcatcctgttggcattctcctggcacaacctggctgttggctactgccagggactc
aacagattagctgcggttgcgctgctcatcctgcagaacgaagaggatgccttctggtca
ctggtagccgtggtggaagccatcatgcctcaggactactacaccaagaatctgattgcc
tcgcaggcagaccagcgtgtgctgaaggacttcctggcagagaaactcccccggctggca
gctcactttgagacttacggcatcgatgtgtctctcgtcaccttcaactggtttatggtg
gtttttgtggagagtctgcccagtgacctcctgctgccgttgtgggatgcctttttatac
gagggcaccaaggtgatcttcagatacgctctggctctgttcaaatacaaagaggatgac
atcttgaagatccatgacagcacagagatctaccagttccttcgcttcttcaccaagacc
atctcagacagcaggaagctgatgaatatcgccttcaacgacatgaacccttttcctctt
cgcctgctgaggaatcgccgtgcactgcacctggaacgcctgcagggagagctacgagag
ctggagaagcagcagaaggagttcctcacagagagtgctgagcatagggacaaagacctg
gacatggttgtcagcgaggatgatgacttttga
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