Nothobranchius furzeri (turquoise killifish): 107381054
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Entry
107381054 CDS
T05163
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04080
Neuroactive ligand-receptor interaction
nfu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107381054
04082 Neuroactive ligand signaling
107381054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107381054
Ion channels [BR:
nfu04040
]
Ligand-gated channels
GABA-A
107381054
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Gene cluster
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
107381054
NCBI-ProteinID:
XP_015808026
UniProt:
A0A9D2Y7X9
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Position
sgr06:complement(60524887..60633721)
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AA seq
548 aa
AA seq
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MDPYRIRGVGMRRDMLRWGWMLLLFWPGFVFHIVQGELPFMSGNNAAMLVNWNVVDGSKK
LIAIYDTSVNESGNMSTVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVN
MDYTLTMYFQQYWRDKRLAYVGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR
MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESA
VTGVTRIELPQFSIVDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITI
LSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFL
ALLEYAFVNYIFFGRGPQMQKKLAEKAEKANNERAAKYDAAREAGSRTASLKRSNQVKGL
RHSRSAEPHGHGNILLTTLEITNEVAGGEITTSVADIRNSQSMVQLDSTASSHIQYRKQS
GGIGPRSTSRHSMDRSAQMKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFN
LIYWLYYV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacccctacaggatcaggggtgtaggaatgaggagggacatgctccgctgggggtgg
atgttactgcttttttggcctggatttgtatttcacattgtccaaggggaacttccattc
atgtctgggaacaacgctgctatgctggtcaactggaatgttgttgacggaagcaagaag
ttgatcgccatctatgacaccagcgtcaatgaatcgggcaacatgtccaccgtgaaggag
acggtggataaactcctgaagggctacgacatccgactgagaccggactttggaggaccc
cctgttgcagtcggcatgagcatagacgtggcgagcatagacatggtgtcagaagtcaac
atggactacaccttaactatgtatttccaacagtactggagggacaagcgtttggcctac
gtagggatccccctaaacctgactctggacaacagggtggctgaccagctctgggtccct
gacacctacttcctcaatgacaagaagtcttttgttcacggagtcactgtgaaaaatcgc
atgatccgcctgcatccagacggaaccgttctctatgggctaagaataactactacagct
gcttgcatgatggaccttaggaggtatcccctggatgaacagaactgcacgctggaaata
gagagctatggctacaccacagatgacattgagttctactggaaaggaggcgagtcggcc
gtaaccggggtgacgcgcatcgaactgccacagttctccatcgttgattacaaactagtg
tccaaaaatgtcgtcttttccacaggtgcctaccctcgactgtctctgagctttaagctg
aagaggaacatcggctacttcatcttgcaaacgtacatgccatcgatcctgattaccata
ctctcctgggtctccttttggattaactacgatgcgtcggcagccagagtggctctgggc
atcaccactgtgctgaccatgaccaccatcaacacccacttaagggagacactaccaaag
atcccttatgtgaaggccatcgacatgtacctgatgggttgcttcgtcatggtcttcctg
gcacttctagagtacgcctttgtcaactacatattcttcggaagggggcctcagatgcaa
aagaagttggcggaaaaggcagagaaggccaacaacgagagagcagccaaatatgatgca
gcaagggaggcaggtagtaggaccgcatccctaaaacggtccaatcaggttaaaggtcta
cgccactcacgctcggcagagcctcatggccacggaaacatcctactgaccaccctggag
atcacaaacgaagtggcaggaggtgagatcaccaccagtgtggcggacataagaaactct
cagtccatggtacagttggacagcacagcctcatcacacatccaataccgcaagcagagc
ggtgggatagggccacgctccaccagccgccactccatggaccggtctgcccagatgaaa
cgcagtcgcctacggaggcgatcctctcagctgaaaattaaaatccccgacctgacagat
gtgaacgccattgaccgctggtcgcgcatcatcttcccttctgttttttccctttttaac
ctcatctactggctctactacgtctga
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