Nothobranchius furzeri (turquoise killifish): 107381037
Help
Entry
107381037 CDS
T05163
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu02010
ABC transporters
nfu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107381037
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107381037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107381037
Transporters [BR:
nfu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107381037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
107381037
NCBI-ProteinID:
XP_015808008
UniProt:
A0A1A8A091
LinkDB
All DBs
Position
sgr01:60034432..60074695
Genome browser
AA seq
2292 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILITVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRNPTPGESPGIVGNFNDSIISRLFSDAKKILLYSQNDK
NLEGFKDLARALEAMQTSRSGFKLKHFLRNNETLSSFLRRNASLPEHSVQQIREADVNLD
KVLLRGFGVHLRNMCPRKGGKQNVSDFVMISDQQVASQVQDILCEAPPTWLNRAEENFMS
NLDFFQPIRRDMGSDPEAIQQVAKAANNLLDSLGSLAVELAGMKSWVDLRNEIIFLTRNA
TSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEAAAHYDNSST
PFCNSLVRSMDSNPMSRMIWEALKPLLLGKILYTPHTPATQRIIHEVNRTFQELGVFRDL
GGMWEEMRPKVWDFMENSEQLDLVRTLLRNNVSASFFHTRLASTDWTVSDVSNFLSNQPS
ERLGGALTWREVFNETDQAIMSISRFMECVNLDKLEPALSEERLINQSMLLLEDRKFWAG
IVFSNITPNATELPPKVNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFLY
LQDVIEQGIIRAMTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVSII
LKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLVLKMGNLLPYSDP
GIIFLFLGSYAVVTIMQCFLISTVFSRANLAAACGGIIYFTLYLPYVLCVAWQDYISYGA
KVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLQEDEFSLRTTIIVMYFDSFLY
GVLTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEDGKSSNIPLRRKGNASAVCVEEEPTHL
KPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRTDLSTIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKSEIEHI
LQDTGLPHKRRSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRQGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKGPE
PSLSSCRNSSSTVSFTKKDEDSTSVSSSDAGLGSDHESEAAPIENGLAASVCPSSFVPPY
ASLASALILRHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFRDLDLKLQELGISSYGV
SDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRRRRTHAFGGGDHQSCLRPTSEDEDDGNE
SEGDADCRESDWLNRTDGKGSYQMSGWSLKRQQFVALMWKRFLYARRSRKGFFAQIVLPA
VFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFLSDDAPGDANMQKLLNALMDPPGLG
TRCMDGYSIPEAPCTMGDEDWHTPDVPMSVQEMFSFRNWTMENPSPACFCTCDGKKRMLP
ECPAGAGGLPPPEIKLSATDALQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGF
SLGARSTQVLPPANEVDDAIERVRKIFELQEGAAADRFLDNLSGFINGLDTKNNVKIWFN
NKGWHSAAAFINVMSNSILRANLPTGSEPSSYGISAFNHPLNLTKEQLSQVALVTTSVDV
LVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVHPLLYWVANFMWDMCNYFVPAT
LVILIFICFQQKAYVSSSNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSINI
LIGINGSISTFVMELFGDHEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERF
GENRFRSPLEWDMVGKNLLAMAVEGVVFFIITILIQYRFCIKPRPVSTLTKLGALGEEDE
DVARERHRIVQGLGQGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKT
TTFKMLTGDTMVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINELLTGREHLELYAIL
RGVPEKEVCDVAEWGIRKLSLLKYADKRAGSYSGGNLRKLSTAISLIGAPPVVFLDEPTT
GMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKN
RFGDGYTIILRVAGPDPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLAHIFSI
LAENKDILRIEDYSVTQTTLDQVFVNFAKDQSDDYVSKDASVRRKDVSIDVAALSSTCAA
AEGGGGQQESIM
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctccactcagctgggcctcctgctgtggaagaacttcacctacagacgacgg
cagacgctccagctcttggtggaaatcgtctggccgctcttcatcttcttcatcctcatc
actgtgcgactaaactaccccccatacgagcagcatgagtgtcatttccccaacaaggcg
atgccatcggctggaacactgccctggattcagggaatcctctgcaatgccaacaacccc
tgcttcaggaacccaacgccgggcgagtctccgggcatcgtcggcaacttcaacgactcc
ataatctctcgtcttttctccgatgccaagaagatcctcctgtacagccagaatgacaag
aacctcgagggcttcaaggaccttgctcgagccctggaggccatgcagaccagccgctca
ggattcaagttgaagcatttcctgagaaacaatgagactctctcgagctttctgcgaagg
aacgcctctctgcctgaacacagcgtccagcagatcagagaggctgatgtcaacctggac
aaggtcctcctcagagggtttggcgtccatctaagaaacatgtgccccaggaaggggggc
aaacagaatgtgtcagactttgtgatgatctcagatcagcaggttgcatcgcaggtgcag
gatatcctgtgcgaggctccgcccacctggctgaaccgagctgaggagaacttcatgagc
aacctggacttcttccagcccatccggagggatatggggtcggatcccgaagccatccaa
caggtcgcaaaggcagccaataatcttctggacagtcttggttctctagccgttgagctt
gctgggatgaagagctgggtggatctgaggaatgagatcatcttcctgacccggaacgcc
acctcgtcacccagcgccatgtaccaggcagtctccaggatcgtgtgcggtcaccctgag
ggtggcggtctgcagatcaagtctctgaactggtacgaggacagcaactacaaggctttg
tttggtaatcacaacagcagcgaggacgaggcagcggcgcactacgacaactcctccact
cctttctgtaacagcctggtaaggagcatggactcaaacccaatgtcccggatgatctgg
gaggctctgaaacctctgctgctggggaagatcctgtacactcctcacacgcctgccaca
cagaggatcatccatgaggtgaaccggaccttccaggaactcggagtgttcagggacttg
ggcggcatgtgggaggagatgagacccaaagtctgggacttcatggaaaacagcgagcag
ttggacctggtcaggactctgttgaggaacaatgtcagtgccagcttcttccacactcgg
ctggccagcactgattggacggtgtcggacgtgtcgaacttcctgtccaaccagccgtca
gagcgtctcggcggagctctcacctggagggaggtgtttaatgagacagaccaggccatc
atgagcatctcccgcttcatggagtgtgtgaacctggacaaactggagcctgccctcagt
gaagagcgcctaattaatcaatccatgctgttactggaggacaggaagttctgggcgggg
atcgtgttttccaacattactcccaacgccaccgagctgccgcctaaagtcaactacaag
atccgcatggacattgacaatgtggagaggaccaataagatcaaggacgcgtactgggat
ccaggtcctcgtgccgacccctttgaggacatgcgttacatctggggtgggtttttatac
ctgcaggatgtcattgagcaaggcatcatcagagcgatgacaggaaccaaagagaagacc
ggagtttacatccagcagatgccatacccctgctacgtggacgacatcttccttagggtg
atgagtcggtctatgccactcttcatgaccctggcctggatgtactctgtgtccatcatc
ctgaagagtgtggtgtacgagaaggaggcccgtctcaaggagacaatgaggatcatgggc
ctagataacggcatcctgtggttcagctggttcatcagcagcctgattcctctactgatc
agtgctggactgctggttctggtgctgaagatggggaacctgctgccctacagtgacccc
ggtatcatcttcctgttcctgggatcttatgctgttgtcaccatcatgcagtgtttcctt
atcagcacagtgttctctcgcgctaacctggcggctgcttgcggaggaataatctacttc
accctctacctgccttacgtgctctgcgtcgcctggcaggactacatcagttatggagcc
aaagtatttgctagcctgctgtcccctgtggcattcgggtttggttgcgagtactttgca
ttgtttgaggagcagggggttggcattcagtggaagaacctggtgtcgagtcctcttcag
gaggatgagttcagcctccgcaccaccatcattgtcatgtactttgactcctttttgtat
ggagtgctcacatggtacattgaagctgtctttccaggtcagtatgggatccctcggccc
tggtacttccccttcaccaagtcctactggtttggagaggatggaaagtccagcaacatt
cctttaaggagaaaaggaaatgcttcagctgtgtgtgtggaggaggagccaactcacctg
aagccaggagtctacatcgagaacttagtgaaagtttaccgtcatgggaagaaactggca
gtggatgggctgacacttggattctacgagggacaaatcacatctttcttgggacataac
ggagctggaaaaaccaccacaatgtccatcctgaccggcctgtttccgcccacttctggc
accgcctacatcctgggcaaagacatccggaccgatctgagcaccatcaggcagagtctg
ggtgtctgtcctcagcacaatgtgctcttcagcatgctgacagtggaggaacacatctgg
ttctacgctcggctgaaaggcctgtcggaggagcaggtgaaaagcgagattgaacatatt
ctgcaggacacagggctgccacacaaacgcaggtccaggaccagtactctctcagggggc
atgcagaggaaactgtcagtggccctggcctttgtcggggggtcaaaggtggtgatcctg
gatgagcccacggctggtgttgacccttatgctcggaggggaatctgggaccttctgttg
aaatacagacagggtcggaccatcctcctgtcaacacaccacatggacgaggcagacatc
ctgggagaccgcattgccatcatttcccacggcaagctgtgctgtgtgggctcatctcta
tacctgaagaaccagctggggacaggctactacctgacactagtgaaaaaaggcccagaa
ccatcactcagctcctgcaggaactcatccagcaccgtgtccttcaccaagaaggacgag
gacagcacctctgtcagcagcagtgatgcaggactcggcagtgaccatgaaagtgaggca
gcccccatcgagaacgggctggcagcatctgtttgtccctcctcgtttgtgcctccatat
gcgtctctggcatcagcactaatcctgaggcatgtcccagccgcccgcctggtggaggac
ctgggacacgagttgacgtacgttctgccatacagtgctgccaaagacggagcctttgtg
gagctcttcagagatctagacctgaagctgcaggaactgggcatctccagctacggagtg
tctgacaccacgctggaggagattttcctgaaagtggctgaagataatggagttgacact
gaagtaccttcagatggaacacttcctgttcggaggcggaggaggactcatgcctttggc
ggaggagatcatcagagctgcttaaggcctacatctgaggatgaggatgatggcaacgag
tccgaaggagatgctgactgcagggagtcagactggctgaaccgcactgatggtaaggga
tcctatcagatgagtgggtggagcctgaagaggcagcagtttgtggcactgatgtggaaa
cgcttcctgtatgctcgacgctctagaaagggtttcttcgctcagatagtacttcctgcc
gtgtttgtctgcattgctctggtcttcagcctcattgtgccgccgttcggaaagtatcca
agtctagaactgcagccgtggatgtatgaagaccaggtcacctttctcagtgatgatgcc
cctggagacgccaacatgcagaagctgctgaacgctctgatggacccgccgggtcttggg
actcgctgtatggatgggtattccatcccagaggccccctgtacaatgggtgatgaggac
tggcacacccctgatgtccccatgagtgtccaggagatgttcagcttcagaaactggacc
atggagaacccatctccagcctgtttctgcacctgtgatggcaagaagaggatgctgccg
gagtgtcctgcaggagctggaggtctccccccacctgagatcaaacttagtgcaaccgat
gctctgcagaacctgacaggaagaaacatctcagactacctggtgaaaacctatgctcag
atcattggaaagagcctgaagaacaaagtctgggtgaatgagttcaggtatggaggcttc
tcattgggtgccaggagcacacaggtcctcccaccagccaacgaagttgatgatgccatt
gagagagtccgaaagatctttgagttacaggagggcgccgctgcagacagattcctggac
aatctgtcaggattcatcaacggcctcgacaccaaaaacaatgtgaagatctggtttaac
aacaaaggttggcacagcgcagcagcgtttatcaacgtgatgagcaacagcattctgaga
gcaaacctgccgacgggttcggagcccagcagctacggcatcagcgccttcaatcaccca
ctgaacctgaccaaggagcagctgtcccaggttgcactggtaacaacctctgtggatgtc
ctggtgtccatctgtgtgatatttgctatgtcttttgttcctgcgagctttgtggtcttc
ctgatccaggagcgtgtcagtaaagccaaacacatgcagttcatcagcggtgtccatcca
ctgctctactgggtggccaacttcatgtgggatatgtgtaactactttgtcccggcgacg
ctcgtcatcctcatcttcatctgcttccaacaaaaagcctatgtgtcgtccagcaatctg
ccggtacttgcactgctgctgctgctttatggctggtccatcactcccctcatgtacccc
gcatcgttcttctttaagatccccagcacggcatatgttgtcctcaccagcatcaacatc
ctcattggcatcaacggcagcatctccaccttcgtcatggagctgtttggagaccatgaa
atcggcggcatcaatgatattctgaagaacgtcctcctcatcttccctcacttctgtctc
gggcgaggactgatcgacatggtgaagaaccaggcgatggcggatgctctggaaagattt
ggtgagaacaggttccgctctcctcttgagtgggacatggtgggaaagaacctgctcgcc
atggctgtggagggtgtcgtcttcttcatcatcaccatcctcatccagtatcggttctgt
atcaaacccaggcctgtcagtacactcaccaaattgggagcacttggagaagaagatgag
gatgtcgcccgagagagacacaggattgtccagggtcttggacagggagacatcctggag
ctgcggcaactcactaaggtgtttaagaggaagcagaagccagctgtagaccgactctgt
gttgggattccaccgggagagtgttttggtctgctcggagtgaatggagctggaaaaaca
actaccttcaagatgttgacaggagacacaatggtgaccagtggagaggcattcttggct
gggaaaagcatcctgagggaaatcgacgaggtgcaccaaaacatgggctactgtcctcag
tttgatgccatcaatgagctgctgacaggaagagagcatcttgagctgtacgccatcctc
agaggtgtcccggagaaggaagtgtgtgacgtggcagagtggggcatcaggaagttgagt
ttgttaaaatacgcagataaacgagcaggaagctacagcggaggaaacctgaggaagctg
tccacagccatctctctgattggagcgccccctgttgtgtttctggacgagcccaccaca
ggtatggaccccaaggcccgccgagccctatggaactgcatccacagtgtcatcaaggag
gggcgctccgtggtcctcacatcccatagcatggaagagtgcgaagctctgtgcacgagg
atggccatcatggtgaacggcaggttcagatgtctggggagcgtccaacacctgaagaac
aggtttggtgatgggtacaccatcatcctgcgggtggcgggacccgacccagaccttctg
cctgtcatgaagttcatcgagagcgagctgagcggcagcacgctgaaggagaagcaccgc
aacatgctgcagtaccagctgccatcttcactcacgtcactcgctcacatcttctccatc
ctcgccgagaacaaggacattctccggattgaggactactctgtcactcagaccactctg
gaccaggtcttcgtaaactttgcgaaggaccagagtgatgattatgtttccaaagatgcc
tcagtgagaaggaaggacgtgtccattgatgttgcagcgctgagctctacctgtgcagct
gctgagggaggtggagggcagcaggaaagcatcatgtga
DBGET
integrated database retrieval system
